Viruses: 16512858
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Entry
16512858 CDS
T40000
Symbol
pdul_cds_295
Name
(RefSeq) Pandoravirus dulcis; RNA polymerase rbp1
Virus
1349409
Pandoravirus dulcis
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Intein_splicing
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
16512858
NCBI-ProteinID:
YP_008318947
RS:
NC_021858
UniProt:
S4VPP4
LinkDB
All DBs
Position
NC_021858:505937..512674
Genome browser
AA seq
2245 aa
AA seq
DB search
MTSPVIYTCQEDDAARVRGVQLTLVDPEIVRRQSVVRITEPAIYDKNTPKRDGVYDHRMG
VVVRRLACGTCGHMVDSCPGHFGSIELHHPVYHAHYINYVLKVLRCVCYYCSRFLMAPPW
PQAPASGEPGGGCERDAAHATATGGGRAALGKARLAAACEAVKRGRARKACWHCGGPQPE
YSIAKGSPLVIRANWAGVAFETDADRAAALGEPFSAREAHNILLLVPADDYVRMGWDTAN
SHPSWMIITVLPVPPPIVRPSITETEGSRSRGQDDLTHKLKAIVQANNAIAAHRRASASL
PSSSSSSPSAAPSSLSSSSSLASAVCPVVSSTQAAAASGSGAAHNKILATPLADLVMALQ
VEVATYHNNDIRGQKQSTQRSGKPTKGLVERFKGKEGRIRGNCMGKRVNFTARAVISPDP
EIDIDEVGVPYEIVKTLTFPERVTPLTMGDLTRRVRAGPDALAGAKTVTDHNLRTLYLES
RAAGAAHTGLAHDGAGVERTVRGGGSGSGAIVSTMATGVHAASDGVGVAGAWRVPAGGVV
AGADRAPPLQIGWSVERHLRAGDAVVMNRQPSLHMGSMLMHKVVPMPGRTMRFNLAVTGT
YNADFDGDEMNLHVPQSETARAEVTHTMSVSLKTVSPQANKPIIGLVMDALVGCGFLTTN
DTFMDRGVLMQLVTAMKYDAVGRGSRFRLPPPAIVKAVDRRSGRTLPGPLWTGKQLFSLL
LPADVNVERRVRDVDSDADAMLQPVRAWPSGDIVDHEPNPYMGRSARDERVIVVQAGELL
AGSVCKQTVGATTGGLVHVIFKDVNTEGVKRFLSDAQRVANRWLSWHGFSVGIQDCMSDP
ATRARVDRVVDRAVDHIEHVCRFAAHADEPPSAAVDGANQSRRRRRRREWTETDALDSAD
GDGEGDDKGDDDNDDDDGVEGGEEGDGEEETCRGTTAPPPRKRPHIAEAELETCVSRVAN
KVLDQAGRIVQAATDVRTNAVRAMATMGSKGSVFNITQMCGCVGQQSNEGQRIHSESGSR
TLGCYRHAEAVPPPESRGFVRNSYERGLNSREMFLHMIGGREGLVDTAVKTAETGYIQRR
CIKSMESLQIKRGGLVRNANGDIVQFAYGGDGADATYIERVRCREVRMAHDAIRDACRWS
RRAREKSPWPAAEIAAAEAREAARIIAIRDEVLAMQSSLATMGASGGAGDDQLFVTVHAA
RLVETVCRREGGRACARGRISPTELDREVDVLCRSILTMAAEADVGASIAAAAEAAGLPP
LRGTAGLRLVLACELRSRTLVARWAATWSMWEAIRAEIAGDDRRAGRYLRSLVSPGEMVG
AIAGQSIGEPGTQMSVVYEERLLLARPDGGVAVSEIGALVEEAIASADPRLVERDAAHDT
TYVDVTARGLTVPAVDEAGAVRWRRLLGVTRHPPNGALVRVETRSGRSVTATLAKSFLTL
REGRVVPIDGKDLVVGDVLPVNRRLPLWHTRADNDGGGDGDETALAVPTAPARPSLFAAL
RRGCRKRARRCLDRVFAGRGCGEGIASPTDPVETDLLMALASLAGGSHAAMVCDARVILG
RAPAAHVARQSRGDDDDDGDDDGNANEDGAGDIFWDEIVALDVAADHGRDYVYDLTVEHD
ANFSLLSGLQMRDTLRTFHFAGWGAKNVTLGVPRLREIIDATVNMKHPCVTLHLDRRAPA
GCTHEAALAVCRQIEHSTLATLVESHTIDTVNAVDGLAADGGGDRNDDHNHGGDDDDRAF
ARACAALFTQPRASPDAPAAARQPTAGDSAATTTPKTKSRARGAGGTATPSSRTAAAPSA
HETEAVAAWRPQPYLLRYVLDRSATLARGLVPADVARRVAEAVGDAGRVAHAEAAMEGWF
VEVLLDDASGLLARFRQQLPPRPTAGAVPTPDAVSTGDAAAMPPPRPRARAAKADGGASA
RSAAATAAYKATPEEAAEAARWERAALAAIQSAFMASVRVSGVSGVTRAMPTEVARHEGA
AAGEAPEWSVEVDGNALSELLCVPGVDASRSHTNDINRVAAVLGIEAAVAVLFSEIKAVI
SFDGTYVNDRHFALATDTMCCRGSVVAVTRHGFNRADHGFLSRASFEETVDILFDAAAFA
ETDKITDGSVTEPIILGQTAPIGTAISDVLVTDAYARVWRPPSADALGSDDRALVVTAGG
AGPAPNDSSGPAPGASRSGAGGALNHDGPDLDDEDEDDMDLAEPLVDPYTVGQLVPVPRA
DGHVDTADGCPRYAPPSPSLFFFDG
NT seq
6738 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgccggtcatctacacgtgccaagaggacgacgccgcgcgcgtgcgtggcgtc
cagttgaccctcgtcgaccccgagatcgtgcgccgccagtcggtggtgcgcatcaccgag
ccggccatctacgacaagaacacgcccaagcgcgacggcgtctacgaccaccgcatgggc
gtcgtcgtgcgtcggctggcgtgcggcacctgcggccacatggtcgactcgtgtccgggc
cactttggcagcatcgaactccaccacccggtctaccacgcgcactatatcaactacgtg
ctcaaggtgctccggtgcgtgtgctactactgcagccggttcctcatggcgccgccgtgg
ccgcaggcgccggcgtcgggcgagcccggcggcggctgcgagcgcgacgccgcccatgcg
acggccacgggcggcgggcgcgcggccctgggcaaggcgcgcctcgccgccgcgtgcgag
gccgtcaagcgcggccgggcgcgcaaggcctgctggcactgcggcggcccgcagcccgag
tattcgatcgccaagggcagcccgctggtcatccgcgccaactgggccggtgtggccttt
gagaccgacgccgaccgcgcggccgcgctcggtgagccttttagcgcgcgcgaggcccac
aacatcctcctcctggtgccggccgacgactatgtgcgcatgggctgggacacggccaac
tcgcacccgtcgtggatgatcatcaccgtgctcccggtgccgccgcccatcgtgcgcccg
tccatcaccgagaccgagggctcgcggtcgcgcggccaggacgacctcacgcacaaactc
aaggccatcgtgcaggccaacaacgccattgccgcccaccgacgcgcgtcggcgtcgctg
ccgtcatcatcatcatcatcgccgtctgcagcgccatcgtcattgtcgtcatcatcatcc
ctggcatcggccgtgtgccctgtcgtgtcgtcgacgcaggccgctgccgccagcggcagc
ggcgctgcccacaacaagatcctggcgacgccgctggccgacctggtgatggccctccag
gtcgaggtggccacctaccacaacaacgacattcgcggccagaagcagtcgacccagcgc
tcgggcaagcccaccaagggcctcgtggagcggttcaagggcaaggagggtaggatccgc
ggcaattgcatgggcaagcgcgtcaactttaccgcgcgcgccgtcatcagccccgacccc
gagatcgacattgacgaggtgggcgtgccctatgagatcgtcaagacgctcacctttccc
gagcgcgtgacgccccttaccatgggcgacctcacgcgccgcgtgcgcgccggccccgac
gccctcgccggcgccaagaccgtcaccgaccacaacctgcgcacgctctacctcgagtcg
cgtgccgccggcgccgcacacaccggcctggcgcacgacggcgccggcgtggagcgcacc
gtcagaggtggaggcagcggcagcggtgcgatcgtgtcgaccatggccacgggcgtgcac
gcggcgtcggacggcgtcggcgtggcgggcgcgtggcgcgtgccggccggcggcgtcgtg
gcgggcgccgaccgcgcgccgccgctccagatcgggtggtcggtcgagcgccacctgcgc
gcgggcgacgccgtggtgatgaaccggcagccgtcgctgcacatgggctccatgctcatg
cacaaggtggtgcccatgcccgggcgcaccatgcgattcaacctggccgtcacgggcacc
tacaacgccgactttgacggcgacgagatgaacctgcacgtgccccagtccgagacggcg
cgcgccgaggtgacgcacaccatgagcgtgtcgctcaagaccgtgtcgccgcaggccaac
aagcccatcatcggcctggtcatggacgccctcgtcggctgcggcttcctcacgaccaac
gacacctttatggaccgcggcgtgctcatgcagttggtcacggccatgaagtacgacgcc
gtcgggcgcggctcgcgcttccgcctcccgccgccggccatcgtcaaggccgtcgacagg
cgctccggccggaccctgccgggtccgctgtggaccggcaagcagttgttctccctgctg
ctgccggccgacgtcaacgtcgagcggcgcgtgcgggacgtcgactcggacgccgacgcc
atgctgcagccggtgcgcgcctggccgtcgggcgacatcgtcgaccacgagcccaacccc
tacatgggccgctcggcgcgcgacgagcgcgtcatcgtcgtccaggcgggcgagttgctc
gccgggtcggtgtgcaagcagacggtgggcgccacgacgggcggcctcgtgcacgtcatc
ttcaaggacgtgaacaccgagggcgtcaagcgcttcctcagcgacgcccagcgcgtggcc
aaccgctggctctcgtggcacggcttcagcgtcggcatccaggactgcatgtcggacccg
gccacgcgcgcgcgcgtggaccgcgtcgtcgaccgcgccgtcgaccacatcgagcacgtg
tgccgctttgccgcccatgccgacgaaccgccgtcggcggcggttgatggcgcgaaccaa
agtcgtcgtcgccgccgccggcgagaatggacggaaacggatgcgctcgacagcgccgac
ggcgacggtgagggagacgacaaaggggatgacgataatgacgatgatgatggagtggaa
ggaggagaagaaggagacggcgaggaggagacctgccgcgggacgacggcgccgccgccg
cgcaagcggccgcacattgccgaggccgaactggagacgtgcgtgtcgcgcgtggccaac
aaggtgctcgaccaggccggcaggatcgtgcaggcggcgaccgacgtgcgcaccaacgcc
gtgcgcgccatggccaccatgggctccaagggcagcgtcttcaacatcacccagatgtgc
ggctgcgtgggccagcagagcaatgagggccagcgcatccactccgagtcgggctcgcgc
accctgggctgctaccggcacgccgaggccgtgccgccgcccgagagccgcggctttgtg
cgcaactcgtacgagcgcggcctcaactcgcgcgagatgtttctgcacatgatcggcggg
cgcgagggcctcgtcgacacggccgtcaagacggccgagacgggctacatccagcgccgg
tgcatcaagtcgatggagagcctgcagatcaagcgcggcggcctcgtgcgcaacgccaac
ggcgacatcgtccagtttgcctatggcggcgacggcgccgacgccacctacatcgagcgc
gtgcgctgccgcgaggtgcgcatggcgcacgacgccatccgcgacgcgtgccggtggtcg
cggcgcgcgcgcgaaaagtcgccatggccggcggccgagatcgcggcggccgaggcgcgc
gaggccgcgcgcatcattgccatccgcgacgaggtgctcgccatgcagtcgtcgctggcg
acgatgggcgcgtcgggcggcgccggcgacgaccaactctttgtcacggtgcacgcggcg
cggctcgtcgagaccgtgtgtcggcgcgagggcgggcgcgcgtgcgcgcgcggtcgcata
tcgcccaccgagttggaccgtgaggtcgacgtcctgtgtcgctcgatcctgaccatggcg
gccgaggccgacgtgggcgcgtcgatcgcggccgccgccgaggccgccggcctgccgccg
ctgcgcggcaccgccggcctccggctcgtgctggcgtgcgagttgcggtcacgcacgctc
gtcgcccgctgggcggccacctggtcgatgtgggaggccatccgcgccgagatcgccggc
gacgatcggcgcgcgggccgctacctgcgcagcctcgtgtcgccgggcgagatggtgggc
gccatcgccgggcagtccatcggcgagccgggcacgcaaatgtcggtggtctacgaggag
cgcctgctcctggcgcgacccgacggcggcgtcgccgtctcggagattggcgcgctcgtc
gaggaggccatcgcgagcgcggacccgcgcctcgtcgagcgcgatgcggcgcacgacacg
acgtacgtggacgtgaccgcgcgcggcctcacggtgcccgccgtcgatgaggccggcgcc
gtgcgctggcgtcgcctgctgggcgtcacgcggcacccgcccaacggcgcgctcgtgcgc
gtagagacgcgcagcggccgcagcgtgacggccacgctggccaagtcgttcctcacgttg
cgcgagggccgcgtggtgcccatcgacggcaaggacctcgtcgtcggcgacgtgcttccc
gtcaaccggcgcctgcccctgtggcacacacgagcagacaatgacggtggtggcgacgga
gacgagacggcccttgcggtgccgaccgccccggcgaggccgtcgctctttgccgcgctg
cgccgcggctgcaggaagcgcgcacgacgctgcctcgaccgtgtgtttgcgggccgcggt
tgcggcgagggcatcgcctcgccgaccgatcccgtggagaccgatctcctcatggcgctg
gcctcgctggccggcggcagccatgctgccatggtttgcgacgcgcgcgtgatactcgga
cgcgctccggcggcccatgtcgcgcgacaatctcgcggcgatgatgacgacgacggcgac
gacgacggcaatgccaacgaggacggcgcgggtgacatcttttgggacgagatcgtcgcg
ctcgacgtcgcggccgaccacggacgtgactatgtctacgacctcaccgtggagcacgac
gccaacttttccctgctgagcgggctccagatgcgcgacacgctccgcacctttcacttt
gccggctggggcgccaagaacgtgaccctcggcgtgccgcggctgcgcgagatcatcgac
gcgaccgtcaacatgaagcacccgtgcgtgaccctccacctcgatcggcgcgcgcccgcc
ggatgcacgcacgaggccgcgctcgccgtgtgccgccagatcgaacactcaaccctggcc
acgctcgtcgaatcgcacaccatcgacaccgtcaacgcggtcgacggtctcgcggccgac
ggaggtggtgatcgtaatgatgatcataatcatggcggcgatgacgacgaccgcgcgttc
gcacgcgcctgcgccgctctctttacacagccgcgcgcgtcgcccgacgctcccgctgcc
gcgcgtcagccgacggcgggggactcggcagcgacaacgacgcccaagacaaagtcgagg
gcgcgcggcgccggcggcactgcgacgccctcgtccaggaccgcggcggcgccctcggca
cacgagaccgaggccgtcgccgcgtggcgcccacagccctacctgctccgctacgtgctc
gaccgctcggcgaccttggcgcgcggtctcgttccggccgacgtggcgcgtcgcgtggcc
gaagccgtgggcgacgccggccgcgtggcgcacgccgaagcggccatggaaggctggttc
gtcgaggtgctgctcgatgacgcatcgggcctattggcgcgattccggcaacagttgccg
ccgcgtccgaccgcgggcgcggtgccgacgcccgacgcggtgtcgacgggcgacgccgcg
gccatgccgccgccgcggccacgtgcgcgcgccgccaaagccgacggcggcgcgtcggcg
cgatccgccgctgccacagcggcgtacaaggccacgcccgaggaggccgccgaggcggca
cggtgggagcgcgccgcgctggccgccatccagtctgcgttcatggcgtcggtgcgcgtg
tcgggcgtgtccggcgtgacgcgcgccatgccgaccgaggtggcccgacacgagggcgca
gccgcgggcgaggcgcccgagtggagcgtcgaggtcgacggcaacgcgctgtcggaactg
ctgtgtgtgccgggcgtggacgcctcgcgcagtcacaccaacgacatcaaccgcgtggcc
gccgtgctgggcatcgaggccgccgtggccgtgctcttttccgagatcaaggccgtcatc
tcctttgacggcacctacgtcaacgaccgccactttgcgctggccaccgacaccatgtgc
tgccgcggatcggtggtggccgtcacgcgccacggcttcaaccgcgccgaccacggcttc
ctgtcgcgggcctctttcgaagagaccgtcgacatcctctttgacgcggcggcctttgcc
gagaccgacaagatcaccgacggctcggtgaccgagcccatcatcctgggccagacggcg
cccatcggcacggccatctcggacgtgctcgtgaccgacgcctatgcgcgcgtgtggcgt
ccgccgagcgccgacgccctcggcagcgacgatcgcgcgctcgtggtgacggccggcggc
gcgggtcccgcgcccaacgacagcagcggcccggcgcccggcgcatcccgtagcggtgca
ggcggagcgctcaatcacgacggtcccgaccttgacgacgaggacgaggacgatatggat
ctcgccgagccgctggtcgacccctatacggtgggccaactggtgcccgtgccgagggcc
gacgggcacgtcgacacggccgatgggtgtccgcgctacgcgccgcccagcccgagcctc
ttttttttcgacggctag
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