Viruses: 1494082
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Entry
1494082 CDS
T40000
Symbol
TMVgp1
Name
(RefSeq) Tobacco mosaic virus; Replicase
Virus
12242
Tobacco mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Vmethyltransf
Viral_helicase1
ToMV_Hel_N
AAA_19
RdRP_3
Spidroin_MaSp
Motif
Other DBs
NCBI-GeneID:
1494082
NCBI-ProteinID:
NP_597746
RS:
NC_001367
LinkDB
All DBs
Position
NC_001367:69..4919
Genome browser
AA seq
1616 aa
AA seq
DB search
MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVEEFNARDRRPKVNFSKVISEEQTL
IATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSLTYDIGGNFASHLFKGR
AYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERGGKTVPNFQKEAFDRYAEIPEDAVCH
NTFQTMRHQPMQQSGRVYAIALHSIYDIPADEFGAALLRKNVHTCYAAFHFSENLLLEDS
YVNLDEINACFSRDGDKLTFSFASESTLNYCHSYSNILKYVCKTYFPASNREVYMKEFLV
TRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAWHYKKTLAMCNSERILLEDSS
SVNYWFPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFVFTVLNHIRTYQAKALTYANVL
SFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLHTKLAVLKDDLLISKFSLGSKTV
CQHVWDEISLAFGNAFPSVKERLLNRKLIRVAGDALEIRVPDLYVTFHDRLVTEYKASVD
MPALDIRKKMEETEVMYNALSELSVLRESDKFDVDVFSQMCQSLEVDPMTAAKVIVAVMS
NESGLTLTFERPTEANVALALQDQEKASEGALVVTSREVEEPSMKGSMARGELQLAGLAG
DHPESSYSKNEEIESLEQFHMATADSLIRKQMSSIVYTGPIKVQQMKNFIDSLVASLSAA
VSNLVKILKDTAAIDLETRQKFGVLDVASRKWLIKPTAKSHAWGVVETHARKYHVALLEY
DEQGVVTCDDWRRVAVSSESVVYSDMAKLRTLRRLLRNGEPHVSSAKVVLVDGVPGCGKT
KEILSRVNFDEDLILVPGKQAAEMIRRRANSSGIIVATKDNVKTVDSFMMNFGKSTRCQF
KRLFIDEGLMLHTGCVNFLVAMSLCEIAYVYGDTQQIPYINRVSGFPYPAHFAKLEVDEV
ETRRTTLRCPADVTHYLNRRYEGFVMSTSSVKKSVSQEMVGGAAVINPISKPLHGKILTF
TQSDKEALLSRGYSDVHTVHEVQGETYSDVSLVRLTPTPVSIIAGDSPHVLVALSRHTCS
LKYYTVVMDPLVSIIRDLEKLSSYLLDMYKVDAGTQXQLQIDSVFKGSNLFVAAPKTGDI
SDMQFYYDKCLPGNSTMMNNFDAVTMRLTDISLNVKDCILDMSKSVAAPKDQIKPLIPMV
RTAAEMPRQTGLLENLVAMIKRNFNAPELSGIIDIENTASLVVDKFFDSYLLKEKRKPNK
NVSLFSRESLNRWLEKQEQVTIGQLADFDFVDLPAVDQYRHMIKAQPKQKLDTSIQTEYP
ALQTIVYHSKKINAIFGPLFSELTRQLLDSVDSSRFLFFTRKTPAQIEDFFGDLDSHVPM
DVLELDISKYDKSQNEFHCAVEYEIWRRLGFEDFLGEVWKQGHRKTTLKDYTAGIKTCIW
YQRKSGDVTTFIGNTVIIAACLASMLPMEKIIKGAFCGDDSLLYFPKGCEFPDVQHSANL
MWNFEAKLFKKQYGYFCGRYVIHHDRGCIVYYDPLKLISKLGAKHIKDWEHLEEFRRSLC
DVAVSLNNCAYYTQLDDAVWEVHKTAPPGSFVYKSLVKYLSDKVLFRSLFIDGSSC
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggcatacacacagacagctaccacatcagctttgctggacactgtccgaggaaacaac
tccttggtcaatgatctagcaaagcgtcgtctttacgacacagcggttgaagagtttaac
gctcgtgaccgcaggcccaaggtgaacttttcaaaagtaataagcgaggagcagacgctt
attgctacccgggcgtatccagaattccaaattacattttataacacgcaaaatgccgtg
cattcgcttgcaggtggattgcgatctttagaactggaatatctgatgatgcaaattccc
tacggatcattgacttatgacataggcgggaattttgcatcgcatctgttcaagggacga
gcatatgtacactgctgcatgcccaacctggacgttcgagacatcatgcggcacgaaggc
cagaaagacagtattgaactatacctttctaggctagagagaggggggaaaacagtcccc
aacttccaaaaggaagcatttgacagatacgcagaaattcctgaagacgctgtctgtcac
aatactttccagacaatgcgacatcagccgatgcagcaatcaggcagagtgtatgccatt
gcgctacacagcatatatgacataccagccgatgagttcggggcggcactcttgaggaaa
aatgtccatacgtgctatgccgctttccacttctctgagaacctgcttcttgaagattca
tacgtcaatttggacgaaatcaacgcgtgtttttcgcgcgatggagacaagttgaccttt
tcttttgcatcagagagtactcttaattattgtcatagttattctaatattcttaagtat
gtgtgcaaaacttacttcccggcctctaatagagaggtttacatgaaggagtttttagtc
accagagttaatacctggttttgtaagttttctagaatagatacttttcttttgtacaaa
ggtgtggcccataaaagtgtagatagtgagcagttttatactgcaatggaagacgcatgg
cattacaaaaagactcttgcaatgtgcaacagcgagagaatcctccttgaggattcatca
tcagtcaattactggtttcccaaaatgagggatatggtcatcgtaccattattcgacatt
tctttggagactagtaagaggacgcgcaaggaagtcttagtgtccaaggatttcgtgttt
acagtgcttaaccacattcgaacataccaggcgaaagctcttacatacgcaaatgttttg
tcctttgtcgaatcgattcgatcgagggtaatcattaacggtgtgacagcgaggtccgaa
tgggatgtggacaaatctttgttacaatccttgtccatgacgttttacctgcatactaag
cttgccgttctaaaggatgacttactgattagcaagtttagtctcggttcgaaaacggtg
tgccagcatgtgtgggatgagatttcgctggcgtttgggaacgcatttccctccgtgaaa
gagaggctcttgaacaggaaacttatcagagtggcaggcgacgcattagagatcagggtg
cctgatctatatgtgaccttccacgacagattagtgactgagtacaaggcctctgtggac
atgcctgcgcttgacattaggaagaagatggaagaaacggaagtgatgtacaatgcactt
tcagagttatcggtgttaagggagtctgacaaattcgatgttgatgttttttcccagatg
tgccaatctttggaagttgacccaatgacggcagcgaaggttatagtcgcggtcatgagc
aatgagagcggtctgactctcacatttgaacgacctactgaggcgaatgttgcgctagct
ttacaggatcaagagaaggcttcagaaggtgctttggtagttacctcaagagaagttgaa
gaaccgtccatgaagggttcgatggccagaggagagttacaattagctggtcttgctgga
gatcatccggagtcgtcctattctaagaacgaggagatagagtctttagagcagtttcat
atggcaacggcagattcgttaattcgtaagcagatgagctcgattgtgtacacgggtccg
attaaagttcagcaaatgaaaaactttatcgatagcctggtagcatcactatctgctgcg
gtgtcgaatctcgtcaagatcctcaaagatacagctgctattgaccttgaaacccgtcaa
aagtttggagtcttggatgttgcatctaggaagtggttaatcaaaccaacggccaagagt
catgcatggggtgttgttgaaacccacgcgaggaagtatcatgtggcgcttttggaatat
gatgagcagggtgtggtgacatgcgatgattggagaagagtagctgtcagctctgagtct
gttgtttattccgacatggcgaaactcagaactctgcgcagactgcttcgaaacggagaa
ccgcatgtcagtagcgcaaaggttgttcttgtggacggagttccgggctgtgggaaaacc
aaagaaattctttccagggttaattttgatgaagatctaattttagtacctgggaagcaa
gccgcggaaatgatcagaagacgtgcgaattcctcagggattattgtggccacgaaggac
aacgttaaaaccgttgattctttcatgatgaattttgggaaaagcacacgctgtcagttc
aagaggttattcattgatgaagggttgatgttgcatactggttgtgttaattttcttgtg
gcgatgtcattgtgcgaaattgcatatgtttacggagacacacagcagattccatacatc
aatagagtttcaggattcccgtaccccgcccattttgccaaattggaagttgacgaggtg
gagacacgcagaactactctccgttgtccagccgatgtcacacattatctgaacaggaga
tatgagggctttgtcatgagcacttcttcggttaaaaagtctgtttcgcaggagatggtc
ggcggagccgccgtgatcaatccgatctcaaaacccttgcatggcaagatcctgactttt
acccaatcggataaagaagctctgctttcaagagggtattcagatgttcacactgtgcat
gaagtgcaaggcgagacatactctgatgtttcactagttaggttaacccctacaccagtc
tccatcattgcaggagacagcccacatgttttggtcgcattgtcaaggcacacctgttcg
ctcaagtactacactgttgttatggatcctttagttagtatcattagagatctagagaaa
cttagctcgtacttgttagatatgtataaggtcgatgcaggaacacaatagcaattacag
attgactcggtgttcaaaggttccaatctttttgttgcagcgccaaagactggtgatatt
tctgatatgcagttttactatgataagtgtctcccaggcaacagcaccatgatgaataat
tttgatgctgttaccatgaggttgactgacatttcattgaatgtcaaagattgcatattg
gatatgtctaagtctgttgctgcgcctaaggatcaaatcaaaccactaatacctatggta
cgaacggcggcagaaatgccacgccagactggactattggaaaatttagtggcgatgatt
aaaaggaactttaacgcacccgagttgtctggcatcattgatattgaaaatactgcatct
ttagttgtagataagttttttgatagttatttgcttaaagaaaaaagaaaaccaaataaa
aatgtttctttgttcagtagagagtctctcaatagatggttagaaaagcaggaacaggta
acaataggccagctcgcagattttgattttgtagatttgccagcagttgatcagtacaga
cacatgattaaagcacaacccaagcaaaaattggacacttcaatccaaacggagtacccg
gctttgcagacgattgtgtaccattcaaaaaagatcaatgcaatatttggcccgttgttt
agtgagcttactaggcaattactggacagtgttgattcgagcagatttttgtttttcaca
agaaagacaccagcgcagattgaggatttcttcggagatctcgacagtcatgtgccgatg
gatgtcttggagctggatatatcaaaatacgacaaatctcagaatgaattccactgtgca
gtagaatacgagatctggcgaagattgggttttgaagacttcttgggagaagtttggaaa
caagggcatagaaagaccaccctcaaggattataccgcaggtataaaaacttgcatctgg
tatcaaagaaagagcggggacgtcacgacgttcattggaaacactgtgatcattgctgca
tgtttggcctcgatgcttccgatggagaaaataatcaaaggagccttttgcggtgacgat
agtctgctgtactttccaaagggttgtgagtttccggatgtgcaacactccgcgaatctt
atgtggaattttgaagcaaaactgtttaaaaaacagtatggatacttttgcggaagatat
gtaatacatcacgacagaggatgcattgtgtattacgatcccctaaagttgatctcgaaa
cttggtgctaaacacatcaaggattgggaacacttggaggagttcagaaggtctctttgt
gatgttgctgtttcgttgaacaattgtgcgtattacacacagttggacgacgctgtatgg
gaggttcataagaccgcccctccaggttcgtttgtttataaaagtctggtgaagtatttg
tctgataaagttctttttagaagtttgtttatagatggctctagttgttaa
DBGET
integrated database retrieval system
