Viruses: 15464100
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Entry
15464100 CDS
T40000
Symbol
CfMVp2
Name
(RefSeq) Cocksfoot mottle virus; polyprotein P2ab
Virus
40979
Cocksfoot mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_4
RdRP_1
Peptidase_S39
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
15464100
NCBI-ProteinID:
NP_941957
RS:
NC_002618
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Position
NC_002618:join(429..1640,1640..3256)
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AA seq
942 aa
AA seq
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MGCSVVGNCKSVMLMSRMSWSKLALLVSVAMAAAMTDSPPTLICMGILVSVVLNWIVCAV
WQEASELILGVSLEATRPSPARVIGEPVFDPRYGYVAPAIYDGKSFDVILPISALSSAST
RKETVEMAVENSRLQPLESSQTPKSLVALYSQDLLSGWGSRIKGPDGQEYLLTALHVWET
NISHLCKDGKKVPISGCPIVASSADSDLDFVLVSVPRNAWSVLGVGVARLELLKRRTVVT
VYGGLDSKTTYCATGVAELENPFRIVTKVTTTGGWSGSPLYHKDAIVGLHLGARPSAGVN
RACNVAMAFRVVRKFVTVENSELYPDQSSGPARELDAETYTERLEQGIAFTEYNISGITV
KTSDREWTTAEALRVARYKPLGGGKAWGDSDDEDTQETAIRPLNLPAGGLPTGQSALGQL
IEYAGYVWRDEGIINSNGMPFRSAGKSSCRFREAVCRAVHRDVRAAETEFPELKELAWPS
RGSKAEIGSLLFQAGRFERVEAPANLQLAITNLQAQYPRSRPRSCFRREPWCREDFVAEI
EKIAHSGEINLKASPGVPLAEIGVSNQQVIDVAWPLVCEAVVERLHALASVDPRQHDWSP
EELVKRGLCDPVRLFVKQEPHSRQKIEQGRFRLISSVSLVDQLVERMLFGPQNTTEIALW
HSNPSKPGMGLSKASQVALLWEDLARKHQTHPGAMADISGFDWSVQDWELWADVSMRIEL
GSFPALMAKAAISRFYCLMNATFQLTNGELLAQELPGLMKSGSYCTSSSNSRIRCLMAEL
IGSPWCIAMGDDSVEGWVDDAPRKYSALGHLCKEYEACPVLPNGDLKEVSFCSHLISKGR
AELETWPKCLFRYLSGPHDVESLEMELSSSRRWGQIVRYLRRIGRVSGNDGEERSSNESP
ATTKTQGSAAAWGPPQEAWPVDGASLSTFEPSSSGWFHLEGW
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggttgttctgttgttggaaactgcaagtccgtgatgttgatgagcaggatgagctgg
tcaaagctagctctcctcgtatccgtcgcaatggcggcagccatgacagactccccaccc
actctgatatgtatggggatcctagtgagcgtggtgctcaactggatcgtctgcgcagta
tggcaagaagcttcagagctaattctgggcgtttccttggaagcgactcgtcctagtccc
gcacgggtcataggagagccggtctttgacccccggtatggctatgttgctcctgctatc
tatgatggcaagtcgtttgacgtgatcctgcctatttccgctctgtcctccgcttcaaca
aggaaggagacagtagagatggcagttgagaactcacggctacagcctctggaaagcagt
caaacgccgaagtccctagtggctttgtactcgcaggatctgctatcaggctggggttcc
cggattaaaggccctgatggccaggaatacctcttgacagccctgcatgtgtgggagacc
aacatctctcacctttgcaaggacggaaagaaggtaccgataagcggatgcccaatcgtt
gcgagctctgctgattcggacttggactttgtccttgtgtccgtgccgaggaacgcttgg
tctgttctaggcgtcggtgtggctcgtttggaattgctcaaacgccgaaccgtcgtaaca
gtctatggaggcctagactcaaagaccacctactgtgccactggtgtggcggagttggaa
aatcccttccgcatagtcacgaaagtgacgacaacgggggggtggtcaggctctccactc
taccacaaggacgcaatcgtcgggttgcacttgggtgcgagaccatctgcgggggtcaat
agagcgtgtaacgtggctatggcctttagggttgtgcggaaatttgtcactgttgaaaac
agtgagttatatcccgaccaaagcagtggccccgcccgagagcttgatgctgagacatac
acggaaaggctagagcaaggaattgcttttactgagtacaatatatccggcattacggtg
aaaacctccgaccgagagtggacaacagctgaggcgttgcgtgtcgcaagatacaaaccc
ttgggtggaggaaaagcatggggtgatagtgatgacgaggacacccaagaaactgcaatc
cggcctttaaacctaccagcgggcgggctccctacggggcagtccgcccttggccaactt
atcgagtacgcgggctacgtctggcgtgacgaaggaatcatcaattccaacggcatgcct
ttccgatccgctggaaagtcgagttgccggtttagagaagctgtgtgcagagcggttcac
agagatgttcgagctgctgagacagagttcccagaactcaaagagctcgcctggccaagc
cgcggatcaaaagcagaaatcggatcgctcctcttccaagccggcaggtttgagagagtc
gaagcgcccgccaatctgcaattggcaatcactaacctccaagcccagtacccgaggtcc
agaccccgctcctgcttccgcagagagccctggtgtcgcgaagacttcgtcgcagaaatc
gaaaagatcgcgcactcgggggaaatcaacctcaaagcaagtcccggcgtccccctcgcc
gaaatcggggtcagcaaccagcaagtaattgatgtagcttggcccttggtgtgtgaggct
gtggtggaaaggctccatgccttggcatccgtagacccgcgccagcacgattggtctcca
gaagaactcgtgaaaagaggattgtgcgatccagtgagactctttgtcaaacaggaacct
cattctcgacagaagattgaacaaggtcgcttccgacttatctcttctgtctcacttgta
gatcaactggtagaacgcatgcttttcggaccccagaataccacagagattgctttgtgg
cattcaaatccctctaaacccgggatgggtctgtcgaaagctagccaagtcgcgctgtta
tgggaggatttggcgcgcaagcaccaaacccacccgggtgccatggctgatatctcaggg
tttgactggtccgttcaggattgggaactctgggctgacgtatctatgaggattgagcta
ggctcgtttccagcgttgatggcgaaggcagctatatcgcggttttactgcttgatgaac
gctaccttccaattaacgaatggagagctcttagcccaggaactgccaggactcatgaag
tccgggtcgtactgtacctccagctccaactcccgcattcgctgccttatggctgagctc
atcggctcgccttggtgtatcgcaatgggagatgattctgttgagggatgggtcgatgat
gctcccaggaaatattcagcactaggccatctctgtaaagagtatgaagcgtgtccagtg
ctccccaacggagatttgaaggaggtgagcttttgctcccatctcatctctaagggtcga
gcggaactggagacgtggcccaagtgtctgtttcgatatctcagtggaccacatgatgtg
gaaagcttggagatggagctaagctcttctcgccgctggggccagatagtcagatacctc
cgccggattggccgggtctccggaaatgatggtgaggaaaggagcagcaacgaaagcccc
gcaacaaccaaaacccaaggctcagcagcagcctgggggccgccgcaggaggcgtggccg
gtcgatggagccagtctctcgacctttgaaccctccagcagcggttggttccaccttgaa
ggctggtag
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