Viruses: 1682518
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Entry
1682518 CDS
T40000
Symbol
SaHV2gp26
Name
(RefSeq) Saimiriine gammaherpesvirus 2; major capsid protein
Virus
10381
Saimiriine gammaherpesvirus 2
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_MCP
Motif
Other DBs
NCBI-GeneID:
1682518
NCBI-ProteinID:
NP_040227
RS:
NC_001350
UniProt:
Q00999
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Position
NC_001350:41893..46008
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AA seq
1371 aa
AA seq
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MEVENRPYPYMVSDANLLQQIKESSAEGLFKSFSLLLGKDVRESGVKFEALLGVYTNATQ
FVKFLETSLAVSCVNTEFKDLKRMTDGKIQFKINVPTIAHGDGRRPQKQKQFIIMKATNK
HHIGAEIELSTQDLELLFLSKETPLDVTEYVGAVKTITSALQFGIDALERGLIDTVLTVK
LRHAPPLFILKTLADPTYTERGLKKNVKSDLISMFKTHLVNNSFFLDKSEHLPHSRQYVL
GILTEMIGAVCKETVFKGISTYSTANGQPISGVLETTDKVMRKLVNVIGQADNSIMGPAA
YANYVVRGENLVTAISYGKAMRNFDHFMSKLVDNPTSNLDNDAVDTFESTGSIQKTPIST
SVVMVGNKLIALESLQRMYNETQLPYPLNRRMHYTYYFPVGLHLPSPKYSTSMSVKGTEN
VLHQSVEAWIVNKNNTLQCFNYQNALKSICHPRMNSPILCARALGEAFPDVHNLNIYGIR
SEDAHTMNLYQIVYDYYDNKHVAHVHSLAQKSMMTHEEVLHPTNHEILRTEVHPFFDVYA
ERHQGAAVQYRATHRNLSGNLPPPLAPYSFQECRGYQFEVASGLNHVIDSTTMEIIQETA
FDPAYPLLCYIVESMIHGQEEKFVMNIPLIALCIQTYWNNSGRLAFINSFYMLKFICTHM
GNGHISKDAYSCYRKIYGELIAIEQSLYRLAGHENVANENIGQLINAILDKDLLPPFAYN
DIFTNLLRKSSRHPVVKIGMEEYDDDNDQQNCINIREKMEDLVGNMVNIYQQRNNTDHSR
RYVLDVGELQENTYNSVLEKIFYYVLLPVCTNGHVCGMGVDFENVALTLTYNGPVFASAV
NQDADILDHLENGTLRDVLVASEIRPTVGMIRRLCTSFLTCPFITQAARIKTDRDPGQNI
VTHTDGKYVHQTVLVNGFAAFAIADKSRDAAHCLFYPVPFNKLYCDPMVAATLHPIVAEF
ITEIPSQRNAVVFNLPPRLIAEYEEWHKSPMSSYVSTCSQTPLSLSTMIAMHLKLSPVSF
ICQSRHKIHPGFALTAVRTDEVVAEHIMYSSKASTSVFIGQPTVHRKEVRSDAVVFDINH
ELASLDTALGYSSTIVPAHAAAITTDMGIHCQDLFAMFPSEAYSNQQLNEYIKQKIGSDR
VYGMPLRDPREYMGGNRRVTLPGLSHGQLATCEVIMTPVTADITYFQSSNSPRGRASCVV
SCDAYNNESAEKFLYDHSLPDPCYEFRSTINPWASQIGSLGDVFFNSQHRQMAGPTLYSP
CKQFFNKEAILKNNKLFYTLVTEYVNRLTGAPATSNTDFQYVVINGTDVFLEQPCQFLQE
AYPTLSASHRALLDEYMSHKTTHAPVHVNQYLVEEVAPMKRLLKVGNKTVY
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagaaaatcgaccttatccttatatggtatcagatgctaatttactacaacaa
attaaagaatcttcagctgaagggctgtttaaaagttttagtttacttctaggaaaggat
gtcagagaatctggagtaaagtttgaagcccttcttggtgtctacactaatgctacccaa
tttgtcaagtttctagagacttctcttgctgtaagttgtgttaacactgagttcaaagac
ttgaaaagaatgacagatggaaaaattcaatttaaaataaatgtgcctacaattgctcat
ggagacgggcgccgcccacaaaagcaaaaacaatttattataatgaaagctacaaataag
caccatataggcgctgaaatagaactgtcaacacaagatctagaattactttttttaagt
aaagaaactcctcttgatgttacagaatatgttggagctgtgaagactattacttctgct
ttgcaatttggaattgacgcgttagagagaggactaatagatactgtactaacagtcaaa
ctaagacatgctccacctttgtttattttaaaaactttagcagatcccacctacacagaa
cgtggcttgaaaaaaaatgttaaatctgatcttatatcaatgtttaagactcatctagtt
aacaattcattttttcttgacaaatctgaacaccttcctcactctagacaatatgtttta
ggaattttaacagaaatgattggagctgtgtgtaaagagacagtttttaaaggaatctct
acatacagtactgctaatggccagcctataagtggtgtgttagagacaactgataaagtt
atgagaaagttagtaaatgtcataggccaggctgataactctattatgggtcctgcagca
tatgctaactatgtggttagaggcgaaaaccttgtcacggcgatcagctatggaaaagcc
atgagaaactttgaccactttatgagtaagcttgttgataaccctacatctaatctagat
aatgatgcagtagatacatttgagagtacagggtcaattcaaaaaacaccaatatctaca
tcagtagttatggtaggaaataagctcatcgccctagagagtttacaaagaatgtataat
gaaactcaattgccataccctctaaatagacgcatgcactacacatattactttcctgta
ggcttacatctcccaagcccaaagtattcaacatctatgtctgtaaaaggaacagaaaac
gtgttgcatcagtctgtagaagcttggattgttaacaaaaacaacactctccaatgcttt
aattatcaaaatgctttaaaatctatttgtcaccctagaatgaacagtccaatattgtgt
gctagagctcttggagaagcatttccagacgtgcacaacttaaacatttacggcatcaga
tcagaagatgctcacaccatgaatttatatcaaattgtctacgattattatgataacaag
catgttgcccatgtccactctcttgctcaaaaatcaatgatgactcatgaagaagtcctg
catcccacaaaccatgagatcttaagaacagaagttcatccattctttgatgtgtatgca
gaaagacatcaaggggcagcagtacagtatagggcaactcatagaaatcttagtggaaat
cttcctccacctttagctccatactcattccaagagtgtagaggataccaatttgaagta
gcttctggactcaatcatgtcatagattcaacaactatggaaattatccaagaaactgct
tttgatcctgcttacccactgctttgctacatagttgaatcaatgattcacggtcaagaa
gagaagtttgtgatgaacattcctttaattgctctatgcatacaaacatattggaataat
tcaggaagattagcatttattaacagtttctacatgctaaaatttatttgcacacatatg
ggcaatggtcacatctcaaaagatgcatattcatgttacagaaagatatatggagaactt
attgcaattgaacagagcttatatcgcctagcaggccatgaaaatgttgcaaatgagaac
atagggcagttgataaatgctattctagacaaagatttattgcctccttttgcatacaat
gacatttttacaaatttgttgagaaagtcttctagacatcctgtagtaaagatagggatg
gaagaatatgatgatgacaatgaccagcaaaactgcataaacattagagaaaagatggaa
gatctagttggaaacatggttaacatttatcagcaaagaaacaatactgaccattctaga
agatatgtgttagatgtaggagaactgcaagaaaacacatacaactctgtcttagaaaaa
atattttattatgttttgttgcctgtgtgcacaaatggccacgtttgtggaatgggagtt
gattttgaaaacgttgccttgacactgacatacaatgggccagtttttgcatctgcagta
aatcaagatgcagacattctagatcatctagaaaatggaacactgagagatgttttagtt
gcatctgagatcagaccaactgttggaatgattagaagactatgcacctcctttttaaca
tgtccattcataacacaagcagcaagaattaaaacagacagagaccccggacaaaacatt
gtaactcacactgatggaaaatatgtacaccagactgtgcttgtcaatgggtttgcagcc
tttgctattgcagacaagtctagagatgcagctcattgtctgttctatcctgttccattt
aacaaattgtattgtgatccaatggtagcagctactttacacccaattgtagcagagttt
ataacagaaattccttcacaaagaaatgcagttgtgtttaacttacctccaagattaata
gcagaatacgaagaatggcacaagtctcccatgtcatcttatgtgtcaacgtgctcccag
actccactttcattaagcactatgatagctatgcacttgaaactatcacctgtgagtttc
atctgtcagtcacggcacaaaattcacccagggtttgctctaactgctgtaagaacagat
gaagttgttgctgaacacataatgtatagctctaaagcttccacatctgtgttcattgga
cagccaactgttcatagaaaagaggtcaggtcagatgccgttgtatttgatataaatcat
gaacttgcatctcttgacacagcattaggatacagttcaacaatcgtgccagcccatgca
gcagcaattacaaccgacatgggcatccactgtcaagacttatttgctatgtttccgagt
gaagcatatagtaatcaacaattaaatgaatatataaaacaaaaaattggcagtgataga
gtttatggcatgcctctgagagacccccgagagtacatgggcggcaaccgtagagtaacc
ttaccaggacttagtcatggccaattagcaacttgtgaagttattatgaccccagtcaca
gcagacataacatacttccaatcttcaaacagtcctcgaggtagagcatcatgtgttgtt
tcttgtgatgcttacaacaatgaaagtgctgaaaaatttctatatgatcactcattacca
gacccatgttatgaatttagaagcaccatcaatccatgggcatctcagataggctctctc
ggagatgtgttttttaactctcaacacaggcaaatggcaggaccaactttatacagccca
tgcaaacaattttttaacaaagaagctatactaaaaaacaataaattgttctacactctt
gtaacagaatatgttaacagactaactggagcaccagctacaagcaacactgactttcaa
tatgttgttataaatggcacagatgtgttcttagaacaaccttgccaatttctgcaagaa
gcttatccaacgctgtcagctagccaccgagcgctgcttgatgaatatatgtctcacaaa
actacgcacgctccagtacacgtaaatcaatatttagttgaagaagtagcacctatgaaa
agactattaaaggtagggaacaaaactgtgtattag
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