KEGG   Viruses: 1724827
Entry
1724827           CDS       T40000                                 
Symbol
PMMoVgp1
Name
(RefSeq) Pepper mild mottle virus; replication-associated protein
Virus
12239  Pepper mild mottle virus
SSDB
Motif
Pfam: RdRP_2 Vmethyltransf Viral_helicase1 ToMV_Hel_N AAA_19 RdRP_3
Other DBs
NCBI-GeneID: 1724827
NCBI-ProteinID: NP_619740
RS: NC_003630
UniProt: P29098
LinkDB
Position
NC_003630:70..4908
AA seq 1612 aa
MAYTQQATNAALASTLRGNNPLVNDLANRRLYESAVEQCNAHDRRPKVNFLRSISEEQTL
IATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSTTYDIGGNFAAHMFKGR
DYVHCCMPNMDLRDVMRHNAQKDSIELYLSKLAQKKKVIPPYQKPCFDKYTDDPQSVVCS
KPFQHCEGVSHCTDKVYAVALHSLYDIPADEFGAALLRRNVHVCYAAFHFSENLLLEDSY
VSLDDIGAFFSREGDMLNFSFVAESTLNYTHSYSNVLKYVCKTYFPASSREVYMKEFLVT
RVNTWFCKFSRLDTFVLYRGVYHRGVDKEQFYSAMEDAWHYKKTLAMMNSERILLEDSSS
VNYWFPKMKDMVIVPLFDVSLQNEGKRLARKEVMVSKDFVYTVLNHIRTYQSKALTYANV
LSFVESIRSRVIINGVTARSEWDVDKALLQSLSMTFFLQTKLAMLKDDLVVQKFQVHSKS
LTEYVWDEITAAFHNCFPTIKERLINKKLITVSEKALEIKVPDLYVTFHDRLVKEYKSSV
EMPVLDVKKSLEEAEVMYNALSEISILKDSDKFDVDVFSRMCNTLGVDPLVAAKVMVAVV
SNESGLTLTFERPTEANVALALQPTITSKEEGSLKIVSSDVGESSIKEVVRKSEISMLGL
TGNTVSDEFQRSTEIESLQQFHMVSTETIIRKQMHAMVYTGPLKVQQCKNYLDSLVASLS
AAVSNLKKIIKDTAAIDLETKEKFGVYDVCLKKWLVKPLSKGHAWGVVMDSDYKCFVALL
TYDGENIVCGETWRRVAVSSESLVYSDMGKIRAIRSVLKDGEPHISSAKVTLVDGVPGCG
KTKEILSRVNFDEDLVLVPGKQAAEMIRRRANSSGLIVATKENVRTVDSFLMNYGRGPCQ
YKRLFLDEGLMLHPGCVNFLVGMSLCSEAFVYGDTQQIPYINRVATFPYPKHLSQLEVDA
VETRRTTLRCPADITFFLNQKYEGQVMCTSSVTRSVSHEVIQGAAVMNPVSKPLKGKVIT
FTQSDKSLLLSRGYEDVHTVHEVQGETFEDVSLVRLTPTPVGIISKQSPHLLVSLSRHTR
SIKYYTVVLDAVVSVLRDLECVSSYLLDMYKVDVSTQXQLQIESVYKGVNLFVAAPKTGD
VSDMQYYYDKCLPGNSTILNEYDAVTMQIRENSLNVKDCVLDMSKSVPLPRESETTLKPV
IRTAAEKPRKPGLLENLVAMIKRNFNSPELVGVVDIEDTASLVVDKFFDAYLIKEKKKPK
NIPLLSRASLERWIEKQEKSTIGQLADFDFIDLPAVDQYRHMIKQQPKQRLDLSIQTEYP
ALQTIVYHSKKINALFGPVFSELTRQLLETIDSSRFMFYTRKTPTQIEEFFSDLDSNVPM
DILELDISKYDKSQNEFHCAVEYEIWKRLGLDDFLAEVWKHGHRKTTLKDYTAGIKTCLW
YQRKSGDVTTFIGNTIIIAACLSSMLPMERLIKGAFCGDDSILYFPKGTDFPDIQQGANL
LWNFEAKLFRKRYGYFCGRYIIHHDRGCIVYYDPLKLISKLGAKHIKNREHLEEFRTSLC
DVAGSLNNCAYYTHLNDAVGEVIKTAPLGSFVYRALVKYLCDKRLFQTLFLE
NT seq 4839 nt   +upstreamnt  +downstreamnt
atggcttacacacaacaagctaccaacgccgcattagcaagtactctccgagggaataac
cccttggtgaacgatcttgctaatcggagactgtacgaatcagcggtcgaacaatgcaat
gcacatgaccgcaggcccaaggttaattttttaaggtcgataagcgaagagcagacgctt
atcgcaactaaggcctaccctgagttccaaatcacgttctacaacacgcagaacgctgtg
cacagtctcgcaggtggacttcggtctttggaactagaatacttgatgatgcagatcccc
tacggttcaacgacatatgatatcgggggaaattttgctgctcacatgtttaaaggtcgt
gactacgttcattgctgcatgcctaacatggacttacgtgacgtcatgcgtcacaatgct
caaaaggatagcattgaactgtacctttcaaagcttgcgcaaaagaaaaaggtaataccg
ccatatcaaaagccatgctttgataaatacacggacgatccgcaatcagtagtgtgctcg
aaaccttttcagcactgcgaaggcgtttcgcactgcacggataaagtatacgctgtcgct
ttgcacagtttatacgacattccagcagatgaatttggggcagcacttctgaggagaaat
gttcatgtctgctatgctgccttccacttttctgagaatcttcttttagaagattcgtat
gtcagtcttgacgacataggcgctttcttctcgagagagggcgatatgttgaacttttct
tttgtagcagagagtactttaaattatactcattcctatagtaatgtgcttaagtatgtg
tgtaagacttacttccccgcttctagtagagaagtgtacatgaaggagtttttggtaact
agggtaaatacttggttttgtaagttttcaaggttagatacctttgtactatatagaggt
gtataccacagaggtgtagacaaggagcaattttacagtgcaatggaagatgcttggcat
tacaaaaagactttggcgatgatgaatagcgaaagaatcctcttagaggattcatcgtct
gttaattattggtttccaaagatgaaagatatggtgatagtacctttgttcgacgtatct
ttacagaacgaggggaaaaggttagcaagaaaggaggtcatggtcagcaaggacttcgtt
tatactgtgcttaatcatattcgcacataccagtcgaaagcgcttacttacgccaatgta
ttatcgttcgttgagtcgataagatcaagagtgataatcaatggggtgactgcgcgctca
gagtgggatgtggataaggctttgttgcagtccctgtcaatgacttttttcttgcagacc
aaattggccatgctcaaggatgacctcgtggttcagaaattccaagtgcattccaaatcg
ctcactgaatatgtctgggatgagattactgctgcttttcacaattgttttcctacaatc
aaggagaggttgattaacaagaaactcataactgtttcggaaaaggctcttgaaattaaa
gtacctgatttgtatgtaactttccacgatagattggttaaggagtacaagtcttcggtg
gaaatgccggtactggacgttaaaaagagcttggaagaagcagaagtgatgtacaatgct
ttgtcagaaatctcaattcttaaagacagtgacaagtttgatgttgatgttttttcccgg
atgtgtaatacattaggcgtagatccattggtggcagcaaaggtaatggtagctgtggtt
tcaaatgagagtggtttgaccttaacgtttgagaggcctaccgaagcaaatgtcgcactt
gcattgcaaccgacaattacatcaaaggaggaaggttcgttgaagattgtgtcgtcagac
gtaggtgagtcctcaatcaaggaagtggttcgaaaatcagagatttctatgcttggtcta
acaggcaacacagtgtccgatgagttccaaagaagtacagaaatcgagtcgttgcagcag
ttccatatggtatccacagagacgattatccgtaaacagatgcatgcgatggtgtatact
ggtccgctaaaagttcaacaatgcaagaactatttagacagcctggtagcctcgctctct
gctgcggtatcaaacctgaagaagataatcaaagacacagctgctatagatctcgagact
aaggaaaaatttggagtctacgacgtgtgccttaagaaatggttggtgaaacctctatca
aaaggacatgcttggggtgtggtgatggactcagactataagtgctttgttgcgcttctc
acatacgatggcgagaacattgtgtgcggagagacatggcgtagagtcgcagtgagctcc
gaatctttggtgtattcagatatggggaagataagagctatacgctctgtgcttaaagac
ggtgaaccccatataagcagtgcaaaggttacacttgttgatggtgttcctggttgcgga
aagacaaaggagattctttcgagggtcaactttgacgaagatctagttctggtaccagga
aaacaggctgctgaaatgataagaagaagggcaaacagttctggtttaatcgtggcgacc
aaggagaatgtaaggacggtagactctttcttaatgaattacggtcgaggtccgtgccaa
tacaaaaggctgtttctggatgaaggtctaatgttacaccctggttgtgttaattttctg
gttggcatgtctctatgctccgaggcttttgtttatggagacacccagcagattccttac
atcaacagagttgcaacttttccctatcctaagcatttgagtcaactcgaggtcgatgct
gttgaaactcgcagaacaacgttgcggtgtccagctgatatcaccttcttcttgaatcag
aagtacgaagggcaagttatgtgcacatcaagtgttacacgctcggtgtcacacgaggtc
atccaaggtgcagcggtaatgaatccagtgtctaaaccacttaaagggaaggtgattaca
ttcactcagtcagacaagtcattgctgctctcgaggggttacgaagatgtgcataccgtt
catgaggtgcaaggggaaacgtttgaagacgtctcactagtgaggctgacgccaacaccc
gtgggaataatttcaaagcagagtccgcacctgttggtctcattgtctaggcatacaagg
tcgatcaaatattacacagttgtgctagatgcagtcgtttcagtgcttagagatctggag
tgtgtgagtagttacctgttagatatgtacaaagttgatgtgtcgactcaatagcaatta
cagatagaatcggtgtacaaaggtgttaaccttttcgtcgcagcaccaaaaacaggagat
gtttctgacatgcaatattattacgacaagtgtttgccgggaaacagtactatactcaat
gagtatgatgctgtaactatgcaaatacgagagaatagtttgaatgtcaaggattgtgtg
ttggatatgtcgaaatcggtgcctcttccgagagaatctgagacgacattgaaacctgtg
atcaggactgctgctgaaaaacctcgaaaacctggattgttggaaaatttggtcgcgatg
atcaaaagaaatttcaactctcccgaattagtaggggttgttgacatcgaagacaccgct
tctctagtagtagataagttttttgatgcatacttaattaaagaaaagaaaaaaccaaaa
aatatacctctgctttcaagggcgagtttggaaagatggatcgaaaagcaagagaagtca
acaattggccagttggctgattttgactttattgatttaccagccgttgatcaatacagg
cacatgatcaagcagcagccgaaacagcgtttggatcttagtattcaaactgaatacccg
gctttgcaaactattgtgtatcatagcaagaaaatcaatgcgctttttggtcctgtattt
tcagaattaacaagacagctgctagagacaattgacagttcaagattcatgttttataca
aggaaaacgcctacacagatcgaagaatttttctcagatctggactctaatgttcctatg
gacatattagagctagacatttccaagtatgacaaatcacagaacgaatttcattgtgca
gtcgagtatgagatttggaaaaggttaggcttagacgatttcttggctgaagtttggaaa
cacgggcatcggaagacaacgttgaaagactacacagccggaataaaaacgtgtttgtgg
taccagaggaaaagcggtgatgtcaccacattcattggaaacacgatcattattgctgca
tgtctgtcctctatgctaccgatggagagattgattaaaggtgccttttgtggtgatgat
agtatattatactttccaaagggcactgatttccccgatattcaacagggcgcaaacctt
ctctggaattttgaagccaagttgtttaggaagagatatggttacttttgcggtaggtac
ataattcaccatgacagaggctgtattgtatattatgaccctctaaaattgatctcgaaa
ctcggtgcaaaacacatcaagaatagagaacatttagaggaatttaggacctctctttgt
gatgttgctgggtcgttgaacaattgtgcgtactatacacatttgaacgacgctgtcggt
gaggttattaagaccgcacctcttggttcgtttgtttatagagcattagttaagtacttg
tgtgataaaaggttatttcaaacattgtttttggagtaa

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