Viruses: 16028490
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Entry
16028490 CDS
T40000
Symbol
M908_s2gp1
Name
(RefSeq) Rotavirus F chicken/03V0568/DEU/2003; VP2
KO
K24598
Rotavirus core capsid protein VP2
Virus
994994
Rotavirus F chicken/03V0568/DEU/2003
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Rota_VP2
Motif
Other DBs
NCBI-GeneID:
16028490
NCBI-ProteinID:
YP_008145314
RS:
NC_021626
UniProt:
M4H1X6
LinkDB
All DBs
Position
NC_021626:17..2731
Genome browser
AA seq
904 aa
AA seq
DB search
MSSNKAKQRLEELKNKREASLKKAINEGAEAVKKLVDQQNDENSVQSEQTLSQSDTKTKE
DKKEKENSQIQQSDEVKSLEDVEKAAKEKRDGTRHLIEVLKTKEDSEKEIQKEILQKAIP
TYTPNDEAVKKLSEIKIEENAEIKQLFRLFEPEVVPIYANDGRKTLITAWYWKLKKDDIP
TGDYTVREYFLSLYTHVIDTMPPYIMLRSMAVDNKHSREAGKVVDAETASILEKLFADEQ
TDAMTRRYIAEMRHRVNAEANIVRYQAVLHPVDYEFNQYFLEHQILRPLTTREIFQMIPT
RMRNDVNYIFTIDNSFLETARYVPYNLLQDRLNLHEGLQSIWETLTLTNYVHARTAVPDL
VDLVDTETQIKEMSQMLQLEAMTIQSESQFITGINSDAANEFFKTVIAACLSQRTLRMEF
TQANYMSLLSGMFVLALVPNELILRESLNSLQVAIINTILCPAFDIPAMQYNYLEIQTPF
ELILPRIVSRQVRDYLHHVNNNHFLYNVVDGVRNASLQNIIRSGAIVQNVAAALLNIAGQ
PFRAYNQEYKRSIQRAITILTRRAPQIEDSFRMLIYNYEVIQRFIVMNQQYAQTINTELV
NMTAATSYFMLMSNRAVYPDASVLLQYYKVNIRFLHNYNEAIDDTVATLLVSHRLNLYQK
KILSLVTEFMRKLKIFDAPKIPPDQMYLLRNRMRQLPVEQRRADVYNIMETHRTQIERAS
KRIAQGVVLMQQEAPLQHDPIVGYTNVTRNLDGYRTISLEDLQMRGDFQPLTDVLLANQP
IALQGAITYKTETDPFAVLAKSDVAVFAPIIKERNLNALNPISYEINSDSKGFYIVHNNS
WVPTSNTKLFKQPPRKFVLSDSTFFLESGLFYTIFTDPLSFISHTSVEPVNAVAFDGHRI
VRTL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaataaggcaaaacaacgtttagaggaattaaagaataaaagagaagcgtct
cttaaaaaagcaataaatgaaggtgctgaagcagtgaaaaagttagtagatcaacagaat
gacgagaattcagtccaatctgaacaaacattaagtcagtcagacactaaaacaaaagaa
gataaaaaagagaaagagaatagtcagatacagcaatcagacgaagtaaaatcattagaa
gatgtggaaaaagcagcgaaagagaaaagagatgggactagacatcttatagaagtcctt
aaaactaaagaagatagtgaaaaagaaatacagaaagaaatattacagaaggcaatacca
acttatacaccaaatgatgaggcagttaaaaaattgtctgagattaaaattgaagagaat
gcggaaattaaacaattatttagactatttgagccagaagttgttccaatttatgcaaac
gatggtagaaagactttaattactgcatggtattggaagcttaaaaaagatgatatacca
actggagattacacagttagagaatactttctatctctatatactcacgtcattgataca
atgccaccatatataatgctgagaagtatggctgtagacaataagcattcacgtgaagca
ggtaaagtagtagatgcggaaactgcctcaattcttgaaaaattatttgcagatgaacaa
acagatgcaatgacaagaagatatattgcagaaatgagacatagagttaacgctgaagct
aatatagttagatatcaagcagtgctgcatccagttgactatgaatttaatcaatatttc
ttggagcatcagatattaagaccactaacaacacgtgagatatttcagatgataccaaca
cgtatgagaaatgatgttaattatatatttactatcgataattcctttcttgaaacagca
agatatgttccttataatctgttgcaagatagattaaatctacatgaaggtctacagtct
atatgggaaacattaacgttaactaattatgtgcatgccagaactgcagtgcctgatcta
gtagatcttgtagacacagaaacacaaattaaagaaatgtcgcaaatgttgcaattagaa
gcgatgacaatacagtccgaatcacaatttataacaggtattaattctgacgccgcaaat
gaattctttaaaactgttatagctgcttgtttgtcacagcgcactttaagaatggaattt
actcaagcgaattatatgtcattattgtctggaatgtttgtattagctctcgttccgaat
gaacttattcttcgtgaatcactgaattctctgcaagtagcgataataaatacaatttta
tgtccagcttttgacattccagctatgcagtataattatttagaaatacagactccattt
gagctcattttaccacgcatagtttcacgacaagtcagagattatttacaccatgtcaac
aataaccacttcctatataatgtagtagatggagtaagaaatgcctctttacaaaatatt
attagatcaggagcgatagtacaaaatgtagccgctgctttgttaaatatagcaggccaa
ccatttcgcgcgtataatcaggagtataaaagatcaatacaaagagcaattactatatta
acgagacgtgcgccacagattgaagattcatttaggatgttgatttacaattatgaagtg
attcaaagattcatagtaatgaatcagcaatatgcacaaactataaacaccgaattagtg
aatatgacagcagctacgtcgtatttcatgttaatgtcaaatagagctgtatatccagat
gcatctgttctactacagtattataaagtgaacatcagatttttgcataattataacgag
gcaattgatgataccgtagctaccctactcgtatctcataggttaaatctctatcagaag
aaaatactgtcactggtaactgaatttatgcgtaaattaaaaatatttgatgctccaaag
attccaccagatcagatgtatttactaaggaataggatgaggcaattaccagttgaacag
agaagggctgatgtatacaatataatggagacacatagaacacagattgaacgcgcttca
aaacgaattgcacagggagttgtattaatgcaacaagaagcaccattacaacatgaccca
attgtcggttatactaatgtaacaagaaatttagatggttatagaaccatctcacttgaa
gatttgcagatgcgtggagattttcaaccattaacggacgttttgttagctaaccaacca
attgctttacaaggtgcaataacgtacaaaactgaaactgatccatttgctgtattagct
aaatctgacgttgcagtatttgcgccaataataaaagagcggaatctaaatgctttaaat
ccaatttcatatgaaataaattcagactcaaaaggcttctatatagttcataataattca
tgggttccgacatcaaatactaaattattcaaacaaccgccacgcaaatttgttctatct
gattcaacattctttttagagtctggactgttttacactatatttaccgatccattgtca
tttatatcacacacttcagttgaaccggttaatgctgtagcttttgatggtcatagaatc
gtcagaacgctctaa
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