KEGG   Viruses: 15614183
Entry
15614183          CDS       T40000                                 
Symbol
L854_sLgp1
Name
(RefSeq) Lone Star virus; RNA-dependent RNA polymerase
  KO
K26694  Phenuiviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-]
Virus
1219465  Lone Star virus
SSDB
Motif
Pfam: Bunya_RdRp L_protein_N L_PA-C-like DUF6831
Other DBs
NCBI-GeneID: 15614183
NCBI-ProteinID: YP_008003507
RS: NC_021242
UniProt: R4NUK2
LinkDB
Position
NC_021242:17..6274
AA seq 2085 aa
METRIRNEVIPFPRRNNITAEGLVYLAHLDDSRLPEFSITPQEDSLLLEIDEIPESISQV
GSSIIVGHQRFEVGKVSTLIHDFTFAAIAEETDKPLSRHFPIINDGEDHLTPDLIIDASA
TEKRVIEFATHRGPGVRGVLNYYNQKIEKYTRPLAARQERTQWDISLSCIAVGYDHVVSD
LTLSQATVDELVYRFRFASAVFNQILVAFPELAPKVSEEISSAERAGRECLNFLTRTFIE
EPEGESLLENFPLGSKRYLDAFLENSEDEQYLKRVFAGTFQETLDEIRGEHILEGHRRGP
ALERNGEEASSQMAQLVKDQLDAYLKQKVKQDESKFKSTIKIPGWLIPDTPRTIDIGINH
KDLEGMSDETVTARVWKAALTEVIFTPQNSWQEDLEREYAIATSRLQVDPEGENTKQDYH
RVKINLPAQDWVSLAARGLEGKSMRQEELVRKTDEASHTVLSPHHDISGISSCIESNNWF
HHFKLGQEENLYGVLDVLISSAMEVATDGQQVGEKILKAFKDYRNLNCVHWASMVTQIAT
ELAIAAKQSCKRHHFIIKKVPNFPIYMLIKTSRSGSHVFYSLAARTNSVKHELSGRVFKE
YERSGNWFITEFNSVKLCKVENMLKLPMLIVALISYSQESDEKVVTKLSRPTTFTRKLVT
TAIMVCMEDKALTEELITIQRYIQMEGFVTEPLLPKPHKMLEKLSVPLRTTLQVFLFQQC
LKAIRSISRTPYRRMCKAGEVSWRGCFSGVIGMSCSPEQMVNSWYLGYLKNKDEDTEVNM
LGAMYEKIVKVEEKRPLDSSNLLGGDPLKPNMHEFSGSFIKFMARALNDEIRGRKGHNWQ
EEITTQFYRSIGSVTLDQLATLKASSSFGPEWENFDDVRLKEYHRVKVLERISELVQEGH
TFYTDTIGQCFRVVLEDGCMRICLFKKAQHGGLREIYVLRLEERLIQFGIELLARKINEA
VGHETISVPSRKEEILDTHQARAAKACGEGTLITVCSSNDARTWNQGHYTTKFAFLMCEL
MPRELHGFIWMSCAIFRKKKMMLNLDYLNSMCRKRPEASGFKQRLYDGFSGNEEVPWIQK
GKTFIQTETGMMQGILHLTSSLFHAAYQAAIRKILKAKLKTTINSRVLIDVIEGSDDSAI
VISAAVKSDDEERKFRLMASVLLHWVKRLGLYAGIYMSPKSTIGCIDVCEYNSEFRFSRL
MCRPTLKWVTACLNIPEVEKIADRQESFSNLLTSVLEGGGTSSLCSVLQLTQAWCHYVLL
GLWSSCVFKLIAPYMEESKNPDIGFFILDCPVSAGILGFRHNLWRYVRKTKLSAIFAKIL
DNKGHEGFTLTSGGSLSKCHLIRWGDRKKLDGIKNRTGMNLDWRILTDEDPSLLYKPPQN
NHEVKVAISLKLDSPGVAESLSKGNVLGRVIASSVYILQRRCITVRSQRRKYTLAELMLE
TEDVGRTLTLAEENALFGDIIALEKNEALCQSYGEAIGNFIGKSREMRRAKVEVLSADEA
FRAPPVKIMGDVFFGTTKSHMGQNMLARELGYLKESFPWISADPHECLSNSPFTCQAELK
TFFEKLEQKTRKVRMIGAAVFTRMGQTSLDNLLRFNFQKNFELTRQGNGEYEVVNEDEKF
CKHVITMILSGPFSNERKSQMIVDFLKISDLSPPKTLLKKSRTNVLRVIRAWLEGHSRIE
ELVERSMDGICGAFTVRQKISRDSSGQLQYRGLGVWTGRIEGTDCRLQIENSGPGEQVLK
QVTISSDKNLSDFLSGLERLCKELRVTNPRKSWAKQKKQDLSLIGALVDFKLESRLSCAG
CPLRLVPASEGFLKEMMDRSNISLIVRGDILNIKADLGDGRLITMISYKASGQDADQEQG
ARFFSRREVLKTHLSWSVREPYLSWISLRPVPDALVPRLEEEIMGKRRTEGIDAKQLKDV
YQRCCKSSLRRKGLTVGQFSTVKLRIEDTSDDVEINLLELLEEEVDFTSTLERTSLDMLE
DSIEDMEVFFGEEDLEIFDFTELISRADPLAYHGFCDRIIEDFVKKLGHDVIRRAIQKRE
MLQTDAELVKKLFDCIGENPEELEIVHDELDEYASSGQITEEVWG
NT seq 6258 nt   +upstreamnt  +downstreamnt
atggaaactaggatacggaatgaggtgatcccgttccccaggaggaacaacatcactgct
gagggcttggtgtatcttgcccaccttgacgactctagactcccagaattcagcatcaca
ccccaggaggactctcttcttctcgagatagatgagatcccagaaagtatcagtcaagtg
ggcagcagcataattgtggggcaccaacggtttgaggtcggaaaggttagcacgctaatt
catgattttacttttgcagccattgctgaagaaactgataagcccttatcaagacatttt
ccaatcataaatgatggtgaggaccatctaacaccagatctcatcattgatgcttccgcc
acggagaagagggtgatagagtttgcaactcacagaggcccaggggtgaggggtgtgtta
aactattacaatcaaaaaattgaaaagtacacaagaccactggcagcaaggcaggaaaga
acacaatgggacatatctttgtcttgtattgcagtagggtacgaccatgtggtgtcagat
ctcacactatcacaagccactgttgatgaactagtgtacagattcagatttgcttctgct
gttttcaatcagatccttgtagctttcccagaactagctccaaaagtctctgaggaaata
tcttcggctgagagagctggaagagaatgcctgaacttcttgacaagaaccttcatagag
gaacctgaaggcgagagcctcctagagaactttcctctagggtccaaaagatatttggat
gctttccttgagaattccgaagatgagcagtatctcaagagggttttcgcagggactttc
caagaaaccctagacgagataaggggagaacacattctagaaggacacaggaggggccca
gccttggagagaaatggtgaggaagcatcatcacaaatggcacaactagttaaggatcaa
cttgatgcttacctaaaacagaaagtgaagcaggatgagagtaaattcaaatcaactatc
aagattcctggctggctgattccagacacaccgagaaccattgatataggcataaaccac
aaggatctagaaggcatgtctgatgaaactgtcacagctagagtttggaaggcagctcta
actgaggtcatcttcactcctcagaacagctggcaagaggaccttgagagagaatatgca
atagctaccagtaggctgcaggttgacccagagggggaaaacaccaaacaagactaccat
agagtgaaaataaatctccctgctcaagactgggtgtctcttgctgccagaggcttagaa
gggaagtccatgagacaagaagagctcgtcagaaaaactgatgaggcatcccatactgtc
ctgagcccacaccatgacatctctggcattagttcctgcattgagtcaaacaactggttc
caccacttcaagttaggacaggaagaaaacctctacggggttctggatgtcctgatatca
tcagcaatggaagtagccactgatggtcaacaagtgggtgaaaagattctgaaggctttc
aaggattacagaaacctcaactgtgttcattgggcaagcatggttacccagatcgcaaca
gagctagccattgctgcaaaacaaagctgcaaaagacatcacttcatcataaaaaaagtc
cccaacttccccatatatatgttgatcaaaaccagcaggtcaggatctcatgtattctac
agcttagctgccaggaccaactctgtcaagcacgagctctcaggcagagtcttcaaagag
tacgagcgttcagggaactggtttataactgagttcaattctgttaagttgtgcaaggtg
gagaacatgctcaagttgcctatgttgattgttgccctgatttcatactcacaagagtca
gacgaaaaagtggtcaccaaactgtctagaccaaccacattcacaagaaagctagtgacc
acagccattatggtgtgtatggaggataaggccttaactgaggaattgattaccatacag
agatacatccagatggaggggtttgtgacagaacctctactgcccaagccccacaagatg
ttggagaagctctctgtaccactccgaactacactgcaagttttcctctttcagcagtgt
ctcaaggcgatcagatccatttcaagaaccccttataggaggatgtgcaaggcaggcgag
gtgtcctggagaggttgcttctctggtgtcatcgggatgtcctgctcccctgagcagatg
gtgaactcatggtacttggggtacttaaagaataaagacgaggatacagaagtaaacatg
ctgggtgcaatgtatgagaagattgtgaaagttgaagaaaaaaggcccctggactcctct
aacctgctaggtggggacccattaaaacccaacatgcatgaattctcaggctccttcatc
aaatttatggcgcgtgctctaaatgatgagattcgaggtcgtaaagggcacaactggcag
gaagagattacaacccaattctatcgatctattggttctgtaacccttgaccaattagca
actttgaaagcctcaagctcttttggcccagaatgggaaaactttgatgatgttaggcta
aaggaataccacagggtcaaggtgctagagagaatctctgaactggtccaggaaggccat
accttctacacagacacaataggccaatgttttagagtagttcttgaagatgggtgcatg
agaatttgcttgttcaaaaaagcacaacatggtggactgagggagatatacgtcttgaga
ctggaagagagactcatccaatttgggattgagttactagctcgcaaaataaatgaggct
gttggtcatgagaccatcagtgtgccaagtagaaaagaagaaattctggacactcatcaa
gccagagctgcaaaagcatgtggtgaaggcacactcatcactgtctgtagttctaatgat
gccagaacttggaatcaagggcactacaccacaaaatttgcctttctcatgtgtgagctc
atgcctcgagaactgcacggcttcatctggatgtcttgtgctatcttcagaaagaagaag
atgatgctaaacctggactatctaaatagcatgtgcagaaagcggcctgaggccagtggg
ttcaaacaaagactttacgatggtttctctgggaatgaggaagttccctggatacagaaa
gggaaaaccttcatccaaacagagacagggatgatgcaaggaattttgcatttaacctct
agcttgtttcatgcagcctatcaagcggctatcaggaaaattttaaaggcaaaactgaaa
acaacaatcaacagcagagtcttgatagatgtgattgaaggctctgatgatagtgcaatt
gtgatatctgcagctgtcaagagtgatgacgaagaaagaaaatttaggctgatggcttca
gttttgctgcactgggttaaaaggcttggcctttatgccggaatttacatgtcccccaaa
agcacaattggttgcattgatgtgtgcgagtacaactctgagtttagattttccagactc
atgtgtaggcccaccctcaagtgggtcacagcatgtctaaacattccagaagttgagaaa
atagcagacaggcaagagtcattctctaatttgttgacctctgttctagaaggaggtgga
acatcaagtttatgttcagttctacaactaacacaggcatggtgtcactatgtccttctg
ggcctatggtcatcctgtgtgtttaagctgatagcgccttacatggaagagtcaaagaat
cctgacataggctttttcattctggattgcccagtctcagcagggattttaggttttaga
cacaacctctggaggtatgttagaaaaaccaagttatcagcaatctttgccaaaatacta
gacaataagggtcatgaaggcttcactctcacctcaggagggtctctctccaaatgccat
ttgatcagatggggagacagaaagaaactagacggtattaagaaccgaacaggtatgaac
ttagactggcggatattaacagatgaggacccctctcttctgtacaaaccacctcagaac
aatcatgaggtgaaggtggccatcagtcttaaactagatagtccaggagttgcagagagt
ttgtctaaaggcaatgttcttggcagagttatagcatcatcagtttacattttacagaga
cgttgcatcacagtaaggagccagaggaggaagtacacccttgcagaactgatgctagag
acagaagatgttgggaggactttaactctagctgaagagaatgccttgtttggtgatatt
atcgcattggagaagaatgaggccctgtgtcaatcctatggagaggcaattgggaacttt
ataggcaagtccagagagatgaggagggccaaggttgaagtcctatccgctgacgaagca
tttagagcacctcctgtaaagatcatgggggatgtcttctttggaacaactaaaagccac
atggggcaaaacatgttggccagggaacttggttatcttaaagaaagcttcccatggata
tctgcagaccctcatgagtgcttaagtaactctccattcacctgtcaggccgagttgaaa
actttctttgagaaactagaacagaagactaggaaggttaggatgataggtgctgctgtt
ttcacaaggatgggtcaaaccagcttggataacctattgagattcaacttccaaaaaaac
tttgaactaactcgacaggggaatggcgagtacgaagtggtaaacgaagacgaaaagttt
tgcaaacatgtcataactatgatcctatcaggccccttctcaaacgagagaaagtcacag
atgattgtggatttcctcaagataagtgacctctcccctcccaagacccttcttaaaaaa
agcagaaccaatgtcttgagggtcatcagagcttggctagaaggccattccagaattgaa
gagctcgttgagagaagcatggatggcatatgtggagcctttactgtcagacagaaaatc
agcagggatagcagtggtcaactccagtataggggactgggggtctggactggaagaata
gagggtacagactgtagactacaaatagagaactccggtccaggggaacaagttttaaag
caagttaccatctcctcagacaaaaatttatctgatttcctgtctggtctggaacgcctc
tgcaaagaattaagagttaccaacccaaggaaatcctgggcaaagcagaagaagcaggat
ttgagcctgataggagctcttgttgactttaaacttgaatcacgactctcttgtgcgggc
tgtcctctgaggcttgtacctgcatctgagggttttctgaaagagatgatggataggtcc
aacatttctctaattgtaagaggtgacattctcaacatcaaagcagacttaggagatggc
agacttatcaccatgataagttacaaggcatctggtcaggatgcagaccaagagcaagga
gctagatttttctcccgaagagaagtgcttaagacacacctatcatggtcagttagggag
ccataccttagctggatcagtttgcggccagtcccggatgccttagttcccagattagaa
gaggagatcatgggaaagagaagaactgaaggcattgatgcaaaacaactcaaggacgtc
taccaaaggtgctgcaaaagttccttaagacgaaagggcctcactgttggtcagttctca
accgtgaaactcaggattgaagacactagtgatgatgtggagatcaatcttctggagcta
ttagaagaagaagttgattttacatccaccttagagaggacttctcttgatatgctagag
gactcaatcgaggatatggaggtattcttcggtgaggaagacttagaaatttttgatttc
acagagctcatatctcgtgcagatccactagcctaccatggcttttgtgaccgcattata
gaagacttcgtgaagaaattaggacatgatgtcatacggagagccatccaaaagagagag
atgcttcagacagatgccgagcttgtgaagaagctttttgattgcataggcgagaaccct
gaagaactagagattgtccacgatgagctggatgagtatgcatcctctggccaaataaca
gaggaggtctggggttag

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