Viruses: 1725561
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Entry
1725561 CDS
T40000
Symbol
HCRSVgp5
Name
(RefSeq) Hibiscus chlorotic ringspot virus; coat protein
KO
K27053
Tombusviridae capsid protein
Virus
53181
Hibiscus chlorotic ringspot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Viral_coat
Capsid-VNN
Luteo_coat
Motif
Other DBs
NCBI-GeneID:
1725561
NCBI-ProteinID:
NP_619676
RS:
NC_003608
UniProt:
Q9IR78
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All DBs
Position
NC_003608:2590..3627
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AA seq
345 aa
AA seq
DB search
MLQKNDPAVQRAFNAHLPWAIKLKNDGWAALSKGQKRAANRYAGGTRPVTSQIKLSTLKV
TAPVAASMRTRNPGANIRTAGKSVTVVHCEFVGNIARQTGSGLLVVERTINPSNVLSFPW
LSVLAAGYEKYRVSSLSLRYSPTCATTTEGKVILAFDKDAADASPTSKSDMYNHDGAVGV
SPWDSAMLQIPCDNVDRFINDSSSSDPKLVDFGKVVVANYGQSEGDVDVIGELFLQYSIT
LKIPQGMATPTQSGVGISSVGPSLFRVQLRDDTHVFTCNGTGRFLFFFNSTVDATSTIAG
MEVKQKSSTDDKGETTIMELLATESGGTIAILAATGTLTWWACRN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaagaatgacccagccgttcaacgtgcgtttaatgcccatttaccttgggca
atcaaacttaagaacgatgggtgggctgctctttctaagggtcaaaagagagcagccaat
agatacgcgggtggaacccgtcctgttacttctcaaattaagctgtcaacacttaaggtt
acagctccggtggccgcctcgatgcggactcgaaaccctggagcaaacattaggacggct
ggaaaatcggtcactgtcgtccattgcgagtttgtgggcaatatcgcccggcagactggt
agtgggctactggtggtcgagaggacaatcaaccccagcaacgtactcagcttcccctgg
ctttctgtacttgctgccggatatgagaagtaccgcgtgtcatcactatctcttcgatat
tctccaacttgcgccacaacaacggagggcaaggtcatcttggcatttgataaagatgct
gcagatgcttcccctacctccaagagcgacatgtataaccatgatggagcagttggagtc
tcgccctgggatagtgccatgctgcaaataccttgcgataatgtggataggtttattaat
gattccagtagttccgaccctaagcttgttgactttggtaaggtggttgttgccaattat
ggccaatctgaaggggatgtggatgtgattggagagctgttcctgcaatactccatcacc
ctcaaaatcccccaaggtatggcgacacctacacagtccggggtaggcatctcatcggtt
ggcccctccctcttccgggtccaacttagagatgacacacatgtgtttacctgcaacggg
actggtcgcttcttgttcttcttcaactcaaccgttgatgcaacctccaccatcgctggg
atggaggtgaagcagaagagttcaaccgacgacaaaggagaaacaacgataatggaacta
ctcgctactgaatcaggtggtacgatagcaatattggcggccacaggcacactcacttgg
tgggcctgtaggaactag
DBGET
integrated database retrieval system
