KEGG   Viruses: 20194353
Entry
20194353          CDS       T40000                                 
Symbol
ORF42, KW74_gp43
Name
(RefSeq) Equid alphaherpesvirus 3; major capsid protein
  KO
K26014  Herpesviridae major capsid protein
Virus
80341  Equid alphaherpesvirus 3
SSDB
Motif
Pfam: Herpes_MCP
Other DBs
NCBI-GeneID: 20194353
NCBI-ProteinID: YP_009054946
RS: NC_024771
UniProt: A0A077B607
LinkDB
Position
NC_024771:77440..81570
AA seq 1376 aa
MDRGNEPFRVPVPEVVPAGQILSTIEVSSHRTLFDFFRQIRSDDNGLYAAQFDVLLGTYC
NTLTLVRFLELGLSVACVCTKFPELSYVNDGTIQFEVQQPMIARDGPHPVDQPIHNYMMK
HIERRSLSAAFAIAAEALGLISGVSIDGTQISTSLRVRAIQQLARNVQTVLDSFERGTAD
QMLRVLLEKAPPLSLLAPLQLYREEGRLASRVNRAVLVSELKRRVVEDTFFLTKYERTRK
EMVLARVAELVNCTAPSVAVTRMTHSDTKGRAVDGVIVTTAGVRQRLLQGILTLEDMAAD
VPVTYGEMMISGTNLVTALVMGKAVRNLDDVARHLLGMQREQTRANERLVQDYEDVPSTA
RVRADLVLVGDRLVFLEALEKRVYQATNVPYPLVGNLDLTFVMPLGVFKPAVDRYSRHAG
SFTPSPGQPDPRTYPPKTIFFFNKDGDLVQLSFDSAAGTLCHSSFLDVDAILLALRREQH
ELQCAFGAYVTLPGAGGLLAQMRRFFERWHALMPARPRWTAEALMTVDQMLAPGNANLRL
ELHPAFDFFVAPGDVALPGPFNMPNVMPVVAAMPRVINGNIPLPLCPVEFRDGRGFELSV
DRHRLSPATVAAVRATFRDTNYPVVFYIIEAVIHGSERTFCALARLVIQCIVSYWRNSHN
VAFVNNFYMLMYINAYLGNGELPEECAAIYRDLLEHVQALRRLVMDYTVPGEALGGQGHD
ALNNVLVDPAFLPPLIWDCDPLIYRADLGRARAPNLWVDGVDYAAVPWVEMAEVNFKNTG
GHLVHNRPVRGENKKNPVVPHHDPEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRIYPLA
QSVVVPDLSPEDEAPTSPSDPRHPLNPRHLVPNTLNVLLHNARVAVDSDALLLLQEVVTN
MAERTTPILAAVAPDAGTATAVTQDMRTFDGTLHHGLLMMAYQRNDETLMEGAFFYPAPV
NALFACPDHLGALPGLNAEVLEAARDVPPVPHFFGGNYYATVRQPVVQHAAQSRADENTL
TYALLAGYFKLSPLALFHQFNTGFHPGFALTVVRQDRFLTENMLFAEKASESYFMGQLQV
NRHEAVGGVNFVLTQPRANVDLGVGFTAAYAAAALRAPVTDMGNLPQNLYLTRGSIPMLN
ADADAYLRRVVNAGNRLGPQGPVPIFGQLMPAAPAGVAHGQAAVCEFIVTPVSADLNYFR
RPCNPRGRSSGLVYACDGEMNAADVMYDHSQGDPAYPSRATVNPWASQRNSYGDRLYNGK
YNMSGASPVYSPCFKFFTPTEVETKGRNMSQLIAEAGASVAPSTANTEIQFKRPHGSADL
VEDPCGLFQEAYPPLSSTDTALLRTPHVGEIGADESHFAQYLIRDESPLKGCLLRA
NT seq 4131 nt   +upstreamnt  +downstreamnt
atggacaggggcaacgagccctttcgcgttcccgttccggaggtggttccggccgggcag
attttgtccactatagaggtgtcttcccaccgcacgctgttcgacttttttaggcaaatt
cgctcggacgacaatgggctgtacgcagcccagtttgacgtgctgctgggcacctactgc
aacacgctcacgctcgtccgctttctggagctcgggttgtcggttgcgtgcgtgtgcacc
aagttccctgagctcagctacgtgaacgacggcaccatccagtttgaggtgcagcagccg
atgatagcccgcgacgggccccacccggtcgaccagcccatccacaactacatgatgaag
cacatcgagcggcggtccctcagcgccgccttcgcgatcgcggccgaggcgctcgggcta
attagcggcgtcagcatcgacgggacccagatctccacatccctgcgggtgcgggccatc
cagcagctcgcccgcaacgtgcagacggtgctcgactcgtttgagcggggaaccgccgac
cagatgctgcgcgtgctgctggagaaagcgcccccgctgtcgctcttggcccccctgcag
ctctaccgcgaggagggccgcctcgcctcgcgcgtgaaccgcgccgtgctcgtgtccgag
cttaagcgccgggtcgttgaggacacgttcttcctgaccaagtacgagcgcacgcggaag
gaaatggtgcttgcccgcgtcgcggagctagtaaactgcacggccccgtcggtggccgtc
acgcgcatgacccactcggacaccaagggccgcgcggtggacggcgtgatcgttaccact
gccggcgtgcggcagcgcctcctacagggcattctcaccctggaggacatggccgctgac
gtgcccgtcacgtacggcgagatgatgatcagcgggaccaacctggtgacagcgttggtt
atgggcaaggccgtccggaacctcgacgacgtggcccgccacttgctgggcatgcagcgg
gagcagaccagggccaacgagcggctggttcaggactacgaagacgtgcccagcaccgcg
cgcgtgcgggccgacctcgtgctagttggggacaggctggtgtttcttgaggcgctggag
aagcgcgtgtaccaggccaccaacgttccctaccccctggtcggcaacctggatttgacc
ttcgtcatgcccctgggggttttcaagccggccgtggaccgctactcgcgccacgcaggc
agctttaccccgagtcccggccagccggacccgcgcacctacccccccaagaccatcttc
ttttttaacaaagacggggacctcgtgcagctctcgtttgacagcgccgcgggcaccctc
tgccacagctcctttctggacgtggacgccatcctgctggcactgcgccgcgagcagcac
gagctccagtgcgccttcggggcttacgtgacccttcccggcgcgggcgggctgctggcg
cagatgcgccgcttttttgagcgctggcacgcgctgatgcccgcacggccgcgctggacc
gccgaggcgctcatgaccgtggaccaaatgctggccccgggcaacgccaacctgcgcctc
gagctgcacccggcctttgactttttcgtcgctcccggagacgtggccctcccggggccc
tttaacatgcccaacgtgatgcccgtcgtggcggccatgccgcgcgtaatcaacggcaac
atcccactgcccctctgcccggtggagtttcgcgacgggcgcggctttgagctcagcgtg
gaccggcaccgcctgagccccgccacggtggccgccgtccgcgccacctttcgggacacc
aactaccccgtggtgttttacattatcgaggctgtcatccacggcagcgagcgcactttc
tgcgccctggccaggctcgtcatccagtgcatcgtgagctactggcgcaacagccacaac
gtggccttcgtgaacaacttttacatgctgatgtacatcaacgcctacctggggaacggc
gagcttcccgaagagtgcgccgcgatctaccgggacctcctggagcacgtccaggctctt
cggcgcctagtaatggactacacggtcccgggggaggctctcggcggccagggtcacgac
gcgctcaacaacgtcctggtagaccccgccttcctcccgcccctcatttgggactgcgac
cccctcatctaccgggccgacctggggcgcgcccgggccccaaacctttgggtggacggc
gtcgactacgcggccgtgccgtgggtggagatggccgaggtcaacttcaagaacaccggg
gggcacctggtgcacaaccggccggtgcggggagagaacaaaaaaaaccccgtcgttccc
caccacgacccggagtggtcagtgctctctaagatctactactacgccgtggttcccgcc
ttctccaggggcaactgctgcaccatgggcgtgcgctacgaccgcatataccccctcgcg
cagtctgttgtggtgccggacctaagccccgaggacgaggctcccacgagcccgagcgac
ccgcgccacccgctcaacccgcggcacctcgtcccgaacacgctcaacgttctgctgcac
aacgcccgcgtggccgtggactcggacgcgctcctgctgctccaggaggtggtcaccaac
atggcagagcgaacgacgcccatcctggcggccgtggcccccgacgccggaacagccacg
gccgtgacccaggacatgcgcacctttgacggcacgctccaccacggcctcctcatgatg
gcgtaccagaggaacgacgaaacgctgatggagggcgccttcttttacccggccccggtg
aacgcgctgtttgcttgcccagatcacctcggggcgctgcccggcctaaacgccgaggtg
ctcgaggccgcgcgcgacgtgccccccgtgccccactttttcggcggcaactactacgcc
accgtccgacagcccgtggtccagcacgcggctcagagccgcgcggacgaaaacacgctg
acgtacgccctcctggcgggctacttcaagctgagccccctcgcgcttttccaccagttc
aacacggggtttcacccagggttcgccctgactgtggtgcgccaggaccggtttttgacg
gaaaacatgctcttcgctgagaaggcttcggagtcgtactttatggggcagctgcaggtg
aaccgccacgaggccgttgggggtgttaactttgtccttacccagccccgcgccaacgta
gacctcggcgtgggcttcacggccgcgtacgcggccgcggcgctgcgcgccccggtgacg
gacatgggcaacctcccccagaacctgtacctgacgcgcgggagtatcccgatgctaaac
gccgacgcggacgcctacctgcggcgcgttgttaacgccggcaaccggctcgggccccag
ggcccggtccccattttcgggcagctgatgccagccgccccggccggggttgcacacggg
caggcggccgtgtgcgagtttatcgttacgccggtctcggcggacctgaactacttcagg
cgcccctgcaacccccgggggcgcagctcgggtctggtgtacgcgtgcgacggtgagatg
aacgccgcggacgtcatgtacgaccactcgcagggggacccagcctacccaagccgcgca
acggtgaacccctgggcgtcgcagcgcaactcgtacggggaccgcctctacaacggcaag
tacaacatgagcggtgcctcgccggtgtacagcccctgcttcaagtttttcacccccacg
gaggtggagacgaaggggcgcaacatgtcgcaactgatcgccgaggccggcgcctccgtg
gcgcccagcacggccaacaccgagattcagtttaagcgcccgcacgggtccgcggacctt
gtggaggacccctgcggtttgttccaggaggcttacccgcccctcagctcgaccgacacg
gcgctgcttcggaccccacacgtgggcgaaattggcgccgacgagagccactttgcgcag
tacctaattcgcgacgaatcgccgctaaaaggatgtctgctccgggcataa

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