Viruses: 1502321 Help Entry 1502321           CDS       T40000                                  Symbol TEVgp1 Name (RefSeq) Tobacco etch virus; polyprotein Virus 12227  Tobacco etch virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Peptidase_C6 Poty_coat RdRP_1 Poty_PP Peptidase_S30 Potyvirid-P3 Peptidase_C4 Helicase_C DEAD Flavi_DEAD ResIII Cas3-like_C_2 Peptidase_C3 Asp23 Motif Other DBs NCBI-GeneID:  1502321 NCBI-ProteinID:  NP_062908 RS:  NC_001555 UniProt:  P04517 Structure PDBPDBj LinkDB All DBs Position NC_001555:144..9308 Genome browser AA seq 3054 aa AA seqDB search MALIFGTVNANILKEVFGGARMACVTSAHMAGANGSILKKAEETSRAIMHKPVIFGEDYI TEADLPYTPLHLEVDAEMERMYYLGRRALTHGKRRKVSVNNKRNRRRKVAKTYVGRDSIV EKIVVPHTERKVDTTAAVEDICNEATTQLVHNSMPKRKKQKNFLPATSLSNVYAQTWSIV RKRHMQVEIISKKSVRARVKRFEGSVQLFASVRHMYGERKRVDLRIDNWQQETLLDLAKR FKNERVDQSKLTFGSSGLVLRQGSYGPAHWYRHGMFIVRGRSDGMLVDARAKVTFAVCHS MTHYSDKSISEAFFIPYSKKFLELRPDGISHECTRGVSVERCGEVAAILTQALSPCGKIT CKRCMVETPDIVEGESGESVTNQGKLLAMLKEQYPDFPMAEKLLTRFLQQKSLVNTNLTA CVSVKQLIGDRKQAPFTHVLAVSEILFKGNKLTGADLEEASTHMLEIARFLNNRTENMRI GHLGSFRNKISSKAHVNNALMCDNQLDQNGNFIWGLRGAHAKRFLKGFFTEIDPNEGYDK YVIRKHIRGSRKLAIGNLIMSTDFQTLRQQIQGETIERKEIGNHCISMRNGNYVYPCCCV TLEDGKAQYSDLKHPTKRHLVIGNSGDSKYLDLPVLNEEKMYIANEGYCYMNIFFALLVN VKEEDAKDFTKFIRDTIVPKLGAWPTMQDVATACYLLSILYPDVLRAELPRILVDHDNKT MHVLDSYGSRTTGYHMLKMNTTSQLIEFVHSGLESEMKTYNVGGMNRDVVTQGAIEMLIK SIYKPHLMKQLLEEEPYIIVLAIVSPSILIAMYNSGTFEQALQMWLPNTMRLANLAAILS ALAQKLTLADLFVQQRNLINEYAQVILDNLIDGVRVNHSLSLAMEIVTIKLATQEMDMAL REGGYAVTSEKVHEMLEKNYVKALKDAWDELTWLEKFSAIRHSRKLLKFGRKPLIMKNTV DCGGHIDLSVKSLFKFHLELLKGTISRAVNGGARKVRVAKNAMTKGVFLKIYSMLPDVYK FITVSSVLSLLLTFLFQIDCMIRAHREAKVAAQLQKESEWDNIINRTFQYSKLENPIGYR STAEERLQSEHPEAFEYYKFCIGKEDLVEQAKQPEIAYFEKIIAFITLVLMAFDAERSDG VFKILNKFKGILSSTEREIIYTQSLDDYVTTFDDNMTINLELNMDELHKTSLPGVTFKQW WNNQISRGNVKPHYRTEGHFMEFTRDTAASVASEISHSPARDFLVRGAVGSGKSTGLPYH LSKRGRVLMLEPTRPLTDNMHKQLRSEPFNCFPTLRMRGKSTFGSSPITVMTSGFALHHF ARNIAEVKTYDFVIIDECHVNDASAIAFRNLLFEHEFEGKVLKVSATPPGREVEFTTQFP VKLKIEEALSFQEFVSLQGTGANADVISCGDNILVYVASYNDVDSLGKLLVQKGYKVSKI DGRTMKSGGTEIITEGTSVKKHFIVATNIIENGVTIDIDVVVDFGTKVVPVLDVDNRAVQ YNKTVVSYGERIQKLGRVGRHKEGVALRIGQTNKTLVEIPEMVATEAAFLCFMYNLPVTT QSVSTTLLENATLLQARTMAQFELSYFYTINFVRFDGSMHPVIHDKLKRFKLHTCETFLN KLAIPNKGLSSWLTSGEYKRLGYIAEDAGIRIPFVCKEIPDSLHEEIWHIVVAHKGDSGI GRLTSVQAAKVVYTLQTDVHSIARTLACINRRIADEQMKQSHFEAATGRAFSFTNYSIQS IFDTLKANYATKHTKENIAVLQQAKDQLLEFSNLAKDQDVTGIIQDFNHLETIYLQSDSE VAKHLKLKSHWNKSQITRDIIIALSVLIGGGWMLATYFKDKFNEPVYFQGKKNQKHKLKM REARGARGQYEVAAEPEALEHYFGSAYNNKGKRKGTTRGMGAKSRKFINMYGFDPTDFSY IRFVDPLTGHTIDESTNAPIDLVQHEFGKVRTRMLIDDEIEPQSLSTHTTIHAYLVNSGT KKVLKVDLTPHSSLRASEKSTAIMGFPERENELRQTGMAVPVAYDQLPPKNEDLTFEGES LFKGPRDYNPISSTICHLTNESDGHTTSLYGIGFGPFIITNKHLFRRNNGTLLVQSLHGV FKVKNTTTLQQHLIDGRDMIIIRMPKDFPPFPQKLKFREPQREERICLVTTNFQTKSMSS MVSDTSCTFPSSDGIFWKHWIQTKDGQCGSPLVSTRDGFIVGIHSASNFTNTNNYFTSVP KNFMELLTNQEAQQWVSGWRLNADSVLWGGHKVFMSKPEEPFQPVKEATQLMNELVYSQG EKRKWVVEALSGNLRPVAECPSQLVTKHVVKGKCPLFELYLQLNPEKEAYFKPMMGAYKP SRLNREAFLKDILKYASEIEIGNVDCDLLELAISMLVTKLKALGFPTVNYITDPEEIFSA LNMKAAMGALYKGKKKEALSELTLDEQEAMLKASCLRLYTGKLGIWNGSLKAELRPIEKV ENNKTRTFTAAPIDTLLAGKVCVDDFNNQFYDLNIKAPWTVGMTKFYQGWNELMEALPSG WVYCDADGSQFDSSLTPFLINAVLKVRLAFMEEWDIGEQMLRNLYTEIVYTPILTPDGTI IKKHKGNNSGQPSTVVDNTLMVIIAMLYTCEKCGINKEEIVYYVNGDDLLIAIHPDKAER LSRFKESFGELGLKYEFDCTTRDKTQLWFMSHRALERDGMYIPKLEEERIVSILEWDRSK EPSHRLEAICASMIEAWGYDKLVEEIRNFYAWVLEQAPYSQLAEEGKAPYLAETALKFLY TSQHGTNSEIEEYLKVLYDYDIPTTENLYFQSGTVDAGADAGKKKDQKDDKVAEQASKDR DVNAGTSGTFSVPRINAMATKLQYPRMRGEVVVNLNHLLGYKPQQIDLSNARATHEQFAA WHQAVMTAYGVNEEQMKILLNGFMVWCIENGTSPNLNGTWVMMDGEDQVSYPLKPMVENA QPTLRQIMTHFSDLAEAYIEMRNRERPYMPRYGLQRNITDMSLSRYAFDFYELTSKTPVR AREAHMQMKAAAVRNSGTRLFGLDGNVGTAEEDTERHTAHDVNRNMHTLLGVRQ NT seq 9165 nt NT seq  +upstreamnt  +downstreamnt atggcactcatctttggcacagtcaacgctaacatcctgaaggaagtgttcggtggagct cgtatggcttgcgttaccagcgcacatatggctggagcgaatggaagcattttgaagaag gcagaagagacctctcgtgcaatcatgcacaaaccagtgatcttcggagaagactacatt accgaggcagacttgccttacacaccactccatttagaggtcgatgctgaaatggagcgg atgtattatcttggtcgtcgcgcgctcacccatggcaagagacgcaaagtttctgtgaat aacaagaggaacaggagaaggaaagtggccaaaacgtacgtggggcgtgattccattgtt gagaagattgtagtgccccacaccgagagaaaggttgataccacagcagcagtggaagac atttgcaatgaagctaccactcaacttgtgcataatagtatgccaaagcgtaagaagcag aaaaacttcttgcccgccacttcactaagtaacgtgtatgcccaaacttggagcatagtg cgcaaacgccatatgcaggtggagatcattagcaagaagagcgtccgagcgagggtcaag agatttgagggctcggtgcaattgttcgcaagtgtgcgtcacatgtatggcgagaggaaa agggtggacttacgtattgacaactggcagcaagagacacttctagaccttgctaaaaga tttaagaatgagagagtggatcaatcgaagctcacttttggttcaagtggcctagttttg aggcaaggctcgtacggacctgcgcattggtatcgacatggtatgttcattgtacgcggt cggtcggatgggatgttggtggatgctcgtgcgaaggtaacgttcgctgtttgtcactca atgacacattatagcgacaaatcaatctctgaggcattcttcataccatactctaagaaa ttcttggagttgagaccagatggaatctcccatgagtgtacaagaggagtatcagttgag cggtgcggtgaggtggctgcaatcctgacacaagcactttcaccgtgtggtaagatcaca tgcaaacgttgcatggttgaaacacctgacattgttgagggtgagtcgggagaaagtgtc accaaccaaggtaagctcctagcaatgctgaaagaacagtatccagatttcccaatggcc gagaaactactcacaaggtttttgcaacagaaatcactagtaaatacaaatttgacagcc tgcgtgagcgtcaaacaactcattggtgaccgcaaacaagctccattcacacacgtactg gctgtcagcgaaattctgtttaaaggcaataaactaacaggggctgatctcgaagaggca agcacacatatgcttgaaatagcaaggttcttgaacaatcgcactgaaaatatgcgcatt ggccaccttggttctttcagaaataaaatctcatcgaaggcccatgtgaataacgcactc atgtgtgataatcaacttgatcagaatgggaattttatttggggactaaggggtgcacac gcaaagaggtttcttaaaggatttttcactgagattgacccaaatgaaggatacgataag tatgttatcaggaaacatatcaggggtagcagaaagctagcaattggcaatttgataatg tcaactgacttccagacgctcaggcaacaaattcaaggcgaaactattgagcgtaaagaa attgggaatcactgcatttcaatgcggaatggtaattacgtgtacccatgttgttgtgtt actcttgaagatggtaaggctcaatattcggatctaaagcacccaacgaagagacatctg gtcattggcaactctggcgattcaaagtacctagaccttccagttctcaatgaagagaaa atgtatatagctaatgaaggttattgctacatgaacattttctttgctctactagtgaat gtcaaggaagaggatgcaaaggacttcaccaagtttataagggacacaattgttccaaag cttggagcgtggccaacaatgcaagatgttgcaactgcatgctacttactttccattctt tacccagatgtcctgagagctgaactacccagaattttggttgatcatgacaacaaaaca atgcatgttttggattcgtatgggtctagaacgacaggataccacatgttgaaaatgaac acaacatcccagctaattgaattcgttcattcaggtttggaatccgaaatgaaaacttac aatgttggagggatgaaccgagatgtggtcacacaaggtgcaattgagatgttgatcaag tctatatacaaaccacatctcatgaagcagttacttgaggaagagccatacataattgtc ctggcaatagtctccccttcaattttaattgccatgtacaactctggaacttttgagcag gcgttacaaatgtggttgccaaatacaatgaggttagctaacctcgctgccatcttgtca gccttagcgcaaaagttaactttggcagatttgttcgtccagcagcgtaatttgattaat gagtatgcgcaggtaattttggacaatctgattgacggtgtcagggttaatcattcgcta tccctagcaatggaaattgttactattaagctggccacccaagagatggacatggcgttg agggaaggtggctatgctgtgacctctgaaaaggtgcatgaaatgttggaaaaaaactat gtaaaggctttgaaggatgcatgggacgaattaacttggttggaaaaattctccgcaatc aggcattcaagaaagctcttgaaatttgggcgaaagcctttaatcatgaaaaacaccgta gattgcggcggacatatagacttgtctgtgaaatcgcttttcaagttccacttggaactc ctgaagggaaccatctcaagagccgtaaatggtggcgcaagaaaggtaagagtagcgaag aatgccatgacaaaaggggtttttctcaaaatctacagcatgcttcctgacgtctacaag tttatcacagtctcgagtgtcctttccttgttgttgacattcttatttcaaattgactgc atgataagggcacaccgagaggcgaaggttgctgcacagttgcagaaagagagcgagtgg gacaatatcatcaatagaactttccagtattctaagcttgaaaatcctattggctatcgc tctacagcggaggaaagactccaatcagaacaccccgaggctttcgagtactacaagttt tgcattggaaaggaagacctcgttgaacaggcaaaacaaccggagatagcatactttgaa aagattatagctttcatcacacttgtattaatggcttttgacgctgagcggagtgatgga gtgttcaagatactcaataagttcaaaggaatactgagctcaacggagagggagatcatc tacacgcagagtttggatgattacgttacaacctttgatgacaatatgacaatcaacctc gagttgaatatggatgaactccacaagacgagccttcctggagtcacttttaagcaatgg tggaacaaccaaatcagccgaggcaacgtgaagccacattatagaactgaggggcacttc atggagtttaccagagatactgcggcatcggttgccagcgagatatcacactcacccgca agagattttcttgtgagaggtgctgttggatctggaaaatccacaggacttccataccat ttatcaaagagagggagagtgttaatgcttgagcctaccagaccactcacagataacatg cacaagcaactgagaagtgaaccatttaactgcttcccaactttgaggatgagagggaag tcaacttttgggtcatcaccgatcacagtcatgactagtggattcgctttacaccacttt gcacgaaacatagctgaggtaaaaacatacgattttgtcataattgatgaatgtcatgtg aatgatgcttctgctatagcgtttaggaatctactgtttgaacatgaatttgaaggaaaa gtcctcaaagtgtcagccacaccaccaggtagagaagttgaatttacaactcagtttccc gtgaaactcaagatagaagaggctcttagctttcaggaatttgtaagtttacaagggaca ggtgccaacgccgatgtgattagttgtggcgacaacatactagtatatgttgctagctac aatgatgttgatagtcttggcaagctccttgtgcaaaagggatacaaagtgtcgaagatt gatggaagaacaatgaagagtggaggaactgaaataatcactgaaggtacttcagtgaaa aagcatttcatagtcgcaactaacattattgagaatggtgtaaccattgacattgatgta gttgtggattttgggactaaggttgtaccagttttggatgtggacaatagagcggtgcag tacaacaaaactgtggtgagttatggggagcgcatccaaaaactcggtagagttgggcga cacaaggaaggagtagcacttcgaattggccaaacaaataaaacactggttgaaattcca gaaatggttgccactgaagctgcctttctatgcttcatgtacaatttgccagtgacaaca cagagtgtttcaaccacactgctggaaaatgccacattattacaagctagaactatggca cagtttgagctatcatatttttacacaattaattttgtgcgatttgatggtagtatgcat ccagtcatacatgacaagctgaagcgctttaagctacacacttgtgagacattcctcaat aagttggcgatcccaaataaaggcttatcctcttggcttacgagtggagagtataagcga cttggttacatagcagaggatgctggcataagaatcccattcgtgtgcaaagaaattcca gactccttgcatgaggaaatttggcacattgtagtcgcccataaaggtgactcgggtatt gggaggctcactagcgtacaggcagcaaaggttgtttatactctgcaaacggatgtgcac tcaattgcgaggactctagcatgcatcaatagacgcatagcagatgaacaaatgaagcag agtcattttgaagccgcaactgggagagcattttccttcacaaattactcaatacaaagc atatttgacacgctgaaagcaaattatgctacaaagcatacgaaagaaaatattgcagtg cttcagcaggcaaaagatcaattgctagagttttcgaacctagcaaaggatcaagatgtc acgggtatcatccaagacttcaatcacctggaaactatctatctccaatcagatagcgaa gtggctaagcatctgaagcttaaaagtcactggaataaaagccaaatcactagggacatc ataatagctttgtctgtgttaattggtggtggatggatgcttgcaacgtacttcaaggac aagttcaatgaaccagtctatttccaagggaagaagaatcagaagcacaagcttaagatg agagaggcgcgtggggctagagggcaatatgaggttgcagcggagccagaggcgctagaa cattactttggaagcgcatataataacaaaggaaagcgcaagggcaccacgagaggaatg ggtgcaaagtctcggaaattcataaacatgtatgggtttgatccaactgatttttcatac attaggtttgtggatccattgacaggtcacactattgatgagtccacaaacgcacctatt gatttagtgcagcatgagtttggaaaggttagaacacgcatgttaattgacgatgagata gagcctcaaagtcttagcacccacaccacaatccatgcttatttggtgaatagtggcacg aagaaagttcttaaggttgatttaacaccacactcgtcgctacgtgcgagtgagaaatca acagcaataatgggatttcctgaaagggagaatgaattgcgtcaaaccggcatggcagtg ccagtggcttatgatcaattgccaccaaagaatgaggacttgacgtttgaaggagaaagc ttgtttaagggaccacgtgattacaacccgatatcgagcaccatttgtcatttgacgaat gaatctgatgggcacacaacatcgttgtatggtattggatttggtcccttcatcattaca aacaagcacttgtttagaagaaataatggaacactgttggtccaatcactacatggtgta ttcaaggtcaagaacaccacgactttgcaacaacacctcattgatgggagggacatgata attattcgcatgcctaaggatttcccaccatttcctcaaaagctgaaatttagagagcca caaagggaagagcgcatatgtcttgtgacaaccaacttccaaactaagagcatgtctagc atggtgtcagacactagttgcacattcccttcatctgatggcatattctggaagcattgg attcaaaccaaggatgggcagtgtggcagtccattagtatcaactagagatgggttcatt gttggtatacactcagcatcgaatttcaccaacacaaacaattatttcacaagcgtgccg aaaaacttcatggaattgttgacaaatcaggaggcgcagcagtgggttagtggttggcga ttaaatgctgactcagtattgtgggggggccataaagttttcatgagcaaacctgaagag ccttttcagccagttaaggaagcgactcaactcatgaatgaattggtgtactcgcaaggg gagaagaggaaatgggtcgtggaagcactgtcagggaacttgaggccagtggctgagtgt cccagtcagttagtcacaaagcatgtggttaaaggaaagtgtcccctctttgagctctac ttgcagttgaatccagaaaaggaagcatattttaaaccgatgatgggagcatataagcca agtcgacttaatagagaggcgttcctcaaggacattctaaaatatgctagtgaaattgag attgggaatgtggattgtgacttgctggagcttgcaataagcatgctcgtcacaaagctc aaggcgttaggattcccaactgtgaactacatcactgacccagaggaaatttttagtgca ttgaatatgaaagcagctatgggagcactatacaaaggcaagaagaaagaagctctcagc gagctcacactagatgagcaggaggcaatgctcaaagcaagttgcctgcgactgtatacg ggaaagttgggaatttggaatggctcattgaaagcagagttgcgtccaattgagaaggtt gaaaacaacaaaacgcgaactttcacagcagcaccaatagacactcttcttgctggtaaa gtttgcgtggatgatttcaacaatcaattttatgatctcaacataaaggcaccatggaca gttggtatgactaagttttatcaggggtggaatgaattgatggaggctttaccaagtggg tgggtgtattgtgacgctgatggttcgcaattcgacagttccttgactccattcctcatt aatgctgtattgaaagtgcgacttgccttcatggaggaatgggatattggtgagcaaatg ctgcgaaatttgtacactgagatagtgtatacaccaatcctcacaccggatggtactatc attaagaagcataaaggcaacaatagcgggcaaccttcaacagtggtggacaacacactc atggtcattattgcaatgttatacacatgtgagaagtgtggaatcaacaaggaagagatt gtgtattacgtcaatggcgatgacctattgattgccattcacccagataaagctgagagg ttgagtagattcaaagaatctttcggagagttgggcctgaaatatgaatttgactgtacc accagggacaagacacagttgtggttcatgtcacacagggctttggagagggatggcatg tatataccaaagctagaagaagaaaggattgtttctattttggaatgggacagatccaaa gagccgtcacataggcttgaagccatctgtgcatcaatgattgaagcatggggttatgac aagctggttgaagaaatccgcaatttctatgcatgggttttggaacaagcgccgtattca cagcttgcagaagaaggaaaggcgccatatctggctgagactgcgcttaagtttttgtac acatctcagcacggaacaaactctgagatagaagagtatttaaaagtgttgtatgattac gatattccaacgactgagaatctttattttcagagtggcactgtggatgctggtgctgac gctggtaagaagaaagatcaaaaggatgataaagtcgctgagcaggcttcaaaggatagg gatgttaatgctggaacttcaggaacattctcagttccacgaataaatgctatggccaca aaacttcaatatccaaggatgaggggagaggtggttgtaaacttgaatcaccttttagga tacaagccacagcaaattgatttgtcaaatgctcgagccacacatgagcagtttgccgcg tggcatcaggcagtgatgacagcctatggagtgaatgaagagcaaatgaaaatattgcta aatggatttatggtgtggtgcatagaaaatgggacttccccaaatttgaacggaacttgg gttatgatggatggtgaggatcaagtttcatacccgctgaaaccaatggttgaaaacgcg cagccaacactgaggcaaattatgacacacttcagtgacctggctgaagcgtatattgag atgaggaatagggagcgaccatacatgcctaggtatggtctacagagaaacattacagac atgagtttgtcacgctatgcgttcgacttctatgagctaacttcaaaaacacctgttaga gcgagggaggcgcatatgcaaatgaaagctgctgcagtacgaaacagtggaactaggtta tttggtcttgatggcaacgtgggtactgcagaggaagacactgaacggcacacagcgcac gatgtgaaccgtaacatgcacacactattaggggtccgccagtga

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