Viruses: 19593519 Help Entry 19593519          CDS       T40000                                  Symbol GV81_gp1 Name (RefSeq) Nienokoue virus; polyprotein   KO K24570   Flavivirus structral polyprotein Virus 1286143  Nienokoue virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Flavi_NS5 Flavi_NS5_thumb Flavi_NS1 Flavi_DEAD FtsJ Peptidase_S7 RdRP_1 ResIII Helicase_C Flavi_glycoprot Flav_NS3-hel_C Cas3-like_C_2 SpoIIE_N Motif Other DBs NCBI-GeneID:  19593519 NCBI-ProteinID:  YP_009041466 RS:  NC_024299 UniProt:  A0A059PBC0 LinkDB All DBs Position NC_024299:99..10169 Genome browser AA seq 3356 aa AA seqDB search MERKKGVNYGRREAIPPPPIKEKKDRKKKRDDVKKGLVLRGTKPIRRKFGLGTKTEWENW IGLLRSDVTTGVVYLAMVLLMMLKQLRDRVWGLSRRVTRLEQRRGAQRGLQGIGLLTLIM VTFAAVVDVNMSLDGTVQLFMGGKNVTDHRRVFKLPTDICPNGVLVEKQCPKVASDMDKN LDAIDCGSTWIEFTLRYYRCVVRRPVRRDVTPAASKKMDFLAELEIIAFKTIRENKTIVC VILLCVAIAKRWPIWLVILFSIGTWTTVSGEYLEPLYTLKAEGMTMIQTTLRPQEGYATS TINGLLEMQTERAFVYGGQQQRLLVGDCHVNATYSTDICPGGSQLNMPSISGPGRVCSSQ PYNRGWGTGCFKWGIGWVGTCVELSCADQYNVSSLSRSVVTXEVTARYHSINNTQAVVSD VPVTFTFGKLGHATMTCRLESERLMTDYYYVTGEKHEGLFLKSQIEDWPGMSNVNGRYVG GEHVVVWGDVKPNEILVKHVLDPGFEWEKSITTHDGFLDTGFVCQIMLDKLVTGNFVDCP SLRSSVFVQNGLGYSGVVITTLNQPTNSTCSVPLKCDGCHLMASKMVFMNKHAEARAWVG CGNRTATLTVGTSTLQVECKFNPITQAFRLTRHLYNRYTRFGYDGIGGVWHDLVGKISMW KLMMSPIVLVCLAGLVFVDRKILVFLALLGMIYYVRADVGCGFDPDRKIVSCGSGTFVWK SIAEWPTRDHAVELEDRYLVTSLLESLLEVNSKVCILCEDVLQCAAARSLVEKIPAVGDG LVYANVSSSYERVFPQMEKNVHVVRLGDSTMKLAMIKIEGDVQESALGELPTSMWSRACV NETKSDKVIRVLTSGQDPRQVCEVAVGFQYEFVHYSRKMFGSNVVVKPSEVPSAFCPTYL AGVAMKNDRAVFTDGMMWMSSRRAGNGTWKLDQLELTQSHQCVWPMAYTVDAATPKDKRL FMPPLYGGPISFANHIPGYKTQDEFPWDKASVQLRFGPVPGTTVEQDPHCGDRGSAMRVD PLLVKKWCCKTCLAFLTEPIHFEADDFLYYPMEIRPKATESAEKVLLSDEPEDEIPRVDD LLDKMEEKAHKTTSRWTQPIGGAEATQSFFPQGPPRDETNLFLVGLLLYVLTARTRHQWI ARVIGTWGIFILLGSPVFSAYLSWWWLACSSALGYVPNGSSMLVHFWLGMRLTSTHLFLT GWEIRKRTGSLKLLLVQWLTMWIQFLTPWLMTIVDNIVFPLYVTSAFGVFRVMESHRAGL IDVLVILRHLINHFLWGSLTLIIGTCLLLFWPCVERYVYSGTLWKSGLRSITSWAMRCMY FLTLYVVAASLEYIGLGSTGVVVGVGGLVAWLLITMGPPGGLELVSVEGDGIPTGCDEEE PKPLPENLSGRFAPEGVELIGYTDAGTVSAGVAILALSIGLMAINVYVGGTVLILAWVTR ASIWVPRLISGSTAQRSDLLLPRIVLPELNLHPTFGHLPDGVYQVVANSLFHRRAVGVGV AKGGVFHTHLHVTGGANLKWQGRMVRMYSGDVRRDLAAYGGDWNIAGSSEPEVVIRAVQP DGSVSCARIGVVTLDVDGQHVMAVEKDFGFGSSGSPIYSLDGRLIGIYGYGFYFGNRYYS LVSNGDGLVEVGEVEDVSREFIDWHPGRGKTRTVVVEKAKEHIAAGKRLLVLAPTRVVKD EVARAIKENCPNVVIGQNLAMYRTNAVTVACHATLMQYILEHGLDSVKFSTIIMDECHFL DPLSIACRGVMDYHNGKGVRIVYMSATPPGLPGNSGSNFPIEDVAVKFPAKDVDARFIIG KAEGKTVVFVPTISRAVTLAKELGGVALTRETFDAAMPEARKPDLRFVISTDISEMGANL GAQTVIDTRQAVRPILSDEGVVLRRVGITRSSAIQRRGRVGRRQPGTYIYPVDVELEEDP ATWVCWTEAQMILDQLSCHPMREEREFFEPLGTYKLDAGAVKRLVDLMKQQVPVWLAWNW AKSHEIKHSVLFQGRRLGQCLTIRTPSGSHAYAPKYYDERFEKEKDEDKKARIGFFLKQR SLFIDFPGLMSGIYTVLTSTSASIFKDSVKDALDELHDISRVTDPKVPRQVVGDSLKAWM AVLIGAVAGVIALVFLVLLWRGLRFIFSGKKAAVPAMCSHETAYFQQVATVVMSFGPICA VFSGVPPVFVFIVTVALVIILCFGAANSQRGFAENDVVKLVILLAVVASAVVAWELNLLP NVRRDLISVATYMATRRDDAVIGSVFNFGNDMLGLSMTGTLLVSYAGSGVFGPLVSAFAE GCWLARVTNEPGASETIGGFQLTMIPWTSTIPAVVGVFLATNTLSKVFGGGLALTYLVLS VYDKKYAFTARPVRVMLAKSTRREVDXEITARDGISRCRQLFFGLQAFVALLWMLSNPCW QNLVPFIFVGVYCFLVLIKPNNPIHNAIDYTFVTLLLVCFEPGNLMFGGGCLILWFILHP DRLDMRRSLMKTDACGLGYRWKTLLNGLSSAAFEKYKSRGVDETEKGDYVSRGGLKLDEI IKRHGWEPKGLVYDLGCGRGGWTQRLVMDQRVSKVLGFTLGGRSREDPQRFMTRGYNLAV LKSGVDVYGLTPKECNTIVCDIGESDSSPHIEKTRTLKVLGLLENWLKLSPRAAFCCKVL SPYHLEVLRKLEALQHEYDGRLVRVSLSRNSTAEMYYISGKRSNIVAAVYFLLGSLLGRF RRDEPAIVGDGPTLEKGTRSDPAAKIKKQDMSVIQRRLKLLERENKATWFVDKEHPYQSF GYHGSFVTDDISPGGQTVNPLIRRVMWPWDFLSRVTTFMMTDVSTYAQQKILREKVDTLT EEPSMEIKALNRLIMRKIVELYRKKHLKPRILTPCEYLANVKNDAAIGGWMKSLDWPSVQ EALADPRFWELVDRERKLHLQGDCELCVYNTMGKKEKKPSVCGEAKGSRTIWYMWLGCRF LEYEALGFLNEDHWVSREYLPCGVGGIGVNYFGYYLEEIARKGHWLVADDVAGWDTRITE SDLEDELFFLLELAQDDYHRKLMSSVYKMAYRNIVALFPRNHPKYRSGTVLDVLTRTDQR GSGQVVTYAMNTITNAKNQVGRVLEAEGLLDAPLNTIETWLDKNLVETLSAMVVAGDDVV VATNNDAFHTSLKYITATSKIRKNLNLTDPSPRYTSWQEVEFCSHHFHPLTLSDGRSLVV PCRDQNEILGRSRVQKGGIVSMSAAGCLAKAHAQMWALYFFHRRDLRLGFAAITSIVPKH WVPTGRVSWSVHQKKEWMTTRDMLEVWNDVWIRDNPWMKTKERIDSWKLIPYLPKTTDIK CGSLIGEKDRAAWSRELPNTVERARQIIENEQGPQKFMEGLDILGRYRQPIPRMFD NT seq 10071 nt NT seq  +upstreamnt  +downstreamnt atggagcgaaagaaaggagtaaattatgggagaagggaagctatcccgccccctcccatt aaggagaaaaaggatagaaagaagaaaagagatgacgtgaagaaaggtctcgtattgcgc gggaccaagcccattcggcgtaagtttggtctagggaccaaaaccgagtgggagaactgg attggactacttagatcggatgtcacaactggagtggtgtacctcgcgatggtcttgctc atgatgctaaagcagttgagggaccgggtttggggtttgtcacgccgtgtgacgagactg gaacaacgaagaggtgcccagagaggactacaaggaatcggattattgactttgataatg gtgactttcgcagctgttgtggacgtgaacatgagtttggatggaacagtgcagttgttt atgggggggaaaaacgtgacggatcaccgccgcgtttttaagttgcccacggacatatgc ccaaacggagttctggttgaaaaacagtgcccgaaggttgcctctgacatggataagaac ctagacgcaattgactgtggatcgacgtggattgagtttaccttgcgatactatagatgt gtggttcggagaccagttcgtcgagatgtcacgccagctgcaagcaagaagatggacttt ttggccgaacttgaaataatcgcttttaagacaatacgggagaataagaccatagtgtgt gtcattctgttgtgtgttgccatagcgaagagatggccaatttggctggtgatcttgttt tcgattggaacttggacgactgttagtggtgaatacctggaaccgctgtacacgctaaag gcagaggggatgactatgattcaaaccaccttaagaccacaagaaggatatgcgacttcg actataaacggacttttggaaatgcaaacggaaagagcttttgtgtatggaggacaacag caacgacttttggttggggactgccatgtgaatgccacatattcgacagacatttgccca ggaggttctcaattgaacatgccatccatttctggtcccggacgagtgtgctcatcccag ccttataaccgaggctggggtacaggatgctttaaatggggaataggctgggtgggcaca tgtgtcgagttgagctgtgctgaccaatataatgtgagctctttatctagatctgtggtg acawtggaagttaccgccagataccactcgataaacaatacgcaggctgtggttagtgat gtcccagtgacttttacttttgggaagctgggtcatgctaccatgacttgtcggctggag tcggagcggctaatgacggactactattatgtcactggtgagaaacatgaagggctcttt ttaaagagtcagatcgaggactggcctggaatgtcaaacgttaacggacggtacgttgga ggagaacatgtggtggtctggggggatgtgaaaccaaatgagattttggtgaagcacgtc cttgacccaggttttgaatgggagaaatcgataacgacacatgatggatttttggacacc ggatttgtttgtcagattatgctggataagttggtgacgggaaatttcgtggattgccca tcgctacggtcctcggtttttgtgcaaaatggcctgggatatagtggagtggtgatcacc acgctgaaccaaccaacgaatagcacttgttcggtgcccctgaaatgcgacggatgtcat ttgatggcatcaaagatggtgttcatgaacaaacacgctgaagctagagcctgggttggt tgtgggaaccgcactgctaccttgactgtgggaacgtccacgctccaggtggagtgcaag ttcaacccgatcacacaggctttccggctgacgcgacatctatataaccgatacacccga tttggatatgatggaattggaggagtatggcatgatcttgtgggaaagatttcaatgtgg aagcttatgatgtcgcccatagtgcttgtgtgtctagcaggattagtttttgttgaccgg aagatcttggtcttcctggccttgctgggcatgatttactatgtacgagcagacgtggga tgtggcttcgaccctgacaggaaaatcgtgtcctgtggtagtgggacattcgtgtggaag tctattgccgagtggcccacccgagaccatgcagttgagttggaagataggtatttggtg acgtctttgttggagagcctgttagaggtgaactcaaaagtgtgcatattgtgtgaggat gtgttgcagtgtgctgcagccaggtcgcttgtagaaaaaatccctgctgtgggagatggc ctggtttatgcgaatgtatcatcatcttatgagagagtgttcccacaaatggagaaaaat gtgcacgtggttcgccttggcgattcaactatgaaactggcaatgataaagattgaagga gatgtgcaagaaagtgcgttgggagagttgcccacaagtatgtggtcacgtgcgtgtgtg aatgagaccaagagtgacaaggtgatacgtgtgttgacaagtggccaagacccgcgccag gtttgtgaggttgccgtggggtttcagtacgaatttgttcattacagtcggaagatgttt ggatccaacgttgtggtcaaaccgtctgaagtcccgtctgcattttgccccacatatttg gctggggttgccatgaagaatgaccgagcagtgtttacggatggtatgatgtggatgagt agtcggcgagctggaaatggaacatggaaacttgatcaattggagctgactcaaagtcat caatgtgtctggcctatggcgtacacggttgatgccgcaacacccaaggacaagcggctg ttcatgcccccgttgtatggtggaccaatttcatttgccaaccacataccaggttataag acgcaggatgagttcccgtgggacaaagcaagcgtgcaacttagatttggacctgttcct ggaacaactgttgagcaggacccacattgtggggatcgaggttccgctatgcgagttgat ccattgcttgtgaagaaatggtgttgcaagacgtgtctggcgttcttaacggagcccata catttcgaagcggatgatttcttgtattatccaatggagatacgaccaaaagctactgag tctgccgagaaagtgttgttgagcgatgaacccgaggatgaaataccaagagttgatgac ctgctggacaagatggaggaaaaagcccacaagacaactagcagatggacacaaccaata ggaggcgctgaggctacgcagtcgttttttcctcagggcccaccaagagacgagacaaat ctgtttctggtgggcctcttattgtatgtgttgactgctcgcacgagacaccaatggatt gcgagagtgattggtacctggggtatctttatattgctgggatctcctgtgttctctgca tacttgtcctggtggtggctcgcttgctcgagtgctttgggatatgtgccaaatggatcg tcgatgcttgtccatttctggcttggcatgcgcctaacatcgacccacctgtttctgacg ggatgggaaattcggaagagaacagggagcttgaaattgttgctagtccagtggttgacg atgtggattcaattcttgacgccgtggctgatgacgatcgtagacaacatagtgttccca ctttatgtgacctctgctttcggagtattcagggtcatggagagccaccgagcaggtttg atagacgttctcgttatactcagacatctgatcaaccatttcctatggggctcacttacg ctgataatcgggacttgtcttttgctcttttggccatgcgtagaacgctacgtttactcg ggaactctctggaagagtggactccggagtatcaccagctgggccatgagatgtatgtac ttcttgacgctttacgtagtagccgcgagtcttgaatacatcggcttgggttccacggga gtggttgttggtgttggtggcctcgttgcgtggctacttatcaccatgggccctcccggg ggacttgagctggtgtctgttgagggagacggtataccaactggatgtgacgaagaagaa ccgaaacccctgccagagaatctgtcagggaggtttgccccagaaggagtggagttgatt ggttacacggacgcaggaactgtttccgccggtgtggcgattttggccctgagcattgga ctgatggcgataaacgtctatgttggaggaactgtgctgatcctggcttgggtcacgcgg gcttccatctgggtgccacgcttgatatcagggtcaacggctcaacggtcggatctattg ctgcctcgcattgttttaccagagctcaacttgcatccgacttttgggcatttaccagat ggagtgtaccaggttgtggcaaactcgttgttccaccgccgtgcggtgggcgtgggagtc gccaaaggaggcgtcttccacacccacctccacgtcactggaggcgcgaatttgaaatgg caaggtaggatggtccggatgtactcaggagatgtccgtcgagatctggctgcctatggc ggagattggaacatagctgggagctctgagcctgaggtcgtgatccgggcggtgcaaccg gacggtagcgtttcgtgtgctaggataggagtagtgacattggacgttgatggacaacac gttatggcggtggagaaggattttggttttggctcctcggggtcgccgatttattcactt gatggtcggttgatcggaatttatggttatggcttttattttggaaacaggtattattct ttggtgtcaaatggcgatggactggtcgaggttggagaagttgaggacgtgagtcgggaa ttcattgattggcatccagggcgaggaaaaacacgaactgtcgttgtggagaaggcaaaa gagcatattgccgctggaaagcgcctgctggtgctagctccgacgagagttgtgaaagat gaagtggcccgggccattaaggagaactgcccaaacgttgtcataggacaaaacctggcc atgtatcgaacaaatgctgtcactgtggcttgccacgcgacactaatgcaatacatctta gaacatggcctagatagtgtcaagttctcaaccataatcatggacgagtgccacttcctg gaccctctctccatagcctgtagaggagtgatggattatcataacggaaaaggagtgaga atagtgtatatgagcgcgacccctccgggcctcccgggcaactcaggatcaaattttccc attgaagacgtggctgtgaagttcccggcgaaggatgttgacgcgcggttcattattggg aaggctgagggaaaaaccgttgtgtttgtccccaccatctctcgagctgttacgttggcg aaggagcttggcggagtagcgttgacacgagagacatttgacgcagccatgccagaagct cgaaaaccagatttaagatttgtgatatcgactgacataagtgaaatgggagcaaatcta ggagctcaaactgtgatcgacacccggcaggcggttcgtcccatcttgtctgatgaggga gtggtgttgcggagagtggggataacccgctcgtcagcaatccagcgccgaggacgagtt gggaggcgccagcccggaacttacatctaccctgttgacgttgagctagaggaggatcct gcgacctgggtgtgttggactgaggcccagatgatcttagatcaattgtcttgccatcct atgcgggaggagcgggagttctttgagccacttggaacatataagctggatgctggagcc gtaaaacgtttggtggatttgatgaaacagcaggtgcccgtttggttggcatggaattgg gcgaagtcccatgagatcaagcatagtgttttgtttcagggacgtcgcctaggacagtgt ttgacgattcggactccctcagggagtcacgcctatgccccgaaatactatgatgagaga tttgagaaggaaaaggatgaggataaaaaggctaggattggatttttcttgaaacagagg agcttattcattgactttcccggtctgatgagtggaatttacacagtgttgacgtcaacg agtgctagcattttcaaagactcagtgaaggacgctctagatgagttgcatgacatatca cgggtgactgatccgaaggtgcccaggcaggtggtgggagattcgctaaaggcttggatg gctgtgttgattggggcagttgccggagtgatcgcgctggtatttttagtgttgctgtgg agaggattaagatttatcttctcgggaaaaaaggcggctgtgccagctatgtgttctcac gagactgcgtactttcaacaggtggccacggtagtcatgagttttgggcccatttgcgct gtgttttctggggtgcctcctgtgtttgtctttattgtgactgtggctttggtgataatt ttgtgctttggagccgccaactctcagagaggattcgccgagaatgatgtcgtgaaactg gtgatcctcctggcagtcgttgcgagtgctgttgtggcgtgggagttgaacctgctgccg aatgtgcgtcgggacttgatttcggttgccacctacatggcaacgaggcgggatgatgcc gtcattggtagtgttttcaacttcgggaacgacatgctgggcctctctatgacgggaacg ctcttggtaagttatgctggaagcggtgtgtttggaccactcgttagtgcgtttgcggag ggctgctggttggctagggtgacaaatgaacctggagcctcggagactattggtggcttt cagctcacgatgatcccatggacttccacaataccagctgttgtgggcgtgtttctcgcg accaacactttgtcaaaagtgtttggtggtggtttggccctaacgtatctggtgttgagt gtgtatgacaagaagtatgctttcacggctagacccgttcgcgtcatgctggcgaagagc acccgacgagaggttgaygmggagatcacagctcgcgayggaatatcaaggtgccgtcaa ctgttctttggattgcaggcgttcgtggctcttttgtggatgttgtcaaacccgtgctgg cagaacttggttccgttcatctttgtgggagtttattgtttcttagtgttaatcaagcca aacaaccctattcacaatgctatagattacactttcgtgactttgttgttggtttgcttt gagcccgggaatctgatgttcggaggtggatgtttaatcttatggtttatcttgcatccg gaccggttggacatgagacgttctctgatgaagacggacgcttgtgggctcggctaccga tggaaaaccttactgaatggcctgtcatctgcggcttttgaaaagtacaagtcacgagga gttgatgaaacggagaagggagattatgtctcacgaggaggcctgaaactggacgagatt atcaagagacacggatgggaacctaaaggactggtgtatgatctaggatgtggacgagga ggctggacccagcggttggtcatggatcagcgagtgtcgaaggtacttggctttacgctg ggaggaagatcacgtgaggatccccaaaggtttatgactcgaggatataacttggcagtg ctaaagtcaggtgtggatgtttatggactgaccccaaaggagtgcaacaccatagtgtgt gatattggrgagagtgactcctcaccccacatagagaagacacggactttgaaagtgcta ggattgttggaaaactggttgaaactgagtccccgggcggctttctgttgcaaggtattg tcaccgtaccaccttgaggtcttgaggaagttggaggctctccagcatgaatatgatggt agactggtgagagtgtctttgagtcgcaattcaacagctgagatgtattacatttcagga aaacgctcgaatattgttgctgctgtttatttcttgttgggatctttgctcgggagattt cgtcgtgacgagccggcaattgtaggcgacgggccgacgcttgagaaagggacacgatct gacccggctgccaagataaagaaacaggacatgagcgtgatccaacgccgtcttaagctg ctggagagagagaacaaagcaacttggttcgtagacaaagaacacccttaccagtctttt ggataccatggatcgttcgtgactgatgacatctctcccggagggcagaccgtgaatccg ctcattcgtcgggtgatgtggccatgggattttctaagccgggtgactactttcatgatg acggacgtgtcaacctacgcccagcagaagattttgagggaaaaggtggacacgttgacg gaagagccatcaatggagatcaaagccctgaaccggttgataatgagaaagattgtcgag ttgtatcggaaaaaacatttgaaaccccggatattaacaccatgtgagtacctcgccaac gtaaaaaacgatgccgctataggaggatggatgaaaagcttggattggccctctgttcag gaggctttggcggacccccggttttgggaactggttgatagagaaaggaagttgcatctc caaggagactgtgagctttgcgtgtacaacacaatggggaagaaggagaaaaaaccctca gtgtgtggagaggcaaaaggctcacgcacgatttggtatatgtggcttggatgccgtttc ctagaatacgaggctttaggctttttgaacgaagatcactgggtttctcgcgagtacctt ccatgtggagtgggcggaataggagtgaactacttcggttattatctggaagaaatcgct aggaaaggacactggttggtggcggatgacgtggcaggatgggacacccgaattacggaa tcagacctggaagatgagctgttcttcctgttagagctggcccargatgattaccatagg aagctgatgtcatccgtgtataaaatggcctaccggaacattgtggctctattcccgcga aaccacccaaagtacaggagtgggacggtgctggatgtgttaacacgaactgatcaaaga ggctcagggcaagtagtaacatatgcgatgaacacgattacaaatgcaaaaaatcaggtt ggtagagtgttggaggcagaggggctcttggatgccccattgaacaccatcgagacatgg ttggacaagaatttagtggagacgctgtcggccatggttgtggctggtgatgatgttgtg gtcgccacaaacaatgatgccttccacaccagcctaaagtacattactgccacatcaaaa attaggaaaaacctaaacctgacggacccatcaccccgatatacgagctggcaggaagtt gagttttgttcacaccacttccaccccctgactctttctgatggccgatccctagtggtc ccctgtcgtgaccaaaatgagattttggggaggtcgagagtccagaagggaggaatagtg agcatgtcagctgctggatgcctggctaaagcccatgcccagatgtgggcattgtacttc tttcaccgacgtgacttaagattaggatttgctgccataacctccattgtgccgaagcac tgggtgcccacgggaagggtgtcttggtcagtgcaccagaaaaaagagtggatgacaact agagacatgttggaggtttggaatgatgtttggataagagacaacccctggatgaagacg aaagaaaggattgactcatggaagttgataccatatttaccgaagacgactgatataaag tgtggtagcttgataggtgagaaagaccgggcggcgtggtcgagggaattgcccaacaca gtggagagagcccgccagattatagagaacgaacaaggaccacagaaattcatggaagga cttgatatcctgggaagataccgacaacccatacccaggatgttcgactag

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