Viruses: 15957175
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Entry
15957175 CDS
T40000
Symbol
VP1, M700_s1gp1
Name
(RefSeq) Human rotavirus B; RNA dependent RNA polymerase
KO
K25309
Rotavirus RNA-directed RNA polymerase [EC:
2.7.7.48
]
Virus
10942
Human rotavirus B
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_4
RdRP_1
Motif
Other DBs
NCBI-GeneID:
15957175
NCBI-ProteinID:
YP_008126843
RS:
NC_021541
UniProt:
B6RUN5
LinkDB
All DBs
Position
NC_021541:9..3491
Genome browser
AA seq
1160 aa
AA seq
DB search
MDSFQFFSWLLKDIERNLLYTSLVYTSPRIAIVRYEESEKSRLWKSKETNVLSPEEILSK
IKDKLDSLSCIHDKIEELLRIRYFTVYVEDKSDKRNIILTWLSRTITDLGKHVEYDSIKL
IELQARQWRIDNANFLRPYHYNIPINEYLRDNEIELLDTGDNKWKSDTLQGLLPNFYHRT
HTLVGSILYAINSRLDKYSTDQKRALSYLLHVIQKCFSEGYLEMSRDRKWNHTLDELRNS
RFHLYNAKIIHAACAMISLAHSDHIDLEFLCQIITVYSIIPANAAKLLSSPMTMYVGVVT
FSSHQVASTGNASECSPTTIQNNVYVDKAQYDEWSNMFNSDPLNASKLLRLMNSNLKTSI
EQFSLIFNCFSATFHVGHRIDNAQDAITDQVTATYTSDIDREMYDNYYYRLKNMLKEEII
QYVEDHIAKQYVDVTAESLSALANSSNGFSKEVTFIDRKIKTTKKILHLDNDLLAEDYND
LGKALSHGIPMGTRNVPARQTRGIFILPWQVAAIQHTIAESLYKRAKKGSYQGSFAEAYT
AKTASLTYGVLAEDTSKATKIILYTDVSQWDASQHNTEPYRSAWINAIREARSEMKWLYS
DEPIVLNMNVLDSMIKIQEYLLNSNLIVASPGSQRPLKIIRYHGVASGEKTTKIGNSFAN
VALIETVLDSVKQEIPDIEVTHLRVDGDDNVVSLTTSCQISKLQETVKRAYSKLNARVKA
LASYTGLEMAKRFIVCGKIFERGAIPIFTAERPYGTDVSIQSMCGSSIYSSAVNAYRGFG
DSYFAFMQDVLVPPSSSVRITGRLRVLLSPVTLYATGPLSFEITPQGLGGRCRMYTQSEK
LFTLFKLLTQTVSVSVTPEEIKKYSNTPQFKKRTSVMIKSMQMKLHTEAAALSRIMIDKE
EQKTLGVPNVQSQKNRSQILKAINILGVPEQSGISPKGYYPEELYSLVVKHSTIKFIDYQ
QPIDIYRVNNKAVELLRAQLGVRISDSKPIAKPSNHLYDIVSSISPIKLSPSDLLKQSRK
YDLSTYKGKRTYLLDLGLTGNTLKTYLASKLLFRDLLLSKYDELYSTPGFGATQLTTIPL
NVSSAEKVFSIRLNLPSHLYEIVMLLLLYEYVHYVFMSHKTFTATMHASSQEESARLTKL
VLHMLDDIQLDQVSFSDDAW
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggactcctttcaatttttcagttggttactgaaggatattgaaaggaatctactgtac
accagtttggtatatacaagtccaagaattgcaatagttcgatatgaagaaagtgaaaaa
tcaagattatggaaatcgaaagaaactaacgttttatctccagaggaaattctgagcaag
atcaaagataagctagattctttatcatgtattcatgacaaaattgaagaactgttacgc
atacggtatttcactgtatacgtcgaggacaaatctgataagaggaacataattttaacc
tggttgagcagaactataacagacttggggaaacatgttgagtatgattctatcaagttg
attgagctacaggcaagacagtggaggatagataatgctaacttcctacgaccttatcat
tataatattccaattaatgaatatcttcgagataacgaaattgagttgttagacactggt
gataataaatggaaatcagacactctacagggattactccctaatttctatcatcgtacg
catactctagtgggatctattctttatgcaattaattccagactggacaaatattctact
gatcaaaagcgtgctttatcttacttgttgcacgttattcaaaaatgcttttctgaaggt
tatctcgagatgtctagagatagaaaatggaatcatacattggatgagttgagaaactca
agatttcatttatacaacgcaaaaataatacacgccgcttgtgctatgatttcgttagct
cattctgatcacattgatttggagttcctatgtcaaatcattaccgtgtatagcataatt
ccagctaacgcagcaaaattactttcgtcaccaatgacaatgtatgtgggagtcgtgact
tttagctcgcatcaagtggcatcaactggtaacgcctccgaatgctctcctactactatt
caaaacaacgtttacgttgacaaagctcaatatgatgaatggagcaacatgtttaactct
gaccctcttaatgcctctaaattattacgtctgatgaatagcaatctaaagacttcaatt
gaacaattttcactaatttttaattgtttttcagctactttccatgtaggccaccgtata
gataatgctcaagatgccataacagatcaggttacagctacatacacatcagacattgat
cgagaaatgtatgataattactactataggttgaagaatatgcttaaagaagaaataata
caatacgttgaagatcatattgctaaacagtatgttgacgttacagccgaatccctttca
gctttggccaattcatcaaatggattctctaaagaagtgacttttattgatagaaagatt
aagactactaaaaaaattctgcacttagataatgatttgctagctgaagattacaatgat
ttaggaaaagcattatctcatggaataccaatgggtacgagaaacgttcccgctaggcaa
acaagaggaatattcattctcccatggcaggtggcggctatacaacacactatagctgag
tcgttgtacaaacgagcaaagaagggttcgtatcaagggtcattcgctgaagcttataca
gcaaagacggcctctctcacatatggagtattagctgaggatacctctaaagctaccaaa
atcatattatacactgatgtatctcagtgggacgccagtcaacataataccgaaccatac
cgatccgcttggattaacgccatacgtgaagcgagatctgaaatgaaatggctgtattct
gatgagcctattgtattaaatatgaacgttcttgattcaatgataaaaatccaagagtat
cttttaaattccaatttaatcgtggcttctccaggctcacaacgtccactaaaaataata
agatatcatggtgttgcatcgggtgaaaaaacaaccaaaataggcaactcgttcgcaaat
gtagcactaatagaaacagttttagacagtgtgaaacaagaaattccagatatagaagtt
acacatctaagagtagatggagacgataatgtagtgtcattaactacgtcatgtcaaata
tcaaagttgcaagaaacggttaagagagcatattcaaaactgaatgctagagttaaagca
cttgcttcatatacaggtctagagatggcaaaaagattcatagtatgtggaaaaatattc
gaaagaggggcaattcccatttttacggctgaaagaccttacggaaccgatgtgtcaata
caatccatgtgcggatcatccatttattcgtctgccgttaatgcgtaccgtgggtttggc
gattcatattttgcgttcatgcaagatgtattggttcctccgtcatcatccgtaaggata
actggaagattaagggtgttgttgtcaccagtaactttgtatgcaactggtccgctcagc
tttgaaataactcctcagggattaggaggcagatgtcgtatgtacacacaatcagaaaaa
cttttcacattatttaagctgttaactcaaactgtatctgtttcagttactccagaagaa
attaagaagtattctaacacgcctcaatttaaaaaacgtacaagcgtcatgatcaaaagt
atgcaaatgaagttacacactgaagctgcagcattgtcaagaataatgattgataaagaa
gaacaaaaaacattaggagtgccaaatgttcagagtcaaaagaatagaagtcagatatta
aaggcaattaacattctcggtgttccagaacagagtggtatatccccgaaagggtattac
ccagaagaactctattctctcgttgtcaaacattcaaccatcaaatttattgattatcaa
cagccaatcgacatatatcgtgtaaataacaaagctgtagagttattacgtgcccaattg
ggggtaaggatatctgactcaaaaccaatcgccaaaccatccaatcatttgtatgatata
gttagttctatttctccaatcaaactgtcacctagcgatttgttaaaacaatccagaaaa
tatgatttgtccacgtacaaaggtaagagaacatatctgcttgatctaggtctcacagga
aatacactgaagacttatctcgcttcaaaattactttttagagatcttttactatccaaa
tatgacgagctatattcgacgccaggatttggtgccacacaactaacgacaatcccgtta
aatgtctcttcggctgaaaaagtcttttccataagattgaatttaccttctcatttgtat
gagattgtcatgttgttattgttatatgaatatgtacactatgtattcatgtcccacaaa
acttttaccgctacaatgcatgcttcaagtcaagaagaatctgcgcgattaactaaactc
gtgctacatatgttagatgatatacaactggatcaagtgtcattttcagatgacgcttgg
tag
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