Viruses: 1497253 Help Entry 1497253           CDS       T40000                                  Symbol BaMVgp1 Name (RefSeq) Bamboo mosaic virus; replicase   KO K26615   Alphaflexiviridae RNA-directed RNA polymerase Virus 35286  Bamboo mosaic virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Vmethyltransf Viral_helicase1 RdRP_2 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  1497253 NCBI-ProteinID:  NP_042582 RS:  NC_001642 UniProt:  Q65005 LinkDB All DBs Position NC_001642:95..4192 Genome browser AA seq 1365 aa AA seqDB search MALVSKVFDSITDPSLRAVLQEEAHSQVKQVLKDTALYSRYALLPTAANTLERYAIPHNP FSTKLHTHAAAKALENDLYRTASYLLPKERVSFLFMKPSKMQYFRRRGDVDTFINADIVA KDLARYPLETIYPRLPEITTKMAFIGDSLHYFQPEVLEHIFTSSPQLETLLATIVLPPEA TLRLKSLYPEIYTLHYMPQKFLYKPGGLSGGEYEHDYKDLTWLKIGHVTTASMCLTVDRV ESKAANHLLLIRRGRLKLSTYRSYDTPEPLVVVPKIFLPPKYNAQKPITKTKANSWILYV KSAGEPKIRDVWAKLRQTIANSELNQYEPAELLLLTNYFYVLGKLDSITSFETLLGDNIL KRLFRPAIAKIQELRHWVSGPTAFMQLYKALQLVDVDFTFEVTKNWETKQENHSEPELPK DAIDVLVQSLIGINYTDAATTEAANPKQQESGPKPYTNLPQPLQQTKCPEDTEVSASPEC KAAETAQETHKAGPSSNPALNTDQEAAPSEPTDSEERKCPTLRELPWKAWLKLLRGLGFQ GDLEQLDVEGDLIYPIKHIRHLPVEDFSGPITATLRKMNRMPCKYSPDIERAAAFARDVM SNKTGAILPKQSHEWKTTLKRKCKLAPRQTLISVIHGAGGSGKSRALQEYMRNNKEDPIV TILPTNELRADWKAKLPAHDPDMFMTFENALLIPKGNVVIMDDYTKLPRGYIEAYVQNSP MLDLLILTGDPRQSEHFESAEGNTINDLSPSPVVFSAYARYYINATHRNNQDLANALGVY SEKQGKTRISVSNHIEDGRHTLVPSQIKQRNYVSMGRKTSTYAGCQGITASRVQVIIDND TAKCSHQVLYTAFSRAADEIHFCNTMTDEKQFWAKVKCTPYLQAILNLTKEHSLPDPKPE PDEPLEPKAPVTHIAVENVVPLVEEITEPLPEKHDREIYSESTGHSNCIQTENEFIQAFQ HQQAKDETLFWATIEKRIVTSTPESNWTEFKTKRPLGDILWLAYKEAMCLPAEPIKFDPD LWWKCADEVQNKYLQKPLHMIKNGILRQSPDFGERHIALFLKSQWVKKNEKIGTVNVKAG QTIAAFYQSTVMIFGTMARYMRRVREKFCPKNILINCEIDQPTASKWVDTHWKFDRLAYT NDFEAYDQSQDGAMLQFEVMKARHHDLPADLIESYIELKLNAKIFLGTLGIMRLTGEGPT FDANTECNIAYTHARFHIPRGTAQLYAGDDCALNCEPEERESFKPLAAQFTLKSKPVTIR QGKGSWPEFCGNIITPYGYLKHPRKTWAALHKAKLQGKDELKKTATAYALDVLPTYELGD AIHDIFTDNELTFHYQTIRTLHTEAHTRVFANHDAIFGEEGLFSS NT seq 4098 nt NT seq  +upstreamnt  +downstreamnt atggcactcgtttctaaagtctttgacagcatcaccgacccatccttgagggctgtactc caagaggaagcgcactcccaagttaaacaagtgctcaaagacacagcgctctactccaga tacgccctcctccccactgctgcaaacacgcttgaacggtacgcaatccctcataacccg ttcagcacaaaattacacacacacgcagcagcaaaagcccttgagaatgacctctaccgg acggcctcatatctcctcccaaaagaaagagtgtcatttctttttatgaagccatctaag atgcaatatttccggagaagaggagatgtcgacaccttcatcaatgctgacatcgttgct aaagaccttgccaggtaccctctcgagactatctacccccgcctcccggaaatcacaaca aagatggcttttattggggacagcctgcattacttccagcctgaggtgctggagcacatt ttcacaagctccccacaactagagaccctgctcgccacgatcgtccttccccccgaagcc acactcaggcttaaaagtctatacccagaaatctacacgttgcactacatgccccaaaaa tttctctacaaacctgggggcctatcaggcggggaatacgaacatgattacaaggaccta acttggctgaagattgggcatgtcacaactgcttccatgtgcctcacagtcgaccgggtg gagtctaaagcggccaatcacttactactcatacggcgtggaaggctcaaactcagcact tacagatcttacgacacccctgagcccttagtcgtggtaccaaaaatattcctcccccca aagtataatgcacagaaaccaattactaagacgaaagcaaactcgtggattctctacgtt aaatcagctggggagccgaagattagggatgtttgggccaagctcaggcagacgatagcg aactctgaactcaaccaatacgagcctgcggaattgctgctactaaccaactacttctac gtgttgggcaagttggactccatcacgtccttcgaaactcttctcggggacaatatactc aagcgccttttcagaccggcgatagcaaaaatccaagaactcagacactgggttagtggc ccaacagccttcatgcaactctacaaagcgctgcaactcgtcgatgtagacttcactttt gaggtcactaagaactgggaaacaaaacaggagaaccacagcgaacccgaactcccaaaa gatgccattgacgtgctcgtccagtcgctcatcggcatcaattacacagacgcagcaact accgaagccgcaaaccctaaacaacaagaaagtggaccaaaaccctacaccaacctcccg cagccccttcagcaaaccaaatgccccgaggacacggaagtgtccgcatcaccagaatgc aaagcggctgaaactgcgcaagagacccacaaagcagggcccagttcaaaccccgctctc aacactgaccaagaggcagccccgtcagaacccacagacagcgaggagcggaagtgcccc acattgcgtgaactgccatggaaggcgtggctcaaactacttcggggccttggattccaa ggcgaccttgaacagttggacgtagagggggacctcatttacccaattaaacacatccgg cacttaccagttgaggatttcagtggcccgatcacagcgaccctgaggaaaatgaaccgg atgccatgcaaatactcccccgacattgaaagagcagccgcattcgcgcgagacgtgatg agcaataaaacaggggccatcctccccaaacaatcccacgaatggaagaccacacttaaa agaaaatgcaaacttgcccctcgacaaactcttatttccgtgatacatggcgcgggcggc agtggtaaatcaagagccctgcaagaatacatgaggaacaacaaggaggaccccatcgtc accatccttccgacgaatgagctaagggccgattggaaagctaaactgcccgctcatgac cctgacatgttcatgacattcgagaacgcgctgctgatcccaaaaggcaacgtagtcatc atggacgattacactaagctaccacgcgggtacatcgaggcgtacgtgcaaaactcccca atgctagacctgctcatactcacaggagaccccaggcaatccgaacacttcgaatcagcc gaagggaacacgatcaacgatctcagcccctctccagtcgtcttcagcgcgtacgcccgc tattacatcaacgcaactcacaggaacaaccaggacctagcgaacgccttgggggtttac tctgaaaaacaagggaaaacgcgaatatcagtcagtaaccatatagaagacgggcgccac acattagttcccagccaaatcaaacaaagaaactacgtctccatgggcaggaaaacttct acctatgcgggctgtcaagggataaccgcttcacgtgtacaggtcatcattgacaacgac actgcaaagtgctcacatcaggtcctatacacagctttttccagggccgcagacgaaata cacttctgcaacactatgaccgacgaaaaacaattttgggcgaaagtgaagtgtaccccg tacttacaagccatcctcaaccttacaaaggaacactctctgcctgacccgaagcctgag ccagatgaacccttggagcccaaagcccctgtcacccacattgctgtggaaaacgtggta ccgctagtggaagaaatcactgagcctcttccagagaagcatgaccgagagatctactca gaaagcaccggacactccaactgcatccaaaccgaaaacgagttcattcaggctttccaa caccaacaggcaaaggatgaaactctcttctgggccaccattgagaaacgcatagtcacc tcaacccctgaatcaaactggactgaattcaagacaaagaggcccctaggtgacatcttg tggctggcctacaaggaggctatgtgcttgccagcggagcccatcaaattcgacccagac ctttggtggaaatgtgccgatgaggtgcaaaataaatacctacaaaaaccccttcacatg atcaaaaacggaatactcagacaaagcccagactttggggagcgtcacatcgcgctattt ctaaagtcgcagtgggtaaagaaaaacgaaaaaattgggacagtcaacgttaaggctggt caaactatcgccgcgttctaccagagtactgtcatgatcttcggcacgatggcgcgctac atgcggcgtgtaagagaaaaattctgcccaaagaacatactaattaactgcgaaattgac cagcccacagcttcaaaatgggtggacacgcattggaaattcgacaggttggcatacaca aacgactttgaggcgtatgaccagtctcaagatggggccatgttgcaatttgaggtgatg aaagcaaggcaccatgatctgcctgctgatttgatcgagtcctacatcgaacttaagctg aacgccaaaatattcctaggcacccttggcatcatgagactcactggagaggggccaacc ttcgatgccaatactgaatgcaacatcgcctacacgcatgcccgattccacatacccaga ggcactgcacaactgtacgctggagacgattgcgccctcaactgcgaacctgaagagaga gaatcatttaaacctttagctgcgcagttcaccctcaaatcaaagccggtgaccataaga caaggaaaaggctcctggcccgagttctgtggcaatatcatcaccccttacggctacctc aaacatcctcggaaaacatgggctgcactgcacaaggccaaacttcaagggaaagatgaa ttgaagaaaaccgccacggcctatgcgctcgacgtgctaccaacgtacgaactaggggac gcaatacacgatatatttaccgacaacgagctgacattccactaccaaacaatcagaacc ctacacacagaagcccacactcgagtcttcgccaaccacgatgcaatctttggcgaagaa ggtttattctctagttaa

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