Viruses: 19493256
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Entry
19493256 CDS
T40000
Symbol
CarMVgp6
Name
(RefSeq) Carnation mottle virus; capsid protein
Virus
11986
Carnation mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Carmo_coat_C
Viral_coat
Capsid-VNN
Motif
Other DBs
NCBI-GeneID:
19493256
NCBI-ProteinID:
YP_009032648
RS:
NC_001265
UniProt:
P04383
Structure
PDB
PDBj
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All DBs
Position
NC_001265:2669..3715
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AA seq
348 aa
AA seq
DB search
MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAEMLAGYTPAILAFTPR
RPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSFEDWVVSPRNVAVFPQL
SLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTTKVGFYDLGKHVETA
AQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFDKADTVVGELFIQYTIVLS
DPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGKWCIIVRGTVEGGFTKPTLI
GPGISGDVDYESARPIAVCELVTQMEGQILKITKTSAEQPLQWVVYRM
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaggagaaaagatcgcgatgaatcccactgtgcaaacattggcgcagaag
ggggacaagttagccgtgaagttggtgacaagagggtgggcctctctgagtacgaaccag
aagaggagagctgaaatgcttgctggatacactccagcgatcctagccttcacaccccga
cgaccacggatgacgaaccctcctccaagaaccagtaggaattcaccaggacaagctgga
aagtccatgacgatgagtaagaccgaactattaagcaccgtcaaaggtaccacgggtgtt
atcccaagctttgaagactgggtcgtttccccccgaaacgtagccgtcttccctcaactc
tcgctgctggcgacgaacttcaacaagtaccgcattactgcgctcactgtgaagtactca
cccgcgtgcagcttcgagaccaatgggagggtggctctgggattcaacgatgacgcttcg
gacacaccaccaaccaccaaggttggattttacgatctgggcaaacatgtggaaactgct
gcacagacagctaaggatctagtgataccagtagacggcaaaacccggttcatcagggac
tcggctagtgatgatgccaaactagtcgattttggacgaatagtcttgtcaacatacggg
tttgacaaggctgacactgtggtgggcgaattgtttatacagtacacgattgtgctgagt
gacccaaccaagacggccaaaatttcacaggcaagcaacgataaggtgtcggacggacca
acgtatgtggtcccttcggttaatggcaacgagctacaactaagagtggtagccgctggg
aaatggtgcattatagtgcggggtacggttgagggaggcttcaccaaacccacacttatt
gggccgggaatcagcggtgatgtggactatgaaagtgccagacctatcgccgtttgtgaa
ttggtgacacaaatggagggccagatattgaaaatcaccaagacctcagcagaacaacca
ctccaatgggttgtttataggatgtga
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