Viruses: 1724686
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Entry
1724686 CDS
T40000
Symbol
INSVsLgp2
Name
(RefSeq) Impatiens necrotic spot virus; RNA-dependent RNA polymerase
KO
K26280
Tospoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
11612
Impatiens necrotic spot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
Motif
Other DBs
NCBI-GeneID:
1724686
NCBI-ProteinID:
NP_619710
RS:
NC_003625
LinkDB
All DBs
Position
NC_003625:complement(148..8745)
Genome browser
AA seq
2865 aa
AA seq
DB search
MNNYKARLLIENSVTLLSSIDDCIKSNLELSRDLHKKNPDEISEDIIINNNAKNYEALRT
LIARITRDGEGIETGLATVDMKKISEDMTLLEQKYLETELARHDMFGELVSRHLHLKPKK
RHDVEIEHAVREYFEELSKKECSNRLSEEDFKKVSKEYVATNATPDNFVIYKESKSGPLC
MMIYDWKISVDAKTETKTTEKYYKNIWKSLKDVKVKGKSFLEEHPIFISIVILKPIGSMP
IVVTTSRVLEKFEDSESALHANRLRHASQSKLVGVSNIGRIIGTTPTVVREFYADTQKLK
IEFRSILGEEFGSKDIFFSHWTNKYKDRDPTQIAHSEDLEKIIESMVTDDISREEIVHFM
FGNFCLHIETMNDQHIADRFNGYRSSCVNLNVEPKKDISELKDHLLSTKGLWESLYDHHL
IKVMDRIKTKKQKEKIIPDIMTAFNLNAEEYEKKYPNCFTSDLSETKTNFSVTWSPCTDM
VELGNQDYNNAVIDRFRKAFLSNPRIRYNSAYSKEMNVTSKAKDVTELVRSCLTTLSCDT
SGMDPQQLEDEIDISTGGIKVERTSKSQEWIKKNDCLTRNRNEFNMRETSKDNKVIYFKG
LSVMNVSMSKKKRIIKHEELKGKITKGLEYDTSERQYDPNDDYVSLDLSSFTHAKKLIRH
DNEESLEWCSQIQDGLFVLHNSDIRENCKVATVYNNYTKNPENLFTQSTIIKTEMETCKK
INKLCNDLAIYNYAEDMMQISKGLMVADRYMTKESFKILTTFNTSMLVLAFKGDGLNTGG
SGVPYILVHMVEETLSEQFSVCYTKEIYSHFSFGSHVVYIMRPQRLNQVRLLSLFKSPSK
VPVCFAQFSKKAHELEGWLKIKDMQEVQTLSMSSNVRRIMRNIVFSSVMIGTVTKLSRMG
IFDFMRYAGFLPLSDYSNIKEYIQDKFDPDITNVADMFFVEGIKKLLLKMENLNLSTSAK
PVVIDHENDVIGGITNLNIKCPITGATLKTLEDLYNNVYLAIYMMPKSLHNHFHNLTSLL
NVPAEWELKFRKEMGFTLFEDIYPKQKMFQDNELFSINGVLNLKSLSDYYASTVENVGLM
RTEIENKEDFLSPCYKISTLKSSKKCSQSNIICSDDIINCLQEANVRSLEDLSPKNLAIL
KGLLRTLHEDKNRLYEFFEDHSENPYYLMEKMKTIKSSEKITTGKSKTSKFIRNNHPLTV
ETYLKTKLYFRNNITVLKSKKVSEELYDLIKQYHNIMDIDMESIMNLGKGLEGKKHTFLQ
MLEFVMSKAKNASDAIDFLVSVFEKMQRTKTDREIYLMSMKVKMMLYFIEHTFKHVAQSD
PSEAISISGDNKIRALSMLSMDTITSYNDILKNSKNKSKLAFLSADQSKWSASDLTYKYI
LAIIMNPILTSGECTLMVDCLMMYVKLKKVCIPTDIFLGLRNSQEKFGTNETAIGLLTKG
LSTNSYPVSMNWLQGNLNYLSSVYHSCAMKAYHRMLESYKKCEFQTRWIVHSDDNATSLI
ADGDIDKMLTDFSSKSLSEMVFRSIESHFKSFCITLNPKKSYASSSEVEFISERIVNGAI
IPLYCRHLANCCTESSHISYFDDLMSLSINVTMLLRKGCPNEVIPFSYGAVQTQALSIYS
MLPGEINDTMRICKKAGVNLEHNEIPTNLGGWLTANVESLSLLGPSSNDQTIYYNIIRDF
LKKDDFEQVKQSTSSERFLDLRFEELKQKKERDKLELNDKKMIFLMNLFEQSSVSEDSDV
LNIGMKFQTMMTQIIRLPQFINENALSKMSSYNDFCKLYPHLRKNQQLHNSTKEIKSDED
MLIEDLDDYEKIAPANEMEEVHEIMIKNPETILIAPLNDRDFLLSQLFLYTSPAKRNQLS
SQSTEKLALDRILRSKARTFINPDSDTKMTYDENLEKKISTMKPLNEDSVSVFKTCINLV
LKDVNFAMAIPIIDNIYPCEARRRDNYNFRWFQTEKWIPVVEGSPGLVVMYSIYGSDYIE
KLGLKNIPLTDNSINVLTGTFGSSLMLEDVKYYVKGLEVFETEEFQNSNRCQRAVKACNY
MITAQNRLLAINTCFSRKNFPFYSKFNLGRGFVSNTLALMSSIYSKEESFHFMSNVHFKI
DKSIRAIISAQQDLNLERILDTAVYISDKMQAIFPDITRFDIMTILKNVCIDSVSIWDTL
DSKMDKINHAMERKMTTSNILLSHNSELNTIQKQIIWLYNMGLCSKKTLNFVIRYIRRSD
VRYVRTEEQDSFGNYVSGTVYKIGTMNQNNYVQLMASETDIAISLRTPYDIRDERDVLYS
AHKDSIEKLLSKFLFDKGNVIRSKQSQTVFLNPGQACLRTTTDGKLIAKVNPTPKLLKVD
NVKLIMDINYENVNSDVWSIIESQKQIDLRLPETGECYSEMYKTIDSEQGLIYEMKSNLI
KSLTFINTFADLNESVYSIDDEVTRETIFDFIDSIRNDCLEGLETSKSVEEYEEFLDTHG
FRETVSLFKNMIESLESLDAEYSPIFLNITDKYQKFSEDLGNFKSMLLMLKYSLVNDASG
FKSYRATGAHAIGLTMKKHIEIGEFNLLGLIQLIKACESCHNSDSILNLVSLRNVLSKTY
TISSRKIQLYYNINLQNDLMERSYDFKTLVLPDINLSDYSKEILKENGFVVSGENIKIDR
EIGDEDFVGLASFDVMRLDEEQMFDEIVKDMKIKRKKKGYLFPSNTLILSEMIKFLINGN
KRTSFDVESLLRNSFNVTIFAGSRLGKVSTSVPSLKIYSTVFMEYEKRDCPLNEISECLE
GFLKITKSEISEPILEGKLKKVLIQLRNEKNKSKKLEVFRAIYGFLSNNPLCLTDKTLYG
RMTFEDINRYIMETREIIINKIKELDDGDSSDSIEILLKYLNEAN
NT seq
8598 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattacaaagcaagattattaatagaaaattctgttactctactatcgtcaatt
gatgattgtatcaaaagcaatttagagttaagcagagacctccataaaaagaacccagat
gaaataagtgaagatattattataaataacaatgctaaaaactatgaagctttaagaact
ctaatagcaagaattactagggatggtgaagggattgaaacaggattggctacagttgac
atgaaaaagatatctgaagacatgactctccttgagcagaaatatcttgaaactgaatta
gctagacatgatatgttcggtgagctggtttcaagacatttgcatttaaaacctaaaaaa
agacatgatgtggagatagagcatgctgtcagagagtattttgaagagctaagcaagaaa
gaatgttctaacagactgtctgaagaagatttcaaaaaggtcagtaaagaatatgttgct
accaacgctactcctgataactttgtgatatacaaagaatccaagagtggtcctctttgc
atgatgatctatgattggaaaatttctgttgatgctaaaacagaaactaaaacaacagag
aaatattacaaaaacatatggaaatcattgaaagatgtgaaagtcaagggtaaatctttc
ttggaagaacatcccatattcatctctattgttattcttaaacctattggatctatgcct
atagtggtcacgactagcagagtcttagagaaatttgaagattcagaatctgcattgcat
gccaacaggttgagacacgcaagccaatcaaagcttgtcggggtgtctaacataggccgg
ataattggcacaactcctactgttgttagagaattttatgcagacacccaaaagttaaaa
attgaatttaggagcatactgggtgaagagttcggctctaaagacatattttttagtcat
tggacaaataaatataaagacagagatccaacacagattgctcattcagaggatttggag
aagataattgaatcaatggtaacagatgacataagtagggaagaaattgtccattttatg
tttgggaatttttgcttgcatatagagacaatgaatgatcaacatattgctgatagattt
aatgggtatagatcctcttgtgtgaatctgaatgtagaacctaagaaagacatttcagaa
ttaaaggatcatctgttatctactaagggtttgtgggaatctttatatgatcatcacttg
attaaggttatggataggataaaaacgaaaaaacaaaaagaaaagattatacctgacata
atgactgcattcaacttgaatgctgaagagtacgaaaagaaatacccaaattgtttcaca
agtgatctctctgaaacaaagacaaatttttctgtcacttggtcaccttgcactgatatg
gtggaactaggaaaccaagattataacaatgcagttattgatcggttcaggaaagctttc
cttagcaatcctaggatcagatataattcagcttatagcaaagagatgaatgtgaccagc
aaagcaaaggatgtgactgaacttgtcaggtcctgtctaacaactctaagctgtgataca
agtggaatggacccccaacaattagaagacgaaattgacataagcacaggtggtataaaa
gtggaaagaactagcaaatcacaagaatggattaagaaaaatgattgtttgactagaaat
agaaatgagtttaacatgagggaaaccagtaaagataataaagtgatctatttcaaaggt
ttgagtgttatgaacgtgagcatgagtaaaaagaaaaggataataaagcatgaggaacta
aaagggaaaatcacaaaaggtctagaatatgatacatcagagagacagtatgaccctaat
gatgattatgtaagtttggatttatcttcattcacccacgcaaagaagcttatcagacat
gataatgaagagagcttagaatggtgctcacagatccaagatggattatttgttctccat
aactcggacatcagagaaaattgcaaagtggctactgtttacaacaattatacaaaaaat
cctgaaaatcttttcactcaatcaactatcataaaaacagaaatggaaacttgtaaaaag
ataaacaaattatgcaatgatctggctatatataattatgctgaggacatgatgcaaata
tctaaaggtttgatggttgctgacaggtacatgactaaagaaagtttcaagatattgaca
acattcaatactagcatgctagttttggcttttaaaggagatgggctaaacacaggaggg
tcaggagtcccttacatactagtccacatggtggaagagactctatctgagcagtttagt
gtgtgttacacaaaagaaatatatagtcatttctcatttggtagtcatgttgtatatatt
atgaggccgcaaaggctgaaccaagttagacttcttagccttttcaaatctcccagcaaa
gttccagtttgttttgctcagttttccaaaaaagctcatgaattagaagggtggttgaaa
ataaaagatatgcaagaagtgcaaacactaagcatgagctctaatgtaagaagaataatg
agaaatattgtcttttcttctgtcatgataggaacagtcacaaagcttagcaggatggga
atctttgacttcatgagatatgcaggattcctacctttatcagactattcaaatataaaa
gaatacatacaagataaatttgatccagacataacaaatgttgctgacatgttctttgtt
gaaggaataaaaaagcttcttctcaaaatggagaacttaaatttaagtacaagtgcaaaa
cctgtggttattgatcatgagaatgatgtgatagggggaatcacaaatttgaacataaaa
tgcccaatcacaggtgctactcttaagacattagaagatttatacaacaatgtttatttg
gcaatatatatgatgcctaaatcactccacaatcatttccataatttgacaagtctacta
aatgtacctgcagaatgggagttaaagttcagaaaagaaatggggtttactttatttgaa
gatatctatccaaaacaaaagatgttccaagacaacgagttattttctataaacggtgtc
ttgaacttaaaatctctttctgattactatgcatcgactgttgaaaatgttgggctgatg
agaactgaaattgaaaacaaagaagacttcttgagtccttgttacaagatttccactttg
aaatcttcaaaaaagtgttctcaatctaatataatttgttcagatgatataattaactgt
cttcaagaagcaaatgttagatcactggaagatttgagtccaaaaaatttggcaatcttg
aaaggtttgcttagaactcttcatgaagataaaaacaggttgtatgaattttttgaagac
cactctgaaaacccttattaccttatggaaaaaatgaagacaatcaaatcttctgaaaaa
ataacaacaggtaaatcaaaaacatctaagttcattcggaataaccatcctttaacagtg
gaaacatacttgaagacaaaattatatttcaggaataatataactgttcttaaatcaaaa
aaagtgtctgaagaactgtatgacttaatcaaacaataccataatatcatggacatagac
atggaatctataatgaatttagggaaaggtctagaaggaaaaaaacacactttcctgcaa
atgttagaattcgtcatgtctaaagctaaaaatgcttctgatgcaatagattttttagtt
tctgtatttgaaaagatgcaaagaactaaaacagatagagaaatttacctcatgagtatg
aaagtaaaaatgatgctttatttcatagaacatactttcaagcatgttgctcaaagtgac
ccttcagaggccatatccattagtggtgacaataaaataagagcattatctatgttgtcg
atggacacaataacatcatacaatgatatattgaaaaacagcaagaacaaatctaagtta
gcatttttatcagctgatcaatctaagtggtcagcttctgacctaacatacaagtatata
ttggccattataatgaatcctatattgacatcaggtgagtgcacattaatggttgattgt
ctgatgatgtatgtgaaattgaaaaaggtgtgcattccaacagacattttcttaggttta
aggaattcacaagagaaatttgggactaatgaaacagccattgggttgctcaccaaaggt
ctttctactaattcttatccagtaagcatgaattggttacaaggaaatcttaattattta
tcttctgtttatcattcttgcgctatgaaagcttatcatagaatgcttgaaagttacaaa
aagtgtgagttccaaacaagatggattgtccattccgatgacaatgcaacatctttaatt
gctgatggtgacattgacaaaatgttaacagatttcagcagcaaaagtctttctgaaatg
gtttttagaagcattgaatcacattttaagagtttttgcataactctgaatcctaaaaaa
agctatgcttcctcttcagaagttgaatttatctccgaaagaatagtaaatggagctatt
atacccctatattgcagacatttagccaattgctgcactgaatcgtcacatataagttat
tttgatgacttaatgtcactaagtataaacgtaacaatgcttttaaggaaaggatgccca
aatgaagtcattccattttcttatggagctgttcaaacacaagctttatccatttactct
atgttaccaggtgaaattaatgataccatgaggatatgcaagaaagcaggtgtgaatctg
gaacataatgaaatacccacaaatctaggtggatggttaactgcaaatgtggaatcattg
tcactattaggtccatcatctaatgatcagaccatctattacaatataatcagagatttc
ttaaagaaagatgattttgagcaagtaaaacaaagcacatcctctgaaaggttccttgat
ttaagatttgaagaacttaaacaaaaaaaagaaagagataaattagagcttaatgataaa
aagatgatctttttaatgaatctatttgagcagtcttctgtatctgaagattctgatgtt
ttaaatatagggatgaaatttcagacaatgatgactcaaataattaggttgcctcagttt
ataaatgaaaatgctttgtcaaaaatgtccagttataatgatttttgcaaattataccct
catctaagaaagaatcaacaacttcataatagcactaaggaaatcaagtctgacgaagac
atgctgattgaagatttagatgattatgagaaaatagctcccgcaaatgagatggaggag
gtgcatgaaataatgataaagaaccctgaaactattttaatagcaccattaaatgacaga
gattttttgttaagccaattatttctgtacacaagccctgcaaagaggaatcaattgtca
agtcaatctactgagaaattggcattagacaggattttaagatcaaaagctagaaccttc
ataaacccagattctgatacaaaaatgacttatgatgaaaacttagaaaagaaaattagt
acaatgaaaccattgaatgaggactctgtgagtgttttcaaaacatgcataaatttggtg
ctgaaggatgtgaattttgctatggctataccaattattgataacatttatccatgtgaa
gccaggagaagagataactacaatttccgctggtttcaaacagaaaaatggataccagtt
gtagaaggttcaccaggattagttgtgatgtactcaatatatggttctgactatatagaa
aaattagggctgaaaaatatacccttgacagataatagtattaatgttttaacaggcaca
tttggatccagcttgatgttggaggatgtaaaatattatgtcaaaggtcttgaagtattc
gagactgaagaattccaaaattctaatagatgccagagagcagtgaaagcttgcaattac
atgataacagcccaaaataggttgcttgctattaacacgtgtttttcaagaaaaaatttc
cctttctattctaaattcaatttaggcagaggctttgtatcaaacacattggcattaatg
tcaagcatttacagtaaagaagaatcatttcattttatgtcaaatgtgcattttaaaata
gacaaatccataagagctataataagtgcacaacaagatctaaatttggagagaattttg
gacactgctgtgtacatttctgataagatgcaagctattttcccagacataactagattt
gacatcatgactattttgaaaaatgtttgcattgacagtgtttccatttgggatacatta
gattcaaaaatggataaaataaatcatgctatggaaaggaaaatgactacatctaacatt
ctcctgtctcataacagtgaattaaacacaattcagaaacaaataatttggttgtataat
atgggtctatgttctaaaaagacactgaactttgttataagatatataagaaggagtgat
gtcagatatgttaggacagaagaacaagacagttttggaaactatgtttcggggacagtt
tataagattggcaccatgaatcaaaataattatgtacaactgatggcttctgaaacagat
attgcaatttctttgagaacaccatatgatataagagatgaaagggatgtgctatacagt
gcccataaagatagcattgagaaacttctatcaaaatttttgtttgacaaaggtaatgtg
atacgatccaaacagagccaaacagttttcctaaacccaggccaagcttgtctaagaaca
acaactgatggtaagcttattgcaaaagtaaatccgactcctaaattgctgaaagttgac
aatgtaaaactaataatggacatcaattatgaaaatgtgaactctgatgtttggtctata
atagagagtcaaaaacaaattgatttaagacttccagaaacaggtgaatgttactctgaa
atgtataaaacaattgattcggagcagggtttgatttatgaaatgaaatctaatttgatt
aagtcattgacttttataaacacatttgcagatctgaatgaatctgtttattctatagat
gatgaagtcacaagagaaaccatttttgatttcatagatagtataaggaatgattgtcta
gaaggtttagaaacttccaaaagtgttgaagagtatgaagaatttttggacacccacggg
tttagggaaactgttagcctttttaaaaacatgatagagagtttagagtcattggatgct
gaatatagccctatattcttgaatataactgacaaatatcaaaaattctctgaggattta
ggaaatttcaagtcaatgttgttgatgttgaagtattctctagtgaatgatgcttctggc
ttcaaaagttacagagctactggtgcacatgcaattggtttaacaatgaaaaaacatatt
gagataggagaattcaacttattaggcttgatacagttgatcaaagcttgcgagtcttgc
cataatagtgattctatattgaatctagtgagcttgagaaatgttctaagcaaaacatat
accatttctagtaggaaaatccaactatattataatataaacttacagaatgatttgatg
gagaggagttatgatttcaagacattggttttaccagatattaatctgtctgattattca
aaggaaatactgaaagaaaatggttttgttgtttctggtgagaacataaaaatagataga
gagattggtgatgaagattttgttggtctagctagttttgatgtcatgagattggatgaa
gagcaaatgtttgatgagatagtaaaagatatgaaaataaaaagaaaaaagaaaggatat
ttgtttccttctaacactctcatacttagcgaaatgataaaattcttgataaatgggaat
aaaaggactagttttgatgtagagagtctgcttagaaacagtttcaatgtgactattttt
gccgggagcagattagggaaagtaagcactagtgttccttctttgaagatctattcaaca
gttttcatggaatatgagaaaagagattgccctttgaatgagatatcagagtgcctagaa
ggatttttaaaaataaccaaatcagaaatttctgaacctatacttgagggaaaattaaag
aaggttttgattcaattaagaaatgaaaaaaacaagagcaagaaattggaagtctttaga
gcaatatatgggtttttatcaaataaccctttatgcttgacagacaaaacattatacggt
agaatgacatttgaagatatcaacagatacatcatggaaactagagaaataattataaat
aaaatcaaagaacttgatgatggtgattcttcagacagcatagaaatacttttgaaatat
ttgaatgaagcaaactaa
DBGET
integrated database retrieval system
