Viruses: 20531195
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Entry
20531195 CDS
T40000
Symbol
SvXgp1
Name
(RefSeq) Asparagus virus 3; RNA polymerase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
445435
Asparagus virus 3
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
20531195
NCBI-ProteinID:
NP_570726
RS:
NC_003400
UniProt:
Q8QXK9
LinkDB
All DBs
Position
NC_003400:82..4977
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AA seq
1631 aa
AA seq
DB search
MARVRASLEKIRDPSVQTAISEAAYAHVRPVLKEALVNCPYALNDAEADCLENFGITVNP
YATQTHTHAACKAIENRMLEIVGKHLPKERCTMLFLKRSKLRYLRRAAALKDDFINQDIE
PKDLFRYDRDTIRTRLKDITTPIAYMSDTLHFMSHTELMLLFADSPPLQTMLATLVLPIE
AMHRRTTLYPALYSINYGPKGFEYIPGNHGGGAYFHPYDTLDWLKVRQLRGEDHHGIDPT
ITLTFQLVESLGANHLFIIQRGDLRTPLVRTFCRDTLVTMPKIFCPDSMNANRPLTKTKA
MQMLMYCKSVKQVSERDIYAKFRQMISTPELELYEPDEMVHLCNYFHFVAHLDSITCYDD
LLGNSLWATPHHPRTHQSHPILDFFRGQNNFSKLLAALKWEPFSYSLEPNDFTVSYDGHS
ARALADRTGLSLTVAAATIKDSRADPTLFTEADLEDTPFEDFLGRLTYPIPTNQEGSPRD
TEPESPSISGATQVFHFNTSAQALTSSPESPQAQEWPEVHHSSWLAATFHHMLGELPFAQ
TVGRRTYLFASPPVLFSDPDLTHHTNLAWQPILSDVVDSLGISATACFIQVYDEGLNQPW
RCNYGRKPESDVISTLTLGQAELELAGGKRLSLKEGDWFTINGPLLQRGHHISVGSPQCI
TLTFWLHMSPVASASPLQNWLSVQPTSPAESSRGKCAPNLAHQPSNPVDTHYVPSRNRAQ
SLTTDNTPLIHKAVSTRTPLTPIPDDVATANSTCAIPWVSWVPLLQSHGFDGTQLQHDPA
GSLIIPVQDIRRLAHANYPEEVPASLQDTLNAIKRFPVTIKIDHQRASSYASDIKNCRTG
KLLTQMDLKWKSSFAYKMQHEDKQVAGTVIHGCGGSGKSHAIQKWMRTLPADQSTVTVIT
PTVILRNDWGTKLPILPSETFKTFEKGIIQPCNPVVIFDDYTKLPPGSIEATVMHHSNIS
YIVLTGDSRQSVYHELNAEAYIATLPEAVDVFTPFCEFYLNATHRNVQALANKLGVYSER
QGRLKVNFASHHLKASRTPLLVPSTMKRNAMADMGHHGMTYAGCQGLTAPKIQILLDNHT
QFCSDRVLYTCLSRAVDSIHFINTGPTTGDYWTKLESTPYLKAFIDTYRDEKTELYNAEP
ASDAPVEPEAPCTHFPPAPKPLLEPLVSELSAKEDREIFSKSAGYSDTIQTEDPEVQLFQ
HQQAKDETLYWATIDARLSLATPEDNLLEFNMKRDVGDILFMNYAKVMNLPAEPVQFEER
LWEISAAEVRNVYLSKPIGNLVNAASRQSPDFPKHKIALFLKSQWVKKVEKLGALKVKPG
QTIASFMQETVMLYGTMARYLRKMRQRFQPPNIFINCERTPDDLDVFVKTHWNFSRPAHT
NDFTAFDQSQDGAMLQFEVMKAKFFNVPSEIIEGYIYIKLNAAIFLGTLGIMRLSGEGPT
FDANTECSIAYNATRFHIDSGTAQVYAGDDMALDRICPEKSSFHRLENQLKLTSKPMFPR
QTTGDYAEFCGWVFTPAGIIKHSLKMYASIQLQKKLNNIKESARSYALDLRYAYKLGDNL
QEHLTEEEAAYHQQSVRDMHLLHQAEVLAHGSSSPPHSFSTAEPNRTKTQKRNATKRKSK
VRIAEILPPDY
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atggccagagtacgagcgtcgttggagaagatccgggacccatctgtacaaacagctatc
tctgaagctgcttacgcacatgtacgccctgttctaaaagaagccctcgttaattgcccc
tatgctctcaatgatgccgaagcggactgccttgaaaacttcggtattactgtaaatccg
tacgccacccaaactcacacacacgccgcttgtaaagcgatagagaataggatgttagaa
atagtaggtaaacatctcccaaaagaacgctgcacaatgcttttcctgaaacgcagcaag
ctaagataccttagacgtgccgcagccttgaaagatgacttcatcaaccaggacattgaa
cctaaggacctttttcgttacgatcgggatactatacgaacccgccttaaggatattact
accccaatagcctatatgtccgacaccctacacttcatgtcccacacggagttgatgttg
cttttcgctgattctccgccactccagaccatgttggccactttagtcttgccgatcgag
gctatgcatcgccgcaccacgctataccccgccctctacagcatcaactacgggcccaaa
ggatttgagtacataccaggtaatcatgggggaggtgcctacttccacccctacgacacc
ctagactggcttaaagtgcgccaactccggggggaagaccatcacggaattgaccccact
attacactcactttccagctggtggaaagcctgggcgctaaccatctctttatcatccaa
cgaggcgacctccggactccgctggtacgcacattctgtagagacacactggtcaccatg
cccaaaatcttttgccccgactccatgaatgccaaccgtcccctcaccaagacaaaagcc
atgcagatgctgatgtattgcaaatctgtcaagcaagtaagtgaacgggacatctacgca
aagttccgacaaatgatctccacccctgaactggagctttacgagcccgacgagatggtg
cacctctgtaactactttcacttcgtagctcatttggactcaatcacttgctacgacgac
ctcctaggcaattctttatgggcgacgcctcaccatccccgtacgcaccaaagtcaccca
attttagacttcttccgtggacagaacaatttcagtaagctgctggctgcacttaaatgg
gaacccttttcctattccctggagcctaacgacttcaccgtgtcatacgacggccattcc
gctcgcgcccttgccgacaggactggactgtctctcaccgtcgctgccgcaaccatcaaa
gacagtcgggccgaccccacactcttcaccgaggctgacctagaagatactccttttgag
gactttctaggccgtctaacttaccccattccaaccaaccaggaggggtcaccgcgtgac
acggagccagaaagcccatctattagcggcgccacacaagtcttccatttcaacacctca
gcgcaggctttaaccagctccccagagtccccccaggcacaagagtggcctgaagttcac
cacagcagctggttggccgctactttccatcacatgctcggtgaattgccattcgcacaa
actgtaggcagacgcacctacctcttcgcctcaccgcccgtgctcttctctgacccagac
ctcacccaccacaccaatttagcctggcaacccattctctccgatgtggttgattccttg
ggcattagcgccaccgcctgcttcatacaggtgtacgacgaaggcctcaaccaaccatgg
cgctgcaactacggaagaaaacccgagtccgatgtcatctcgaccttaactttaggccag
gccgagctcgagttagctggtgggaaacgcctcagcttgaaagaaggtgactggttcacc
atcaacggccctttactccagcggggtcaccatatctcagtgggctcgccacaatgcatc
acactcactttctggctgcacatgagccccgtggcaagcgcatcaccactccagaactgg
ctttccgtccaacccacctcgccggcagaaagctcacggggaaagtgtgctcccaacttg
gcacaccagccctccaatcctgttgacacccactatgtcccgagccgcaaccgagctcaa
agtcttacaaccgacaacacgccgctcatacacaaggctgtcagcactcgcaccccactc
acgccaatcccagacgacgtggccactgctaattccacgtgtgccataccatgggtcagt
tgggtgcccctcctccagagccacggtttcgatggcacacaactccagcacgaccccgcc
ggcagtttaatcatccccgtccaagacattcggcggcttgcccatgctaattaccccgaa
gaggtgcccgctagcttgcaggacactttgaatgccatcaagcgcttccccgtgacgatt
aaaattgaccaccaacgagccagctcatacgcctccgacatcaaaaattgtagaactggc
aagttgcttacccagatggacctcaaatggaagtcttccttcgcttacaagatgcagcac
gaggataagcaggtagccggcactgtcattcatgggtgcggcggctctggcaaatctcac
gccatccaaaagtggatgcgcactctccccgcggatcagagcacggtcacggtcatcacc
cccacagtcatcctccggaacgactggggcaccaaactgcccatcttgcccagcgaaacc
tttaaaacctttgagaagggcatcatccagccttgcaacccagttgtgatcttcgacgac
tataccaaactgccccccggatccatagaagccacggtcatgcaccatagcaacatatcc
tacatagtgctcactggagacagccggcagtctgtgtaccacgaactcaacgccgaagct
tacatcgccacgctgcctgaagctgtcgatgtcttcaccccgttttgcgaattctacctc
aatgccacccaccgcaacgtccaagctttggccaacaagctgggggtttattcagagcgc
caaggtagacttaaagtcaatttcgcctcccaccacctcaaggcctccaggacgcctctg
ctagtgccctccaccatgaagcggaatgccatggcggacatgggccaccacggtatgaca
tatgccggatgccaaggactcacggccccaaaaatccaaattcttctggacaatcacact
caattctgctccgaccgggtgctctatacctgcctctctcgcgcggttgactccatccac
ttcataaacactgggcccaccacgggggactattggaccaagcttgagagcactccatac
ttgaaagctttcattgacacctacagggacgagaagacggagctttacaatgccgaacca
gcatctgacgcccccgtcgaacccgaagccccttgcacccacttcccaccagcgcccaaa
ccgttactcgagcccctcgtttccgagttatctgccaaagaggatagggagatcttctct
aagtccgccggctactccgacaccatccagacggaagaccccgaggtccaattatttcag
caccaacaagccaaagacgagactttatattgggccaccatcgacgctcggctttcactt
gccacccccgaggataatctactcgaatttaacatgaagagagatgtgggcgacatcctc
tttatgaactacgctaaagtcatgaacctccccgctgaacctgtccaattcgaggagcga
ttgtgggaaatctccgctgctgaggtgcgcaatgtctaccttagcaaacccatcggcaat
cttgtcaatgctgcctcccgtcagtctcccgactttccaaagcataaaatagccctcttt
ctgaaatctcagtgggttaagaaagtagaaaagctgggtgcacttaaagtcaagccaggg
caaaccatagcttctttcatgcaggaaaccgttatgttgtatggcacgatggcccgatac
ttgcgtaagatgcgtcagcgcttccagccaccgaacattttcatcaactgcgagcggacg
ccagacgacctagacgtctttgtcaagacccattggaacttctcccgccccgcccacacc
aatgacttcaccgcgttcgaccaatctcaagacggcgccatgctacagtttgaagttatg
aaagctaagttctttaacgtgccctccgaaatcatcgaaggctacatttacatcaaactg
aacgctgccattttcctaggcactcttggcataatgcgactttccggagaggggcctact
tttgatgccaatactgaatgctcaatcgcctacaacgccactcgcttccacattgacagt
ggaactgcccaggtttacgccggcgacgacatggccctcgaccgcatctgcccggagaaa
tctagcttccacagactggaaaaccagctcaaacttacttccaagcctatgtttccgcgg
caaacaaccggtgattacgcagaattctgtggctgggtgttcactcccgccgggattatc
aaacattcactcaagatgtacgcctctatccagcttcagaagaaattgaataatattaag
gaaagtgctcgctcttatgcgctggacctccggtatgcctacaaattgggcgataatctc
caggagcatctaaccgaggaggaagccgcgtaccatcaacaatccgtgcgggacatgcat
ttgctgcaccaggccgaagttctcgcacatggctcgtctagtccgccgcactcattttca
acggccgagcctaaccgtacaaagacccaaaagcgtaatgccaccaagcggaaatccaaa
gtgcgaattgccgaaattctacccccggactactaa
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