Viruses: 19813858 Help Entry 19813858          CDS       T40000                                  Symbol IB56_gp1 Name (RefSeq) Pitaya virus X; RdRp   KO K26615   Alphaflexiviridae RNA-directed RNA polymerase Virus 1176736  Pitaya virus X Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Vmethyltransf Viral_helicase1 RdRP_2 2OG-FeII_Oxy_2 AAA_16 AAA_22 2OG-FeII_Oxy Motif Other DBs NCBI-GeneID:  19813858 NCBI-ProteinID:  YP_009046882 RS:  NC_024458 UniProt:  A0A067XH21 LinkDB All DBs Position NC_024458:86..4759 Genome browser AA seq 1557 aa AA seqDB search MARVREVFSSITDSSLKAVIQEEAYKTIQLQLRAALSINPYSQPADTADTLENLGIITNP LAIEAHTHGAAKAIENDMYNIVANYLPKENPVTFYYMKKGKLGKFRRGPHQNDKFINSHF EPKDIARYPEETVVEHLEKTPCTTKLAFMGDTLHFWSPTQLLTLFKTSPTLKTLYATIVL PVEAINQLPSLHPTIYTLKYHGDFFMYLPGGHAGAAYTHHTKQLAWLLMGRLNDGDVTLT MQVLESKGANHLVIIQRGKFETPPLRVFGSDVPYVRMPKIFLPSQHNMNQPIPTVFAMKM FMYCKSLKEVTPRDIYAKMRQLLPDKELAKFSPNQTVHMMNYFFLIGKLDSVNTFEDVLS GSAVRRTFKPVIVWWQHFKQKLFGENDFLKLMKAVQWKPIDLTYKVEEFTEFSWRNFFLG KRVQPEPQDGDEDDFWDPKSYNPLDKGPEMTAEQLKAWDFLQQQKQGSSPSPEFHEDPLD PKSATQNTESAASEAAQETQPKGRGEGKTSQPPVEEQRSQSGGPEQGEASEASEDSTSRA HFSTGEPFVTKHGVIIHRRDPDHDPETSWKDFVARNLRFIDQVGKRQVTLYSRHSSIKTY SYGSVTHKAQPWPEALTAIAQAFNIPEEHDHCLVQKFEKSAAINYHADDEALILPGSQIT TINLGHAELRTRRNSDGEVLFQALFGACSYIMPPGFQSNFKHAVASLEDGRISITFRTSV HHKTEDTLPWKAWVPILNAAGFKALDRQVNPNDGSLILPILDIQKLPKVQAACPGLQGVL KAIHREPTPFTPDPLRAKAFGSDVKNLRIGALLRHQSTEWLETFARKTEMEPRSVGLCVI HGTGGSGKSYALQDFLRNNPEERITIILPTNELRLDWVRKLPNAHPSTLKTHEKSLLAPA SSTVIMDDYTKLPAGFIEAYINTNQGLETLILTGDPKQSFHHEPNDNAMTAKLAPFSEIA KNYCRYYLNATHRNKKDLANMLGVYSEVEGTTNITMSSSILPGRHLLVPSMYKKQAYGEM GHKVSTYAGCQGITAPEIQILIDSDTPMCSQQVMYTALSRAVHAIHFVNTGVTNDAFWEK LAATPYLAAFLRLVREEKTKEPTPTEDKATEPAGPATHFPVEDGKNFFDHITDNMPEKHE RELHSNRDGFSNCVQTEDPVVQMFPHQQARDETLFWATIEARLKITEPEKNFEEFVSKRH IGDVLFENYKLAMGLPKEPIAFDEKLWEVCADEVQKTYLSKPLHMLKNGEGRQSPDFDPK LIALFLKSQWVKKVEKLGQPRIKAGQTIASFQQEAVMLYGTMARYMRRVREVFQPKNIMI NCERTPEELSAWALENWNFKRNSYANDYTAFDQSQDGAMLQFEILKARHHSIPEVYIEGY LDLKCSSKTFLGILKIMRLTGEGPTFDANTECNIAFAHTKLKIPIGTAQLYAGDDCAFDF VPEDKPSFKKIETQVSLKAKPVIKRQIRGEWAEFCGMLITPLGVIKDPVKTWASLELAAR RGELMNLRDSYERDVALAYQHKDRLHEIFSEEQSTAHQLTVRKIVRAKGGKVFASYD NT seq 4674 nt NT seq  +upstreamnt  +downstreamnt atggctcgtgtgcgcgaggttttctcttccatcaccgactcatcactgaaagccgtaatt caagaggaggcctacaaaaccatccaattgcaattacgtgctgctctttccatcaaccca tactcacaacccgctgacactgctgacacattagagaatttaggtataattactaaccct ttggccattgaagcacatacacacggagcggccaaagctatagagaatgacatgtacaat attgtagctaactacctcccaaaggaaaacccagttacattttactacatgaagaaagga aaactgggtaaattcaggcgtggcccacaccagaacgacaagttcatcaactcccacttt gaaccaaaggacatagctagatatcctgaggagacggtggttgaacatctggagaaaact ccatgcaccacaaagctcgcctttatgggagacacgctccacttctggagccctactcag ctactaaccctttttaaaactagccccacactaaaaaccctctatgccacaattgtactt ccagttgaggccattaaccaactcccctcccttcacccaactatatacacattaaaatat catggggatttcttcatgtacctccccggaggccatgccggagcagcttacacccaccac acgaaacaactagcctggctgctcatgggcagactcaatgatggtgatgtcaccctcacc atgcaagtactagaatccaagggggcgaaccatctggtcataatccagagaggcaagttt gaaacccctcccctccgtgtctttgggtccgacgtcccctacgtgcggatgccaaaaatc tttctgcccagtcagcacaacatgaaccagccaataccgacggtctttgcaatgaagatg ttcatgtattgcaagagccttaaagaggtgactccgagggacatttacgcaaagatgcgg cagcttctgcccgacaaggagctggcgaaattctcgcccaaccagactgtgcacatgatg aactacttcttcctgatcgggaaactggactcggtcaatacctttgaagatgtgctgtca ggttcagccgtccgccgaacttttaagcccgtcattgtctggtggcaacacttcaagcag aaactgttcggagaaaatgattttctgaaacttatgaaagcggttcagtggaaacccatc gacctgacctacaaagtagaggagttcactgaattctcctggaggaattttttcctcggt aaaagggtgcaaccagaaccgcaggatggggatgaggacgacttctgggaccccaaatcg tacaaccccttagacaagggtccagagatgacggccgagcaactgaaggcctgggatttt ctgcaacaacaaaagcaagggtcaagcccctcccctgagttccatgaggacccacttgac cccaagtcagccacccagaataccgagagtgcagcgtctgaggctgcccaagagactcag cccaaggggcgaggagagggaaaaacatcacagccaccggtggaagagcagaggtctcaa tctggaggacctgaacaaggagaagcaagtgaggcatctgaggactcaactagtcgggcc catttcagcacaggagagccctttgtgacgaaacacggggtgattatccatcgtagggac cctgatcatgacccagaaacctcctggaaagacttcgtagcccgcaaccttaggttcatt gatcaggtgggcaaacgccaggtcacgctttattcgcgccattcaagcatcaagacctac tcatacgggtctgtcactcacaaggcccaaccctggccagaggccttaaccgctattgcc caggcattcaacatcccagaggagcatgaccactgcctggttcaaaaattcgagaagagc gctgcaatcaattaccacgcagatgatgaggctctcatactccctggctcacagatcacc accatcaatctggggcatgctgaactgcgcactcgcaggaactcagatggggaagtcctc ttccaggcgctcttcggagcttgctcctacatcatgccgcctggcttccaatccaacttc aagcacgctgtcgcttctctggaagacggcagaatctccatcaccttcaggaccagcgtg catcacaagactgaagatactctcccttggaaggcctgggtcccaatcctaaatgctgca ggcttcaaagcgctggatagacaggtgaaccccaatgacggctcactcatcttgccgatc ctggacatccagaaactgcccaaggtccaggctgcctgcccagggcttcaaggggtacta aaggccatccacagggagcccaccccattcacacctgatcccctaagggccaaggcattt ggctcagatgtcaagaacttgcgcattggagcgctactcaggcaccagtctactgaatgg ctggagaccttcgccaggaaaactgagatggagcctaggtcagttgggctctgcgttatt cacggcaccggcggcagtggaaaatcctacgctttgcaagacttccttcgcaacaatcct gaagagaggatcaccattattctgcccactaatgagctgcgattggactgggtgaggaag ctgccaaacgcccaccccagtaccctgaagacccatgagaagagtttgctggcccctgcg tctagcacagtcatcatggatgactacaccaagctgccagccggcttcatcgaggcctac atcaacaccaatcagggccttgagactctcatcctcacaggggaccccaaacaaagcttc caccatgagcccaatgataatgcaatgacagcaaaactcgcccccttctctgagattgcg aagaattactgtcgctactatctgaacgccacccaccgcaataagaaagacctggccaac atgcttggagtgtactctgaggtggaggggacaaccaacatcactatgtccagcagcata ctgcctggccgccatctgctggtcccatcaatgtacaagaagcaggcttacggcgaaatg gggcacaaagtctcaacttatgctggctgccagggcatcacagctcctgaaatccaaatt cttatcgacagtgacactccgatgtgctctcaacaggtgatgtacactgcgttgagtcgt gccgtgcacgccatccactttgtaaatactggcgtgaccaacgatgcgttctgggaaaag cttgctgccactccctatctcgctgccttcctccgcttggtccgagaggagaagacgaag gagcccactcccactgaagacaaggctactgagccagctggtcctgctacccacttccca gtcgaagatggcaagaatttctttgaccatatcactgataacatgcctgagaaacatgag agggaattgcactccaatcgtgatgggtttagcaattgcgtacagactgaggaccctgtg gtccaaatgttccctcaccagcaggccagagatgagacgctgttctgggccacaattgag gctcgcttgaagataaccgagcctgagaagaactttgaggaatttgtcagcaagcgccac atcggcgacgtgctttttgagaattataagctcgccatgggcctcccaaaagaacccatc gcttttgatgagaaactgtgggaggtctgtgcggacgaggtccagaagacctacctgtca aaacccctgcacatgctgaagaatggcgaaggtaggcagtctcctgacttcgaccccaag ctgatagccctcttcctcaagtcccagtgggtcaagaaagtggagaaactggggcagcct cgaatcaaagctggacaaacaattgcatcattccaacaggaggcagttatgctctatggc actatggccaggtacatgagaagggtaagagaggtcttccagcccaagaacatcatgatc aactgcgagaggactcctgaggaactctctgcgtgggccctggaaaattggaacttcaag cggaattcatatgcaaatgactacaccgctttcgatcagtcacaggatggggctatgctg cagtttgagattttgaaagcccgccaccactctatccctgaagtttatattgaaggctac ctggacctcaagtgcagctcaaagactttcctgggcatcctgaagattatgaggctcact ggtgagggacccacttttgatgcaaacaccgagtgcaacatcgctttcgcccataccaag ctgaagattccgatcggcactgcgcagctgtacgcaggggatgactgcgctttcgacttc gtccctgaagacaagccgagtttcaagaagattgaaactcaggtgtcactgaaagcaaaa ccggtaatcaaaaggcaaattcgcggtgagtgggcggagttttgcggcatgctcatcaca cctctcggtgtcatcaaagacccggtcaaaacttgggcttccttggagcttgcagcgagg agaggtgaattgatgaatcttagagacagctatgaaagagatgtagctctcgcctaccag cataaggaccggcttcacgagattttctcagaagagcaatccacagcccatcaattaacc gttcgaaagattgtcagagctaaaggtggaaaagtgtttgctagctacgactga

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