Viruses: 20712486
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Entry
20712486 CDS
T40000
Symbol
RdRp, NI66_gp1
Name
(RefSeq) Yam virus X; RNA dependent RNA polymerase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
1503864
Yam virus X
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
AAA_16
NB-ARC
AAA_14
ResIII
Motif
Other DBs
NCBI-GeneID:
20712486
NCBI-ProteinID:
YP_009091814
RS:
NC_025252
UniProt:
A0A096XMB6
LinkDB
All DBs
Position
NC_025252:79..4239
Genome browser
AA seq
1386 aa
AA seq
DB search
MANVRAALERFTDPSIKSALQEQCFTEVRSTLRSVSNLNPYSHDVSTSDSLEKLGIATNP
FSIATHTHGAAKAVENRMLNILGAQLPKTPCTFLWIKKAKKNLLMRSSTHDTFLNMPIEP
KDFARYEEETIVSKLSGITDKTVVISDALHFLKPSFLWALFKGNPTVTDVYATMVLPAEA
LHKHPSMNPDIYNINYDFNGFQYIPGAHAGGAYHHEFSSLDWLKYGHIHYDNGKTKEYIT
CQLIESLGANHLFLFRRGFFLTPRVRTFSLDEYVILPQIFHPKQMNASRPIKFTLANQLL
LYVKSIKSPTQRDIFAKLRQLIKTSELNRYAPDELIHISNFFLFISELSAESCYDNLLTM
GFFKRCTVPVKNAFLELYRKLFGKLEFEQLIAALDWKTFSYSLEVIDKKIIRYSYLEEVR
KEGYTTFNTNFNGLWDIIEKPEQTDSELTAEPKPHTELREKVEEIIEEKAQASIEMKVAG
NILTATERDWNKSQMEKIYKLVNDPLSFCQLSKEMVQCLSEMALVGCSQSPWKAWETILK
SLGFKANQIQLTPDNLLILPIENIRKVNKTASFPLNFPSRLAKLLTDCKFCLTKINLNSA
RASAYASDLKNSRTGALLRNQPFEWKTALAARCENTIRSDFTGMVIHGAGGCGKSRLFQN
FLKSSTKTDRLFTVVCPTVALLMDWRNKVPHLPLETFKTFEKAMLQPSNPFVIFDDYTRL
PEGFIEAFLIQHPNVEIAFLTGDPRQAEFHETNPEAYINQLSKACDVFSPYCSYYINATH
RNCRTLANALGVYSEVDTELKISHSSHVSDGIPVICPSHLKSEAIQELGRKSMTYAGCQG
LTAPKVQILLDTNTPLCSTKVMYTALSRAVDEIRFVNSGSNSTDFWNKLSCTPYLKTFIN
AVREPNKTNSEAPESVIREPLCKTHFPVENTTTILEKEVSQLVDKHEREIYNDQLGHSNA
IQTEDTIVQLFQHQQAKDETLYRATIDKRIKLSSEEANLRELVLKKDIGDILFMNYKKAM
NLPEDPIPFEQDLWTACEAEVQSTYLSKPVHMLMNGQLRQSPDFDPHAIQLFLKSQWVKK
VDCIGILKVKAGQTIASFMQETVMLFGTMARYMRRMRDRYQPRNILINCEKNPVQITDWI
MDGWRFDRPAYANDFTAFDQSQDGAMLQFEVIKAKFHSIPEEIIDAYIAIKLNSKIFLGT
LAIMRLTGEGPTFDANTECNIAFHFTKFQVAEDTRLMFAGDDMAQDAPAVMKSSFVELQD
KLALTSKPIVYSQAPGDFAQFCGNLITPLGLLKEPRKLNASLQLAKNLGNENNVAAAYAN
DLFYSYAQGDRLFDVLSEEEMTHHAAATRFLVKGFRHTFKAPDSDDEDDGTKDLVSRLEL
EGHNTF
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgttagagcagcactagaacgcttcactgacccatctattaaatcggctttg
caagagcagtgctttactgaagtccggagcactttgcgtagcgtctcaaacttaaatcca
tatagtcacgatgtatccacatctgactctctggagaaacttgggatagctacgaatccg
ttctcaatagccacacacactcatggcgctgccaaggctgttgagaatcgaatgctaaac
atactgggagcgcaattgccgaagaccccttgtaccttcctctggatcaagaaggcgaag
aaaaatttactgatgaggtcttcaactcacgacactttcctcaatatgcctattgaacca
aaggacttcgcccgttacgaagaggaaaccatcgtgagcaagttgtctggcataactgac
aaaacagtggtgatttccgacgccctacacttcttgaaaccatcttttttgtgggcactc
tttaaaggcaacccgaccgtaacagatgtgtatgccacaatggtgctaccagctgaagct
cttcacaagcacccatcaatgaacccagacatttacaatatcaactatgatttcaatggg
tttcagtacatacctggcgcacacgcaggtggtgcctaccaccacgaatttagttcactt
gactggttaaagtatggacacattcactatgacaatggaaagaccaaggaatacataaca
tgccaattaattgaatctttaggggccaaccacttattcctgtttaggcggggcttcttc
ttgactcctagagttagaactttctctctagatgagtatgttattcttccgcagatcttt
catcccaagcaaatgaatgcgtcaagaccaatcaaattcacattagcaaatcaactgctg
ttgtacgtgaaaagcatcaagtctcccacgcaaagggacatttttgcgaaattgaggcaa
ttgattaaaacaagtgaactcaacagatatgccccagacgaactgatccatatctctaac
tttttcctttttatctctgaattgtcagctgaatcttgctatgacaatttattaactatg
ggtttcttcaagagatgcacagtaccagttaaaaatgcatttcttgagctgtacagaaaa
ctgtttggcaaactagaatttgaacaactcatagcagcgctggactggaaaactttctct
tactctcttgaggtaattgacaagaagattatacgctactcataccttgaggaagtaagg
aaagagggttacacgaccttcaacaccaatttcaatggcttatgggatatcattgaaaaa
cctgagcagactgactcagaattaactgctgaacctaagccacacacagagctgcgtgag
aaagtggaggaaataatagaagagaaagcccaagcaagtattgaaatgaaagttgctgga
aatatcttaactgccacagagagagactggaacaagagtcaaatggagaaaatatacaag
ttagtcaacgaccctctctctttctgccagttaagcaaagaaatggttcaatgcttgagt
gaaatggcattagttggctgctcccaatccccttggaaagcttgggagaccattctcaag
agcttaggctttaaagcaaatcaaattcagttaacccctgataatcttttaattttacca
attgagaatatcaggaaagttaacaaaactgcatcttttcctctcaattttccctctaga
ttagccaaactcctaactgattgtaaattctgtctaactaaaattaacttaaattctgct
agagcctcagcctatgcatctgatttgaagaactcacgcaccggagctcttcttcgcaac
cagccgtttgaatggaagactgcacttgcggctcgttgtgagaacactatcagaagcgat
tttacagggatggtcatccacggtgcgggtggttgtgggaaatctagacttttccaaaac
tttctcaagtcatcaacaaaaacagacagactcttcactgttgtctgcccaacggtcgcc
ttattgatggactggagaaacaaagtcccgcatttgcctttagaaactttcaaaacgttt
gaaaaggctatgctacaaccatcaaacccttttgttatattcgacgattacacaagatta
ccggaagggtttatagaagctttcttgatacaacacccaaacgtcgagattgctttcctg
acaggagaccccagacaagctgagtttcacgaaacaaacccagaggcttacataaatcag
ctgtcaaaagcatgtgatgtcttttcaccatattgctcatactacattaacgctactcac
cggaactgcaggactttggcgaatgctttaggcgtgtattctgaggtggacacagagttg
aaaatctcacattcatctcatgtttctgacggaatcccggtaatctgcccatcgcacctt
aaaagtgaagcaattcaagagttgggtaggaaaagcatgacttacgcgggatgtcaggga
cttacggcgcccaaagtacaaatcttgctggataccaacacgccactctgcagcacaaaa
gtgatgtatacagcgttatctagagcagttgatgaaatccggttcgtgaactcgggatct
aacagcactgatttctggaataagctttcatgcacaccttacttgaaaacctttatcaat
gctgttagagaaccaaacaagacaaactcagaagctccggagtcagtgatcagggaacca
ttgtgcaagactcactttcctgtggaaaacacaacgactatattggagaaagaggtgagt
caacttgttgataagcacgagagagaaatctataacgatcaactgggccactctaacgct
atacaaacggaggataccatagtccagttgtttcagcatcaacaagccaaggacgagacc
ctctatcgagcaaccattgacaaaagaatcaaattaagctctgaagaagccaatctcagg
gagctcgttctgaagaaagacattggggatatattgttcatgaattacaagaaagctatg
aatttaccagaagaccccatcccttttgagcaagatctttggactgcctgcgaggctgag
gtgcagtccacttatttatctaaacctgtccatatgttaatgaatggccaactccgacag
tccccagattttgatccacatgccatacaactatttctcaaatctcagtgggtcaagaaa
gttgattgcattgggatccttaaagtcaaggcgggacaaacaatagcatcttttatgcaa
gaaactgtgatgctgtttggtactatggcgcgctacatgaggcggatgcgagacagatac
caaccacgaaacatcttgattaactgtgagaagaaccccgttcaaatcactgactggatt
atggacggctggagattcgaccgccccgcctacgccaatgatttcacagcctttgatcag
tcacaagatggagccatgcttcaatttgaagtgatcaaagcaaagtttcactcaatacca
gaagaaatcattgacgcatacatcgcaatcaaactgaacagcaaaattttcctggggact
ctagcaatcatgagactgactggtgaagggccaacgtttgacgcgaacacagaatgcaac
atagctttccatttcactaaattccaggttgcagaggatacgagattaatgttcgctggt
gatgacatggctcaagatgcaccagcagtaatgaaatcatcttttgtggagctacaagac
aaacttgcactcacttccaaaccaattgtctactctcaagctcctggtgactttgctcaa
ttttgtggaaacctaataaccccacttgggttacttaaagaaccccgaaagctaaatgcc
tcactacaattagcaaaaaatttaggcaatgaaaacaatgttgcagcagcttacgccaat
gatcttttctacagctacgcacaaggagatcgcctcttcgacgtgctcagtgaagaggag
atgacacatcacgctgccgccacaaggtttcttgttaaaggtttcagacacactttcaaa
gcaccagattccgacgacgaagatgatggcacaaaagatctagtctccaggctggagctg
gagggccataatactttctag
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