Viruses: 1494422
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Entry
1494422 CDS
T40000
Symbol
LTSVgp2
Name
(RefSeq) Lucerne transient streak virus; polyprotein P2ab
Virus
12470
Lucerne transient streak virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_4
Peptidase_S39
RdRP_1
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
1494422
NCBI-ProteinID:
YP_007438849
RS:
NC_001696
UniProt:
L0MN56
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Position
NC_001696:join(534..1856,1856..3481)
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AA seq
982 aa
AA seq
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MTLKLWEALKVLVVVSSSSIAASLLLTSQVAAGGLDPMLQSPLALCVISMLVLIVRYAWQ
NMLLNSVEVRDETPPGMFINLVGEPKLIPEKGIVMDGVGEDGKVCKVIVNPQWWRFLPGS
AISKNGEDEAAVLDSVYSSVLTGTEPASLVLLKSGSQTVGFGARVSYEGCSDYLLTAYHV
IEPHEKLDLCKRGKVIPDLDLATTYDCEDKFAEFAMIKVPSNYWSRLGVGVAKLSALSKK
STVSLYGGTSSTGLTCSSGFAYKGKSGYAIVHEASTTKGWSGTPLYVGNNIVGVHTGCGK
AGETNRGTNVRVLLDLSSGYESDFSEISYGEIDLDNFRLRPNRQEYLPVTIKGKGRYLLG
DTDFVAMTEARVKRIDDWEALKDAEGPGRVKWSDWADEETSWIGRKMNNIYKAGVETIDL
WKGTDEPVESETTSQLLRHLNLPRGGHTGRCCTALINLAEYRWEQPIPISSRGMPLSEVG
RSNCKFREASGKATGDAVIAAGEIFPELKQYSWPKRGSEAERGSLLFQAGRFRPTSPPAN
LAESVRKLVSKYPATTVYKVLRGAEWSKEEIAKEARRIGETEVNPKASPGVPLSVLGQSN
AEVLSRHGDLVYIAVAERLIALSEADLEAHPKPSDLVRLGLCDPVRLFVKNEPHPANKVR
EGRFRLISSVSLVDQLVERLLFGPQNKAEIALWQSVPSKPGMGLSQKWQFEALWKDLQIK
HASAPAAEADISGFDWSVQKWELEADVCMRIERGNFPARMRKAALNRFKCFANAVFQLSN
GELIEQGLPGLMKSGSYCTSSTNSRIRCLMAEIIQAPWCIAMGDDSVEGYVEGARELYGE
LGHTCKDYIPCAAEGEILKEVNFCSHSIAADRCYLQSWAKTLFRYLEHPDDFEELAVELQ
GCPQWPRIYKYLRRIGRVSDKIPEPREENGREDEKSKQKEEEEQQHTEEDYGTQQAASYC
SEGHDPSRYFGGGEEVFPCNPL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgactttgaaactctgggaagctctcaaggttcttgtggtagtgtcgagcagctcgata
gctgcgagtctactacttacatcccaggtggcagcaggaggtttagacccgatgttgcaa
tccccattggctctgtgcgtcatatcgatgctggtgctgatcgtgcgatacgcctggcag
aacatgctgctaaactcagtagaggttagggatgaaactccccccggcatgttcatcaat
cttgtaggtgaacctaagttgatccctgaaaagggaatagttatggatggcgttggtgag
gacggcaaggtgtgtaaagtaatagtcaatcctcaatggtggcgttttcttcccggttct
gcgatatctaagaatggggaagacgaagctgcggttttggatagtgtatattctagcgtc
cttactggtacagagccagcttctttggttttgcttaaatcaggcagccaaactgttggt
tttggagcgcgtgttagttatgagggttgctcagattatctattgacggcataccatgtg
atcgagccacatgagaagttggacctgtgtaaacgggggaaggtcattccagatctggat
ttggccaccacttacgattgtgaggataaattcgcagaatttgctatgattaaggtgccg
agtaactactggtctagattgggcgtgggggttgcaaaactctctgcccttagcaagaag
tcaacagtttcactatatggtggtacgagctccactggtctcacttgctcttcgggattt
gcttataaaggcaagtctggttatgccatcgttcacgaggcatctaccaccaagggctgg
agcgggacccctttatatgttggcaacaacattgttggagttcacactggatgtgggaag
gccggcgaaaccaaccgcggaactaacgtccgggttttgcttgatcttagctctgggtat
gagtctgatttttccgagatctcctacggggaaattgatctggataattttagactcaga
cctaaccgccaagagtacctgccagtgactatcaaaggaaaaggaagatatttgttaggt
gacactgacttcgttgccatgacagaggctagagtcaaaagaatagatgactgggaagcc
ttaaaagatgctgaagggcctggaagggttaagtggtctgattgggctgatgaggaaacc
agctggataggaaggaaaatgaataacatctacaaagctggtgttgagactatagacttg
tggaaaggcacggacgaacccgttgagtctgagactacatcgcaactgttgaggcattta
aacctgccaaggggcgggcacaccggaaggtgttgcaccgccctcatcaaccttgcagag
taccgatgggagcaacccatccctatctcctcacggggtatgcctctttccgaagttgga
agatcgaattgtaaatttagagaagctagtggaaaagctactggagacgctgtcatcgca
gcaggtgaaatcttcccagagctcaaacagtacagctggcccaagcgaggtagtgaggca
gaaagaggatccctcctcttccaagccggacggttccgaccgaccagcccccccgccaac
ctcgccgagtcagtcagaaagctcgtctcaaaatacccagccacaacagtctacaaagtc
ctccggggggcagagtggagcaaagaagaaatcgcaaaggaggcgaggagaatcggagaa
acagaagtcaacccaaaagcctccccaggcgtcccgctctccgtcctgggtcaaagcaac
gccgaagtcttgagtaggcacggcgatcttgtgtacatagcagtagcagaaaggctaata
gcgctgtccgaggccgacttggaagcccatccgaagcccagcgatttagttcgtttgggt
ctttgtgatcctgtgagattgtttgtaaagaatgagcctcaccctgccaataaggtgcgg
gaagggcgatttagactgatctcatcggtatcgctggttgatcaactagttgaaaggctg
ctattcgggccccaaaacaaggcagagatcgctttgtggcagtcggtgccttcaaaacct
ggtatgggattgtcacagaagtggcagttcgaggcgctgtggaaagatttgcaaatcaaa
cacgccagtgcccccgctgctgaggcggatatatcgggttttgattggtctgtgcagaaa
tgggagttagaagctgatgtgtgcatgagaatagaaaggggaaacttccctgcaagaatg
aggaaagccgccttgaaccgcttcaagtgtttcgccaatgctgtgttccagctaagcaac
ggcgagttaatagagcaaggcttaccgggtctaatgaagtctggtagttattgtacctcg
agtactaacagccggataaggtgccttatggctgaaataatacaagccccgtggtgcatc
gccatgggagacgactcggtagaaggatatgttgagggggcccgtgagctctacggagaa
ctgggtcacacatgtaaagattacatcccgtgtgctgctgagggagagatcctcaaggaa
gtgaacttttgctcacacagcatagctgcggatcgttgctatctccaatcctgggctaaa
accttatttagatatctggaacaccctgacgactttgaggagttggcagtggaattgcag
ggctgtccgcagtggccgcggatatacaagtacttacgtcggattggaagagtctccgac
aaaattcccgaaccaagagaagaaaatggtcgcgaagacgagaagagcaaacagaaagaa
gaagaggaacaacaacacacagaggaggactacggaacccaacaggcagctagctactgc
tcggagggtcacgatcccagccgctacttcggtggtggtgaggaagtcttcccctgtaat
ccgctctga
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