Viruses: 1732851
Help
Entry
1732851 CDS
T40000
Symbol
OCSVgp1
Name
(RefSeq) Oat chlorotic stunt virus; putative RNA-dependent RNA polymerase (p84)
Virus
146762
Oat chlorotic stunt virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_3
RdRP_2
RdRP_4
Tombus_P33
Motif
Other DBs
NCBI-GeneID:
1732851
NCBI-ProteinID:
NP_619751
RS:
NC_003633
UniProt:
Q83927
LinkDB
All DBs
Position
NC_003633:48..2306
Genome browser
AA seq
752 aa
AA seq
DB search
MSWPSLSGVPNGSSSVSTWLSVTHPRRSLPKELLTAFDTCNVAPEALLVLRSTSLMILEE
TCVVVGAAEMPTAEDNSGRELFIGSNGDPMERKTRTAHHAIKKTVRIKKGHRTTFAMTVA
NGAYVKFGARPLTEANVLVVRKWIVKLIADEYKDLRVCDQALVIDRATFLSFIPTMAWNN
YKFIFHGKNAVTDRVAGENLFSRIAQWANPGKXGCPVVVTGQGCVISRAPDCAQLRVKRL
LGVTKNRTCMRVSGVSPNIQIIPFNNDITTLERAIKERVFFVKNLDKGSPTKFVSPPRPA
PGVFAQRLSNTLGLLVPFLPSTAPMSHQQFVDSTPSRKRKVYQQALEDISCHGLNLETDS
KVKVFVKYEKTDHTSKADPVPRVISPRDPKYNLALGRYLRPMEERIFKALGKLFGHRTVM
KGMDTDVTARVIQEKWNMFNKPVAIGLDASRFDQHVSLEALEFEHSVYLKCVRRMVDKRK
LGNILRHQLLNKCYGNTPDGAVSYTIEGTRMSGDMNTSLGNCVLMCMMIHAYGLHKSVNI
QLANNGDDCVVFLEQSDLATFSEGLFEWFLEMGFNMAIEEPSYELEHIEFCQCRPVFDGV
KYTMCRNPRTAIAKDSVYLKHVDQFVTYSSWLNAVGTGGLALAGGLPIFDAFYTCYKRNS
NSHWFSGRKGRLKTLSSVDDSLPWFMRELGLKGKRSSAEPLPASRASFYLAWGVTPCEQL
ELEKYYKSFKLDTSTLLEEHLWQPRGVFPDED
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggccctcactcagtggggtgccaaatggctcaagttcggtttcaacatggttg
tcggtaacacacccgaggcgcagtttgcccaaggaactcctcacggcgtttgatacatgt
aatgtggctcccgaagcacttttggtgttgcggtccacatcgttgatgatacttgaggaa
acctgtgtggttgtgggtgcggcagagatgcccaccgctgaggataactctggtcgggag
ttgttcattggctccaacggtgacccgatggaaaggaaaacccgcacggcgcaccatgcc
atcaagaagaccgtgcgcatcaagaaagggcatcgcacaaccttcgccatgactgtggcg
aacggggcgtatgtcaagtttggtgcccgtccattgacggaggcaaatgtgctggtcgtg
cgtaaatggatcgttaagcttattgctgacgagtacaaggatttgcgggtgtgcgaccag
gcactggttatagaccgtgccacgttcctatcattcattcctaccatggcgtggaataac
tataagtttatcttccacggtaagaatgccgtcacagatcgcgtggcgggagagaacctg
ttttcccggatcgcccaatgggcgaatccagggaaataggggtgcccagtagtcgtcaca
gggcagggatgcgtcattagccgcgctcccgattgtgcccagttgcgtgtgaagaggcta
ttgggagtcacaaagaaccggacatgtatgcgtgtgtctggggtttcccctaacatccaa
atcatcccgttcaataacgacatcacgactctggagagggccataaaagagagggtgttc
tttgtcaaaaacctcgacaagggatcgcccaccaaatttgtctcccctcccagacctgcg
cctggtgtgtttgcccagagattgtcaaatacgttgggactgttagtaccttttcttccc
tcgaccgctccgatgtcacatcagcaatttgttgatagcacgccgagccgcaagaggaag
gtgtaccaacaggctctcgaggatatcagttgtcatgggctgaacctcgagacagacagc
aaggtgaaggtgtttgtgaaatacgagaaaaccgaccatacatccaaggcagatccagtg
ccgcgggtgatttctccccgtgatcctaagtacaacctggcgctcggcaggtatcttagg
cccatggaagaacgaatattcaaggcgcttggcaaattattcggccatcgcaccgtcatg
aaaggtatggataccgatgtgacggctagggtgatccaggagaaatggaacatgttcaac
aagcctgtagctataggcttggatgcgtctagatttgaccagcatgtttcactggaagcg
cttgaatttgagcattcagtgtacctcaagtgtgtgcgcaggatggtggacaagcgtaag
cttggcaacatcctgcgacatcaacttctaaacaaatgttacggcaacacgcctgatggc
gcggtgtcgtacaccattgagggtacacgaatgagtggggacatgaacacatccctaggt
aattgcgttttgatgtgtatgatgatccacgcttatggtttgcataagagtgtcaacata
caactggcgaacaatggggatgattgtgtcgtgtttctggagcaatccgatttggccacc
ttctcagaaggcttgtttgaatggttcctagaaatgggattcaacatggccatcgaggag
ccctcctacgaactggagcatatcgagttttgtcagtgcaggccggtgtttgatggtgtt
aaatacaccatgtgccggaacccccgcactgccattgctaaagatagcgtgtatctgaaa
cacgttgatcagttcgtcacatattctagctggctgaatgccgtggggacaggtgggttg
gcgctggcgggtggtttgcccatctttgatgcgttttacacctgttataagcgtaacagc
aactcccactggttcagtggccggaaaggaaggttgaaaaccctgtcaagtgttgatgat
tcgctcccctggttcatgcgcgagcttggactgaaagggaaaaggtcgtcagccgagccg
ttaccagcgtctcgtgccagcttttacctcgcatggggggtcaccccctgtgagcagttg
gagcttgagaaatattacaaatcgttcaaactggacacgtccacattgcttgaggagcat
ttgtggcagcctcgcggggtgtttcccgatgaggattga
DBGET
integrated database retrieval system
