Viruses: 1494058 Help Entry 1494058           CDS       T40000                                  Symbol TuMVgp1 Name (RefSeq) Turnip mosaic virus; polyprotein Virus 12230  Turnip mosaic virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Peptidase_C6 Poty_coat RdRP_1 Poty_PP Potyvirid-P3 Peptidase_S30 Peptidase_C4 DEAD Helicase_C Flavi_DEAD Trypsin_2 ResIII Cas3-like_C_2 CoV_nucleocap Peptidase_C3 ER Motif Other DBs NCBI-GeneID:  1494058 NCBI-ProteinID:  NP_062866 RS:  NC_002509 UniProt:  P89509 Structure PDBPDBj LinkDB All DBs Position NC_002509:131..9625 Genome browser AA seq 3164 aa AA seqDB search MAAVTFASAITNAITSKPALTGMVQFGSFPPMPLRSTTVTTVATSVAQPKLYTVQFGSLD PVVVKSGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVLRMHEEANKERALFLDW EASLKRSSYGIAEDEKVVMTTHGVSKIVPRSSRAMKLKRARERRRAQQPIILKWEPKLSG ISIGGGLSASVIEAEEVRTKWPLHKTPSMKKRTVHRICKMNDQGVDMLTRSLVKIFKTKS ANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLLTGMEENHFIDILSKYSGNK TTINPGVVCAGWSGIVVGNGILTQKRSRSPSEAFVIRGEHEGKLYDARIKVTRTMSHKIV HFSAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCLAMFPCGKITCPDC VTDSELSQGQASGPSMKHRLTQLRDVIKSSYPRFKHAVQILDRYEQSLSSANENYQDFAE IQSISDGVEKAAFPHVNKLNAILIKGATVTGEEFSQATKHLLEIARYLKNRTENIEKGSL KSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSNYFEIIDPKKGYTQYET RAVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECVSKLQGDFVHACCCVTTE SGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAKEGYCYINIFLAMLVNVKE SQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDVANAELPRMLVDHKTKIIHV VDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVGGTEWEDTHGSSNIDNPQWCI KRLIKGVYKPKQLKEDMLANPFLPLYALLSPGVILAFYNSGSLEYLMNHYIRVDSNVAVL LVVLKSLAKKVSTSQSVLAQLQIIERSLPELIEAKANVNGPDDAATRACNRFMGMLLHMA EPNWELADGGYTILRDHSISILEKSYLQILDEAWNELSWSERCAIRYYSSKQAIFTQKDL PMKSEADLGGRYSVSVMSSYERSKQCMKSVHSSIGNRLRSSMSWTSSKVSNSVCRTINYL VPDVFKFMNVLVCISLLIKMTAEANHIVTTQRRLKLDVEETERRKIEWELAFHHAILTQS AGQHPTIDEFRAYIADKAPHLSEHIEPEEKAVVHQAKRQSEQELERIIAFVALVLMMFDA ERSDCVTKILNKLKGLVATVEPTVYHQTLNDIEDDLSERNLFVDFELSSDGDMLQQLPAE KTFASWWSHQLSRGFTIPHYRTEGKFMTFTRATATEVAGKIAHESDKDILLMGAVGSGKS TGLPYHLSRKGNVLLLEPTRPLAENVHKQLSQAPFHQNTTLRMRGLTAFGSAPISVMTSG FALNYFANNRMRIEEFDFVIFDECHVHDANAMAMRCLLHECDYSGKIIKVSATPPGREVE FSTQYPVSISTEDTLSFQDFVNAQGSGSNCDVISKGDNILVYVASYNEVDALSKLLIERD FKVTKVDGRTMKVGNIEITTSGTPSKKHFIVATNIIENGVTLDIDVVADFGTKVLPYLDT DSRMLSTTKTSINYGERIQRLGRVGRHKPGHALRIGHTEKGLSEVPSCIATEAALKCFTY GLPVITNNVSTSILGNVTVKQARTMSVFEITPFYTSQVVRYDGSMHPQVHALLKRFKLRD SEIVLNKLAIPHRGVNAWLTASEYARLGANVEDRRDVRIPFMCRDIPEKLHLDMWDVIVK FKGDAGFGRLSSASASKVAYTLQTDVNSIQRTVTIIDTLIAEERRKQEYFKTVTSNCVSS SNFSLQSITNAIKSRMMKDHTCENISVLEGAKSQLLEFRNLNADHSFATKTDGISRHFMS EYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDVLVLCGVLGGGLWMVIQHLRSKMSEP VTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDTIEHFFGDAYTKKGKSKGRTRGIGHKN RKFINMYGFDPEDFSAVRFVDPLTGATLDDNPLTDITLVQEHFGNIRMDLLGEDELDSNE IRVNKTIQAYYMNNKTGKALKVDLTPHIPLKVCDLHATIAGFPERENELRQTGKAQPINI DEVPRANNELVPVDHESNSMFRGLRDYNPISNNICHLTNVSDGASNSLYGVGFGPLILTN RHLFERNNGELVIKSRHGEFVIKNTTQLHLLPIPDRDLLLIRLPKDVPPFPQKLGFRQPE KGERICMVGSNFQTKSITSIVSETSTIMPVENSQFWKHWISTKDGQCGSPMVSTKDGKIL GLHSLANFQNSINYFAAFPDDFAEKYLHTIEAHEWVKHWKYNTSAISWGSLNIQASQPSG LFKVSKLISDLDSTAVYAQTQQNRWMFEQLNGNLKAIAHCPSQLVTKHTVKGKCQMFDLY LKLHDEAREYFQPMLGQYQKSKLNREAYAKDLLKYATPIEAGNIDCDLFEKTVEIVVSDL RGYGFETCNYVTDENDIFEALNMKSAVGALYKGKKKDYFAEFTPEMKEEILKQSCERLFL GKMGVWNGSLKAELRPLEKVEANKTRTFTAAPLDTLLGGKVCVDDFNNQFYDHNLRAPWS VGMTKFYCGWDRLLESLPDGWVYCDADGSQFDSSLSPYLINAVLNIRLGFMEEWDIGEVM LRNLYTEIVYTPISTPDGTLVKKFKGNNSGQPSTVVDNTLMVILAVNYSLKKSGIPSELR DSIIRFFVNGDDLLLSVHPEYEYILDTMADNFRELGLKYTFDSRTREKGDLWFMSHQGHK REGIWIPKLEPERIVSILEWDRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQ APFSSLAQEGKAPYIAETALRKLYLDKEPAQEDLTHYLQAIFEDYEDGAEACVYHQAGET LDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKDVAQEEGKRDKEVNAGTSGTFS VPRLKSLTSKMRVPRYEKRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYEL TEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHF SDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAA ALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHNLLGVQGL NT seq 9495 nt NT seq  +upstreamnt  +downstreamnt atggcagcagttacattcgcatcagctatcaccaacgccatcaccagcaaaccagcactc accggaatggtgcagtttgggagtttcccaccaatgccattgcgatccaccaccgtcacc acagtcgccacttcagtggcgcaacctaaactgtacacagtgcagtttggaagccttgac ccagtagtcgtcaagagtggagcagggtcccttgctaaggcaacacgccagcagcctaac gttgaaatagacgttagcctcagtgaagccgcagctctggaggttgcgaaacctagatcg aatgccgtgttgaggatgcacgaggaagcaaacaaggagagagcactctttttggactgg gaggctagtttgaagagaagctcgtatggaattgctgaggacgagaaggttgtaatgaca actcatggcgtcagcaagatagtgcccagaagttcaagggcaatgaagctaaagcgcgca agggagaggcgtagagcgcagcaaccaattatattaaagtgggagcccaaattgagcggg atctcaatcggaggagggctctctgcgagcgtaatcgaagcagaagaggttcgcacaaag tggccgcttcataagacaccgtcaatgaagaagaggacggtgcacagaatatgcaagatg aacgaccaaggagttgacatgttgacacgatccctggttaagattttcaagactaagagt gccaacattgaatacatcggaaagaagtcgattaaggtcgatttcatcagaaaagaacga acgaaattcgcaagaatccaagtagcacacttactcgggaagagagcacagcgcgacttg ttaactggaatggaagaaaaccattttattgacattctcagtaagtactcaggtaacaaa acaaccataaatcctggagtagtttgcgcaggttggagtggcatagtcgttggaaatgga attctaacccagaaacgaagcagaagtccatcagaggcctttgtaattagaggtgagcac gaaggcaagttgtacgatgccaggatcaaagtcacgaggacaatgagtcacaagattgtg cactttagtgcagcaggagccaacttctggaaaggcttcgacagatgctttctcgcatac cgtagtgacaatcgcgagcatacatgctattcagggctagatgtcactgagtgcggcgag gtggcagcactgatgtgtttggctatgttcccatgcggaaagataacctgccctgactgt gtaacagatagtgagctatcccaaggacaagcaagcggaccatctatgaagcacaggttg acacagctacgcgatgtcatcaagtcaagctacccacgcttcaagcatgcagtgcagata ctagataggtatgagcaatcactgagcagtgcaaacgagaactaccaagatttcgcagaa atccagagcataagcgatggagttgaaaaagctgcattcccacacgtcaacaagctaaac gcaatattgatcaaaggggccacagtaacaggagaggaattctcgcaggctacgaagcac ttgctcgagatagcacgatacctgaagaacagaaccgagaacattgagaagggttcactg aagtcctttcgcaacaagatttcccagaaagcgcacatcaacccaacactaatgtgtgac aaccagctcgatagaaatggaaatttcatatggggtgagagaggataccatgcaaaacga ttcttcagcaactactttgaaataatcgatccaaagaaaggctacacccaatacgagaca agagcggtaccaaatgggtcacggaaacttgcaatcggcaaactaatagtcccaacgaac ttcgaagttttaagggaacagatgaaaggcgaaccggtagaaccatacccagtaacagtc gagtgtgtgagcaagttacagggtgacttcgtccatgcatgttgttgtgtcacaacagaa tcaggcgacccagtcttgtctgagatcaaaatgccaaccaaacaccatctagtgattggt aacagcggtgatccaaagtacatagatctccctgagatcgaggagaataaaatgtacata gcgaaagaaggttattgttacatcaatatcttcctagccatgttggtaaatgtcaaggag tcgcaggcaaaggagttcacgaaagttgttagggacaaactagttggcgaacttggcaag tggcccactctgttagatgtagcaaccgcttgttatttcctgaaagtattttacccagac gttgctaacgccgaattgccacgcatgctagtggaccataagacaaagataattcatgtc gttgattcatatgggtcactgtcaactggatatcatgtccttaagacaaacactgtggaa caactcatcaaattcacgagatgtaatttggagtcaagcttgaaacactaccgcgttgga ggaacagaatgggaggacactcatggatccagcaacatagataatccacagtggtgcatc aagaggctcataaaaggagtctacaaaccaaagcaactgaaagaagacatgttggcaaac cctttcttaccactatatgctctactgtcaccaggtgtcatcctggcattttacaatagt ggctctctagagtacttgatgaaccattacatcagggtggacagcaacgtcgccgttttg ttggtcgttttgaaatctctagcgaagaaggtgtcaactagtcagagtgtgttagcccag cttcaaatcattgaacgaagtctaccagaactcatcgaagcaaaggctaatgttaatggg ccagatgacgcagccactcgcgcgtgtaacagattcatgggcatgcttctgcatatggca gaaccaaactgggagcttgcggatggtggatacacaattctgagggatcatagcatctcc attttggaaaaaagttatctacaaatcttggacgaagcatggaacgagttaagttggtcg gagcgctgtgctataagatactactcgtcaaagcaagcaatctttacacagaaagatttg ccaatgaaaagcgaagccgatttaggcggcagatacagcgtgtcagtcatgtcatcttac gaacggagtaagcaatgtatgaaaagcgtgcactctagtataggtaatagattacgtagt agtatgtcttggactagtagcaaggtgtcgaatagtgtgtgtaggactattaactattta gtaccagatgtgttcaagtttatgaatgtactcgtttgtatcagcttactaatcaagatg actgccgaggcgaatcacatcgtcaccacgcaaagaaggctcaaactagatgtcgaggag acagagcgcaggaaaatagaatgggagcttgcattccaccatgccattctgacgcagagt gcaggtcaacacccaacgatagacgagttcagagcgtacatcgccgacaaggcaccacat ctaagtgagcatatcgagcctgaagaaaaggcggtggttcatcaagcgaagagacaatcc gagcaagaactcgagcgtataatagcatttgttgcattggtgctcatgatgttcgatgca gaacgaagcgactgtgtcacaaagattctcaacaagcttaagggactagtcgccactgtg gaacctacagtctaccatcagactctcaatgatatagaggatgacttgagtgagaggaac ctcttcgtcgattttgagcttagcagcgatggagatatgctccaacagcttccagccgaa aagacatttgcctcatggtggagtcatcaactaagcagaggattcacaatcccacactac aggacagaagggaagttcatgactttcaccagagcaactgccacggaagtcgcgggtaaa atagcacacgagagtgacaaagacatattactaatgggagcagtaggatcaggtaagtca actggcttgccatatcatctctccagaaaagggaacgtattactccttgagccgactcgg ccacttgcagaaaacgtacacaagcagttgtcgcaggcaccgttccatcagaacacaact cttaggatgcgcggactaacagcattcgggtcggcaccaatctcagtgatgaccagtggt tttgcactcaattactttgcaaacaacagaatgcgaattgaagaatttgactttgtcata tttgatgaatgtcacgttcatgacgccaatgcaatggcgatgagatgtttgctacatgag tgtgactattctggcaaaattatcaaagtttcagccacaccaccaggtcgagaagttgag ttctccactcaataccccgtgtcgataagcacagaagacacactatcgtttcaggatttt gtgaacgcacagggtagtggaagcaattgtgatgtgatttcaaaaggagacaatatcctc gtgtatgtagcaagctacaatgaggtagacgcgctttcaaaacttctaattgaaagagac ttcaaagtcacgaaggttgatggaagaacgatgaaagttggaaacatcgagatcaccaca agtggaacacctagtaagaagcacttcatagttgcaaccaacatcatagagaacggtgtt actctagacatcgatgtggttgctgattttggaacgaaggtactcccatatcttgataca gacagcagaatgctgagcacaactaagacaagcatcaattatggggaacgtatccaaagg ctaggaagagtcggaaggcacaagccaggtcacgctctgcgaataggtcacacagagaag gggttgagcgaagttccaagttgtattgcaacagaagcagctttaaagtgcttcacttat gggcttccagtgatcaccaacaacgtctcgacaagtattcttggtaatgtaacggtaaag caggcacgaacaatgtctgtatttgagataacaccgttctacacaagccaagtggtgaga tatgatggctccatgcatccacaggtgcacgcactcttaaagagattcaaactcagagac tctgagattgttttgaataaattagccatacctcaccgaggagtgaacgcttggctcaca gctagtgagtatgcacgacttggcgcgaatgttgaagataggcgtgacgttcgaattcct tttatgtgtcgcgacatcccagaaaaacttcatctagacatgtgggatgtgattgttaaa ttcaaaggtgatgcaggttttggtcggctttcaagcgccagtgcgagcaaggtagcttat actctacagacggacgtcaactccatacagcgaacagtcactatcatagatacactaatc gctgaggagagaaggaagcaggaatacttcaagacggtaacctccaactgtgtctcttct tcgaacttctcactgcagagcataacaaatgcgataaaatctcgtatgatgaaagatcac acgtgcgagaacatatcagtgcttgaaggagcgaagtcacagttactcgagtttagaaac ctgaatgctgatcactcatttgctacaaaaaccgatggaatatctcggcatttcatgagt gagtatggagctcttgaggcagttcaccatcaaaacaccagcgacatgagcaaattcctc aagcttaagggcaaatggaataaaacgctaatcacgcgagatgtgctggtactttgtgga gttcttggaggtggattgtggatggttattcagcacctgcggtcaaagatgtccgaaccc gtaacccatgaagcgaaaggtaagaggcaaaggcagaaactaaaatttcgcaatgcccga gacaacaaaatgggtagagaagtgtacggagatgatgataccatagagcatttcttcggt gatgcctacacaaagaaagggaagagcaagggtaggacacgtggtatcggacacaaaaac aggaagttcatcaacatgtatgggtttgatcctgaagatttctctgcagttcgtttcgtg gatccactcacaggagcgacgttggacgacaacccgctcacagacatcacccttgtgcaa gagcacttcggcaacataagaatggacttactcggggaggatgagctggactcaaatgaa atacgtgtgaataagactattcaagcctactacatgaacaataaaacaggcaaggctttg aaggtggatctgacaccacacatacctctcaaggtgtgtgatcttcacgcaaccattgct ggattcccagagcgagaaaacgagctgaggcagactggaaaggctcagcccatcaacata gacgaagtgccaagagctaacaacgaactcgtcccagtggaccacgagagtaactccatg ttcagagggttgcgtgactacaacccaatatcaaacaacatttgtcatctcacaaatgtt tcagatggagcatcaaactcgttatatggagtcggtttcggaccactcatattaacgaac cgacacctctttgagcggaataacggtgaactcgtaataaaatcacgacatggtgagttc gtgattaaaaacacaactcagctacacttgctaccgattccagacagagatcttctgcta atccggttaccaaaggacgtcccaccctttccacagaaattgggtttcaggcaacctgag aaaggtgaacgaatttgcatggtggggtccaatttccaaaccaagagcataacgagtata gtctctgagactagtacaataatgccagtggagaacagtcagttttggaaacactggatt agcactaaagacggccaatgcggaagtccaatggtgagcacgaaagacgggaaaatactc ggattacacagcctagcgaacttccagaactccatcaattactttgctgctttcccagat gattttgccgagaagtatcttcataccattgaagcacacgagtgggtcaagcactggaag tataacactagcgccatcagttggggctctttgaatatacaagcatcgcaaccgtccggc ttgttcaaagtaagcaagctaatctcagacctcgacagcacggcagtctacgcacaaacc cagcagaatcggtggatgttcgagcagctcaacgggaacctaaaagcgatagcacactgc cctagccagcttgtgacaaagcacacagttaaaggaaaatgtcagatgtttgacttgtat ctcaagttgcatgatgaagcacgagagtatttccaaccgatgctgggccagtatcaaaag agcaaactcaatcgagaagcatatgcaaaggatcttctgaaatatgcaacgccaatcgaa gcaggaaacatcgactgtgatctgtttgaaaagacagttgaaatagtcgtatcagatctg cgaggttatggtttcgaaacatgcaattatgtcactgatgagaatgacatattcgaagct cttaacatgaaatccgcagttggagcgttgtataaaggaaagaagaaggattacttcgct gagttcacacccgagatgaaagaagaaatactgaaacaaagttgtgaacggctcttccta ggaaagatgggagtgtggaacggctcgctgaaggcagagttgcgaccactagaaaaagtg gaagcaaacaaaacacggacgtttactgccgcaccactagacacactgttgggtggaaaa gtttgcgtggatgatttcaacaaccagttctatgatcacaaccttagagctccttggagc gttggcatgacaaagttttattgtggttgggatcgcttgttggagtcgttgccagatggt tgggtgtattgcgatgctgatggctcacagttcgacagctcgctatcgccatacttgatc aacgcagtactcaacatccgcttaggattcatggaagagtgggacataggggaggtaatg ctgagaaatttgtacaccgaaatcgtgtatacccctatttctacaccagatggtacactc gtcaagaagttcaaaggaaacaatagcggacagccatcgactgttgtggacaacacgctc atggtcatattggcagtcaactattcactcaagaaaagcggaattccaagtgagttgcgc gacagcatcatcagattcttcgtcaacggagatgatttactgctaagcgtacacccagag tatgagtatattcttgacactatggcagacaactttcgtgaactgggcctgaagtatact ttcgactcaagaaccagggaaaaaggagacctctggtttatgtcgcaccaggggcacaaa agagagggaatctggattcccaagctcgagccagagcgaatagtatcgattctagaatgg gatcggtcgaaagagccatgccatcgactagaggcaatctgcgcagcgatgattgagtcg tggggatacgacaagttaactcacgagatacgcaagttctacgcgtggatgattgaacaa gctccatttagctccctagcacaagaagggaaagctccttacatagcggaaacagcgctg aggaagctctaccttgataaggaaccagctcaagaggatctcacccattatttgcaagca atctttgaggattatgaagatggtgctgaggcttgtgtttatcaccaggcaggtgaaacg cttgatgcaggtttgacagacgagcaaaagcaggcagagaaggagaagaaggagagagag aaggcagaaaaggaacgagagaggcaaaagcagttggcactcaagaaaggcaaggatgtt gcacaagaagagggaaaacgcgacaaggaagtaaacgctggaacctctggaactttcagt gtacccagactcaagagtctgacaagcaagatgcgcgtgccaagatacgagaaaagagtg gctctaaacctcgatcatctaatcctatacacgccggagcagacggatctatccaacaca cgttcaacgcgaaagcagtttgacacatggtttgaaggtgtaatggctgattacgaactg acggaggacaaaatgcaaatcattctcaatggtttaatggtctggtgcattgagaacgga acctccccgaacataaacggaatgtgggtgatgatggacggcgacgatcaggtggaattc ccgatcaaaccgctcattgaccacgccaaacccacatttaggcagataatggcccatttc agtgacgtagctgaagcgtacattgaaaagcgtaaccaagaccgaccatacatgccacga tatggtcttcagcgcaatttaaccgacatgagcttagctcgatacgcatttgatttctat gaaatgacttctaggactccaatacgtgcgagagaggcacacatccagatgaaagcagca gcactgcgtggcgcaaataataatttgttcggcttggatggaaacgttggtacaacggta gagaacacggagaggcatacgaccgaggacgttaatcggaacatgcataacttactgggc gttcaggggttgtga

DBGET integrated database retrieval system