Viruses: 16513185
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Entry
16513185 CDS
T40000
Symbol
pdul_cds_322
Name
(RefSeq) Pandoravirus dulcis; DNA polymerase type-B
Virus
1349409
Pandoravirus dulcis
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
LAGLIDADG_3
Motif
Other DBs
NCBI-GeneID:
16513185
NCBI-ProteinID:
YP_008318996
RS:
NC_021858
UniProt:
S4VPX6
LinkDB
All DBs
Position
NC_021858:join(565353..569634,569773..571127)
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AA seq
1878 aa
AA seq
DB search
MTTPMALTTAIPVGPTAGATMRERPRPPRDTAVEAPTVDLGARAKTMSGLFGVRETVTHV
PAQLRVQLLDPLVRDANGSRDRRQIEDAAQPVAYYHHGEHRESRQFDGFLDDGTLVSAPG
DAMAETDGDDNGDDGWHDEGERRERTPPADTLLLLNGVDGEGRTVCVSVKGMRYAIYVLC
PATWGVEHMQALAATVEGYYGIRRGGVTYQQRALHHMLGWEPETNDLTRTKRHNYCVLGF
GSARVMEWAANAIHGGGNGKLCSRVRLPLTERDMRSLQVYERRVDPVHKALERLGGLQPC
SWFDVRRWRVPELYHTHAQIEVEVDARDIVPRPEIDVMAPVWKASWDVECYSRDGSFPRA
DHPRGCDHTICINTYFSQHRSDGRPPRVVQTSHHFGAVRVHRPVEAERDRVDDPKQRERW
GVREMDLTSAGRPEATATTAGHMVDAEEEPSQREVYVMQCATELEAIEGWRDLIVLDVQP
SVVEGYNTDAFDFGWLGVRAERCARYGVRSRLFEAGVLIGEHTPMRRKDLDSAAKGSNTL
NFIPMPGRILVDMYHIVKAEKRLESYTLDDVCRAIFPKDESLRKIDVPPEEIFEHYASGD
LDRRAIVVEYCARDCRLPLALEEHLMTLTGVVEMARITRTPLPLMLISGQQVKTWSQIVY
EAHTMGYVVNAPENRDADGGTRDWLRGAYGAGDHGGVGDAWLPGVIAMASIRAGGGNADG
HAVPTAGGKVTGVAADAEGYVGATVLQPRAGYYDVPIVTLDYQSLYPSIMEANNLCPSTR
VTSRTVHAQLARHCREVREPVSEVLRADGAGQDDGALNRVFASRRDWLPGQFAVDTDRPG
VPRTVAYREVSPAPSRTHVFVQHVQGVVPRILTALKNQRKKVRADQKAYEKGTALWGVYE
NRQLGIKITANCFPADDHEILTETGFMNYAAVVEHFKHHARLSVACYVDGQLQYHDIAES
NVVANTGDHRLVQFEAGSSTGKRATTNGVSLCCTDNHRIYARVGSTWGNRIWRRKGTESQ
ESAAPPFTIQSAGDILAAGTRDPSTVVQFTAACSKGVALDGDDLPFAATLGLHTEDQIDA
FVELYGYWLGDGWLDVSCQAIAFSPVKTADSAYLAALFARLPLPVLTEDTRGPGAIGAFI
TPKPSEARQRARYSAWAKPHRHYIYTPSWWRYFAEQYGHKYSGAALEHVMQEALRSGSDL
PARRPDAKPLAGKARALATLSPVRDSRPSGACAAQRNYIARRNKLTARYDAMFAANTGKR
RTTPDAEEVRSAKWMWSWVWRRLHPGRLRLLLRGLRIADGDMAGGDRGGGAIYTTSRRFA
EEVVRVAIHAGYTAMIQPRCAAGAVTSLNQKGVPIVATTQNWVVNYSDFTREAQPKITVA
TQMSSAPYHGTVWCVNVPVEPHLIVVRRIVQRHGVSVPSRAVVVGNSVYGFLGAVKRGRM
PCVEVSESVTCIGRDMINATKAYVETHLPRYVGGLLDDPALVAAAAERQRAKERLDAGHA
TADLSAVTLSPPKDDRSDREKNREALLDALAAAGVTPCDITGATVVYGDTDSVMIHFHGV
PKTREGVEVALQLGVAASDYITTKFPDQIILDTEKAYWPYVLFRKKRYVGRMWTLEGKPP
YIDAKGVEVKRRDNWAGMRKTYKACLEAMMERMDINAVKDIVLRLVCDLKGDRVSLDDYK
ISKSLKRDYSKCKSPPPHVVVRDKIARRNPGSEPLAGNRVYFVITIDERLKKKSARAEDP
AYVAANPRLARIDRLYYLQSLANPFGALLEPCFENPQQLFADAAVFIANQQRGQAPITQW
MGGKRAAVAPTCEADIEAAEARERAQIAARVKRRCTDQTYVPAAVLKQQKTEARKAARKA
PPPKTGPLTAFVKKRPAA
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccgatggcgttgacgacggccataccggtgggaccgacggcgggagcgacg
atgcgcgagcggccgaggccaccgcgtgataccgccgtcgaggcgcccacagtggacttg
ggcgcccgcgccaagaccatgtccggcctgttcggcgtgcgcgagaccgtcacccacgtg
ccggcgcagttgcgcgtgcaactgttggacccgctggtgcgcgatgccaacggttcgcgc
gaccgccgccagatcgaggacgccgcccagccggtggcgtactatcaccacggcgagcat
cgcgaatcgcgccagtttgacggctttctcgacgacggcacgctggtctcggcgcccggc
gacgctatggcagagaccgacggtgacgacaacggcgacgacggctggcacgacgaggga
gagcgccgcgaacgcacgccgccggccgacacgctgctgctgctcaacggcgtcgacggc
gagggccgcaccgtgtgcgtgagcgtcaagggcatgcgctacgccatctacgtgctgtgc
cccgcgacgtggggcgtcgagcacatgcaggctctggcggcgaccgtcgagggctactat
ggcatccgccgcggcggcgtcacctaccagcagcgcgccctgcaccacatgctgggctgg
gagcccgagaccaacgacctcacgcgcaccaagcgccacaactattgcgtgctgggcttt
ggctcggcgcgcgtcatggagtgggccgccaacgccatccacggcggcggcaacggcaag
ttgtgctcgcgcgtgcggctgccgctcaccgaaagggacatgcgctcgctccaggtctac
gagcgccgggtggaccccgtgcacaaggccctcgagcggctgggcggcctccagccgtgc
tcgtggtttgacgtgcggcggtggcgcgtgcccgaactctaccacacgcacgcccagatc
gaggtcgaggtcgacgcgcgcgacattgtgccgcggcctgagatcgacgtcatggcgccc
gtgtggaaggcctcgtgggacgtcgagtgctacagccgcgacggctcgttcccgcgcgcg
gaccacccgcgcgggtgcgaccacacgatctgcatcaacacctactttagccagcaccgg
tcggacgggcggccgccgcgcgtcgtccagacctcgcatcactttggcgccgtgcgcgtc
caccggccggtcgaggccgagcgcgaccgcgtcgacgaccccaagcagcgcgagcgctgg
ggggtacgcgagatggatctcacctcggccggtcggccggaagcaacagcgacgacggcg
ggccacatggtggacgctgaagaggagccgtctcagcgcgaggtctatgtgatgcagtgc
gccaccgagttggaggccatcgaggggtggcgcgacctcatcgtgctcgacgtgcagccc
agcgtcgtcgagggctacaacacggacgcctttgatttcggctggctgggcgtgcgcgcc
gagcgctgcgcccggtacggcgtgcgctcgcgcctctttgaggccggcgtgctcatcggc
gagcacacgcccatgcgccgcaaggacctggactcggccgccaagggctccaacacgctc
aactttatcccgatgccggggcgcatcctcgtcgacatgtaccatatcgtcaaggccgag
aagcgtctcgagtcctacacgctcgacgacgtgtgccgcgccatcttccccaaggacgag
tcgctgcgcaagatcgacgtgccgcccgaggagatctttgagcactatgcgtcgggcgac
ctcgaccggcgggccatcgtcgtcgagtattgcgcgcgcgattgccgcctcccgctggcc
ctggaggagcatctcatgaccctgacgggcgtcgtcgagatggccaggatcacgcgcacg
cccctgccgctcatgctcatcagcggccagcaggtcaagacgtggagccagatcgtgtac
gaggcccacaccatgggctacgtggtcaacgcgcccgagaaccgcgacgcggacggcggc
acgcgcgattggctgcgcggggcctatggcgcgggcgaccacggcggcgtgggcgacgcg
tggctgccgggcgtcatcgccatggcgagcatacgcgccggcggcggcaacgccgacggc
cacgcggtgccaacggccggcggcaaggtgacaggcgtggccgccgacgccgagggctac
gtgggcgcgacggtgctgcagccgcgcgccggctactacgacgtgcccatcgtgacgctc
gactaccagtcgctctacccgtcgatcatggaggccaacaacctgtgcccgtcgactcgc
gtgacctcgcggaccgtgcacgcccaactcgcgcgccactgccgcgaggtgcgcgaaccc
gtgagcgaggtgctgcgcgccgacggcgccggccaggacgacggcgcgctcaaccgcgtg
tttgcctcgcgtcgcgactggctgccgggccagtttgccgtcgacaccgaccgccccggc
gtgccgcgcaccgtggcctatcgcgaggtgtcgccggcgccctcgcgcacccacgtcttt
gtgcagcacgtgcagggcgtcgtgccgcgcatcctcacggccctcaagaaccagcgcaaa
aaggtgcgcgccgaccaaaaggcctatgaaaagggcaccgcgctctggggcgtctatgag
aaccgccagttgggcattaaaattacagccaactgcttcccggccgacgaccacgagatc
ctcaccgagaccggctttatgaactatgccgccgtcgtcgagcactttaagcaccacgcg
cgcttgtccgtggcatgctacgtcgacggccaactccagtaccacgacatcgccgagtcc
aacgtcgtcgccaacacgggcgatcaccggctggtgcagttcgaggccggttcgagcacc
ggcaagcgcgccacaaccaacggcgtgtccctgtgctgcacggacaaccaccgcatctac
gcgcgcgtcggatccacatggggcaaccgcatctggcgccgcaagggcacagagtcgcag
gagagcgccgctcccccgttcaccatccaaagcgccggcgacatcctcgcggccggcact
cgcgacccatcgaccgtggtgcaattcaccgcagcgtgtagcaaaggcgtcgcgctcgac
ggagatgacctgccctttgcggcgacgttgggcctgcataccgaggaccaaatcgatgca
tttgtcgaactctacgggtactggctcggcgacggatggctcgacgtctcttgccaggcc
atcgccttttcgccggtcaagacggccgactcggcctacctcgccgccctgtttgcgcgc
ctgccgttgcccgtgctcaccgaggacacgcgcggtcccggtgcgatcggcgccttcatc
accccgaagccgtccgaggcgaggcaacgcgcccgctacagcgcatgggcgaaaccccac
cgccactacatctacacgccgtcgtggtggcgctactttgccgagcagtacggccacaaa
tactcaggcgccgctctagagcatgtgatgcaagaggcgttgcgcagcgggtccgacttg
cccgcgcgccgccccgacgccaagccgctcgctggcaaggcacgagcgctcgcgactctg
tcgcccgtgcgcgacagtcgtccgtctggtgcttgcgccgcacagcgcaactacatcgcc
agaaggaacaaacttacggcgcgctacgatgccatgtttgccgcaaacacgggcaagcgc
cggaccacgcccgacgcagaggaggtcaggagtgccaagtggatgtggtcttgggtgtgg
cggaggctgcatccgggccgacttcgacttcttctccgcgggctccgcatagccgacggc
gatatggcggggggagaccgcggcggcggtgccatctataccacgtcgcgacggttcgcc
gaggaggtggtacgcgtcgccatacacgcgggctacaccgccatgattcagccgcgctgt
gcggcgggcgccgtcaccagcctgaaccagaaaggcgtacccatcgtggcgaccacgcag
aactgggtggtgaactattccgactttacgcgcgaggcccagcccaagatcaccgtcgcc
acccagatgagcagcgcgccctaccatggcaccgtgtggtgcgtcaacgtgccggtcgag
ccacacctcatcgtcgtccgccgcatcgtacagcgccacggcgtctctgttccctctcgt
gccgtggtggtgggcaattctgtgtatggcttcttgggcgccgtcaagcgcggccgcatg
ccctgtgtcgaggtgtcggaatcggtgacgtgcatcggccgcgacatgatcaacgccacc
aaggcctatgtcgagacgcatctgccgcgctacgtgggcggcctcctcgacgacccggcg
ctggtggccgccgccgccgagcgccagcgcgccaaggagcgactcgacgcagggcacgcc
actgccgatctttcagcagtgaccctatctcctcccaaggacgatcgatcggaccgcgaa
aagaacagggaggcgctgctggatgcgctcgccgcagcaggcgtcacaccgtgcgacatc
acgggcgcaacggtagtatatggtgacacggattcggtcatgattcactttcacggcgtg
cccaagacgcgcgagggcgtcgaggtggccctgcaactgggcgtggcggcgtccgactac
atcacgaccaagttccccgaccagatcatcctcgacacggaaaaggcctactggccctat
gtgctctttcgcaagaagcgctacgtgggccgcatgtggacgctcgaaggcaagccgccc
tacatcgacgccaagggcgtcgaggtcaagcgccgcgacaactgggcgggcatgcgcaag
acctacaaggcgtgcctggaggccatgatggagcgcatggacatcaacgccgtcaaggac
attgtcctccgcctggtgtgcgacctcaagggcgaccgcgtgagcctcgacgactacaag
atcagcaagtcgctcaagcgcgactatagcaagtgcaagagcccgccgccgcacgtcgtc
gtgcgcgacaagatcgcccggcgcaaccccggctcggagccgctcgccggcaaccgggtc
tactttgtcatcacgatcgacgagcggctcaagaaaaagtcggcccgcgccgaggatccg
gcctacgtggcggccaacccgcgcctggcccgcatcgaccgcctctactatctgcagagc
ctggccaacccgttcggcgccctcctcgagccgtgctttgagaacccgcagcaactgttt
gccgacgccgccgtctttatcgccaaccagcaaaggggccaggcgccgatcacccagtgg
atgggcggcaagcgcgcggcggtggcgcccacgtgcgaggccgacatcgaagccgccgag
gcgcgcgagcgcgcgcagattgccgcccgcgtcaagcgccgctgcaccgaccagacctac
gtgccggcggccgtgctcaagcagcaaaagaccgaggcgcgcaaggccgcgcgcaaggcc
ccgccgcccaagaccggacccctcacggcctttgtcaaaaagaggcccgcggcgtga
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