Viruses: 155348
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Entry
155348 CDS
T40000
Symbol
HIV1gp1
Name
(RefSeq) Human immunodeficiency virus 1; Gag-Pol
KO
K22951
HIV Gag or Gag-Pol polyprotein
Virus
11676
Human immunodeficiency virus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Gag_p17
RVT_connect
RVT_1
Gag_p24_C
RNase_H
RVP
RVT_thumb
IN_DBD_C
Integrase_Zn
rve
zf-CCHC
rve_3
Asp_protease_2
Motif
Other DBs
NCBI-GeneID:
155348
NCBI-ProteinID:
NP_057849
RS:
NC_001802
UniProt:
P04585
Structure
PDB
PDBj
LinkDB
All DBs
Position
NC_001802:join(336..1637,1637..4642)
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AA seq
1435 aa
AA seq
DB search
MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQI
LGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALDKIEEEQNKSKKKAQQAAA
DTGHSNQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGAT
PQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTT
STLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRF
YKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKA
RVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHTARNCRAPRKKGCWKCGKEG
HQMKDCTERQANFLREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSPSEAGADR
QGTVSFNFPQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGG
FIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLK
PGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRK
LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIP
SINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDL
EIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWT
VNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEP
VHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQ
KITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEP
IVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDSGLEV
NIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVS
AGIRKVLFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQ
VDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTI
HTDNGSNFTGATVRAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLK
TAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRNP
LWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagagcgtcagtattaagcgggggagaattagatcgatgggaaaaaattcgg
ttaaggccagggggaaagaaaaaatataaattaaaacatatagtatgggcaagcagggag
ctagaacgattcgcagttaatcctggcctgttagaaacatcagaaggctgtagacaaata
ctgggacagctacaaccatcccttcagacaggatcagaagaacttagatcattatataat
acagtagcaaccctctattgtgtgcatcaaaggatagagataaaagacaccaaggaagct
ttagacaagatagaggaagagcaaaacaaaagtaagaaaaaagcacagcaagcagcagct
gacacaggacacagcaatcaggtcagccaaaattaccctatagtgcagaacatccagggg
caaatggtacatcaggccatatcacctagaactttaaatgcatgggtaaaagtagtagaa
gagaaggctttcagcccagaagtgatacccatgttttcagcattatcagaaggagccacc
ccacaagatttaaacaccatgctaaacacagtggggggacatcaagcagccatgcaaatg
ttaaaagagaccatcaatgaggaagctgcagaatgggatagagtgcatccagtgcatgca
gggcctattgcaccaggccagatgagagaaccaaggggaagtgacatagcaggaactact
agtacccttcaggaacaaataggatggatgacaaataatccacctatcccagtaggagaa
atttataaaagatggataatcctgggattaaataaaatagtaagaatgtatagccctacc
agcattctggacataagacaaggaccaaaggaaccctttagagactatgtagaccggttc
tataaaactctaagagccgagcaagcttcacaggaggtaaaaaattggatgacagaaacc
ttgttggtccaaaatgcgaacccagattgtaagactattttaaaagcattgggaccagcg
gctacactagaagaaatgatgacagcatgtcagggagtaggaggacccggccataaggca
agagttttggctgaagcaatgagccaagtaacaaattcagctaccataatgatgcagaga
ggcaattttaggaaccaaagaaagattgttaagtgtttcaattgtggcaaagaagggcac
acagccagaaattgcagggcccctaggaaaaagggctgttggaaatgtggaaaggaagga
caccaaatgaaagattgtactgagagacaggctaattttttaagggaagatctggccttc
ctacaagggaaggccagggaattttcttcagagcagaccagagccaacagccccaccaga
agagagcttcaggtctggggtagagacaacaactccccctcagaagcaggagccgataga
caaggaactgtatcctttaacttccctcaggtcactctttggcaacgacccctcgtcaca
ataaagataggggggcaactaaaggaagctctattagatacaggagcagatgatacagta
ttagaagaaatgagtttgccaggaagatggaaaccaaaaatgatagggggaattggaggt
tttatcaaagtaagacagtatgatcagatactcatagaaatctgtggacataaagctata
ggtacagtattagtaggacctacacctgtcaacataattggaagaaatctgttgactcag
attggttgcactttaaattttcccattagccctattgagactgtaccagtaaaattaaag
ccaggaatggatggcccaaaagttaaacaatggccattgacagaagaaaaaataaaagca
ttagtagaaatttgtacagagatggaaaaggaagggaaaatttcaaaaattgggcctgaa
aatccatacaatactccagtatttgccataaagaaaaaagacagtactaaatggagaaaa
ttagtagatttcagagaacttaataagagaactcaagacttctgggaagttcaattagga
ataccacatcccgcagggttaaaaaagaaaaaatcagtaacagtactggatgtgggtgat
gcatatttttcagttcccttagatgaagacttcaggaagtatactgcatttaccatacct
agtataaacaatgagacaccagggattagatatcagtacaatgtgcttccacagggatgg
aaaggatcaccagcaatattccaaagtagcatgacaaaaatcttagagccttttagaaaa
caaaatccagacatagttatctatcaatacatggatgatttgtatgtaggatctgactta
gaaatagggcagcatagaacaaaaatagaggagctgagacaacatctgttgaggtgggga
cttaccacaccagacaaaaaacatcagaaagaacctccattcctttggatgggttatgaa
ctccatcctgataaatggacagtacagcctatagtgctgccagaaaaagacagctggact
gtcaatgacatacagaagttagtggggaaattgaattgggcaagtcagatttacccaggg
attaaagtaaggcaattatgtaaactccttagaggaaccaaagcactaacagaagtaata
ccactaacagaagaagcagagctagaactggcagaaaacagagagattctaaaagaacca
gtacatggagtgtattatgacccatcaaaagacttaatagcagaaatacagaagcagggg
caaggccaatggacatatcaaatttatcaagagccatttaaaaatctgaaaacaggaaaa
tatgcaagaatgaggggtgcccacactaatgatgtaaaacaattaacagaggcagtgcaa
aaaataaccacagaaagcatagtaatatggggaaagactcctaaatttaaactgcccata
caaaaggaaacatgggaaacatggtggacagagtattggcaagccacctggattcctgag
tgggagtttgttaatacccctcccttagtgaaattatggtaccagttagagaaagaaccc
atagtaggagcagaaaccttctatgtagatggggcagctaacagggagactaaattagga
aaagcaggatatgttactaatagaggaagacaaaaagttgtcaccctaactgacacaaca
aatcagaagactgagttacaagcaatttatctagctttgcaggattcgggattagaagta
aacatagtaacagactcacaatatgcattaggaatcattcaagcacaaccagatcaaagt
gaatcagagttagtcaatcaaataatagagcagttaataaaaaaggaaaaggtctatctg
gcatgggtaccagcacacaaaggaattggaggaaatgaacaagtagataaattagtcagt
gctggaatcaggaaagtactatttttagatggaatagataaggcccaagatgaacatgag
aaatatcacagtaattggagagcaatggctagtgattttaacctgccacctgtagtagca
aaagaaatagtagccagctgtgataaatgtcagctaaaaggagaagccatgcatggacaa
gtagactgtagtccaggaatatggcaactagattgtacacatttagaaggaaaagttatc
ctggtagcagttcatgtagccagtggatatatagaagcagaagttattccagcagaaaca
gggcaggaaacagcatattttcttttaaaattagcaggaagatggccagtaaaaacaata
catactgacaatggcagcaatttcaccggtgctacggttagggccgcctgttggtgggcg
ggaatcaagcaggaatttggaattccctacaatccccaaagtcaaggagtagtagaatct
atgaataaagaattaaagaaaattataggacaggtaagagatcaggctgaacatcttaag
acagcagtacaaatggcagtattcatccacaattttaaaagaaaaggggggattgggggg
tacagtgcaggggaaagaatagtagacataatagcaacagacatacaaactaaagaatta
caaaaacaaattacaaaaattcaaaattttcgggtttattacagggacagcagaaatcca
ctttggaaaggaccagcaaagctcctctggaaaggtgaaggggcagtagtaatacaagat
aatagtgacataaaagtagtgccaagaagaaaagcaaagatcattagggattatggaaaa
cagatggcaggtgatgattgtgtggcaagtagacaggatgaggattag
DBGET
integrated database retrieval system
