Viruses: 20964384
Help
Entry
20964384 CDS
T40000
Symbol
NZ81_gp1
Name
(RefSeq) Vesicular stomatitis Alagoas virus; L polymerase protein
KO
K26275
Rhabdoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.6.1.-
2.7.7.88
2.1.1.375
]
Virus
198833
Vesicular stomatitis Alagoas virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Methyltrans_Mon_2nd
Methyltrans_Mon_1st
Mononeg_mRNAcap
Methyltrans_Mon_3rd
FtsJ
Motif
Other DBs
NCBI-GeneID:
20964384
NCBI-ProteinID:
YP_009094101
RS:
NC_025353
UniProt:
B3FRL5
LinkDB
All DBs
Position
NC_025353:4671..10997
Genome browser
AA seq
2108 aa
AA seq
DB search
MDVHDFELEDNIELTEEDYASREFLSNEEQMTYLNHADYNLNSPLISDDIDYLIKRYNAE
QVPGMWSSKSWDCVLEMMRSCQAHPISSSSMHKWMGGWIMSENHDASQGFGFLNEVDRES
ELTFEVVETFIRGWSGKEVAHKRKDKCSETYRIVSFLCQKFLDLHKLTLILNAVSLDELD
HLLKNFKGKKRLSTLGSPIARLRVPSLGPVFLVKGWLYVKKLEMIWDRNFLLMIKDVIIG
RMQTLLSMIEREDDMFHEEDILSLLRIYRIGDSILVKQGNQSYDLIKTVEPICNLKLMKL
ARVFRPMIPDFPHFERHIRTTVRNLANIDSAITFLFDEIMNIKTVDLTLVVYGSFRHWGH
PFIDYYEGLKKLHHQVTMPKTIDKGYAAALASDLARIVLQQQFSENKKWFVDKSAIPKKH
PFYNHITENTWPTAAQIQDFGDHWHELPLTKCFEIPDLIDPSIIYSDKSHSMNRSDVLRH
VRNSPNTPIPSRKVLQTMLETKATNWGEFLSSIDKYGLELEDLVIGLKGKERELKLAGRF
FSLMSWKLREYFVITEYLIKTHFVPMFKGLTMADDLTAVIKKMMDTSSGQGLDNYDSICI
ANHIDYEKWNNHQRKESNGPVFRVMGQFLGYPNLIERTHEFFEKSLIYYNGRPDLMRVNG
NTLENRTPLNVCWQGQAGGLEGLRQKGWSILNLLVIQREAKIRNTAVKVLAQGDNQVICT
QYKTKKARNDAELLGALQQMVSNNESIMLAIKQGTEKLGLLINDDETMQSADYLNYGKIP
IFRGVIRGLETKRWSRVTCVTNDQIPTCANIMSSVSTNALTVAHFAKDPINAMVQYNYFG
TFARLLLMMHDPAIRRSLYEVQLTIPGLHSLTFKYAMLYLDPSIGGVSGMSLSRFLIRAF
PDPVSESLAFWRFIYCHSKSELLKEISSVFGNPDIAKFRLSHVDKLMEDPTSLNIAMGMS
PANLLKTEVKKCLLESRQDIKNQIIKDATIYLHHEEEKLRSFLWSINPLFPRFLSEFKSG
TFLGVADGLISLFQNSRTIRNSFRRKYHKELDDLIIKSEVSSLMHLGKMHLKRGSCKMWG
CSSQHADSLRYKSWGRTVIGTTIPHPLEMLGSYHKKEAPCLECNTSGFTYVSVHCPRGIT
SVFQSRGPLPAYLGSRTSESTSILQPWEKESKVPIIRRATRLRDAISWFVDPDSNLSQTI
LKNITALTGEEWSKKQIGFKRTGSALHRFSTSRMSHGGFAAQSTAALTRMMATTDTMRDL
GDQNYDFLFQATLLYAQMTTTVARNNVAFSCTDHYHITCKSCLRTISEITLDTPMVYDPP
DVSHVLKSWRNGEGSWGQEVKQLYPREGIWSDLSPAEQSYQVGRCIGFLFGDLTYRKSTH
ADDSSLFPLSIQNRIRGRGFLKGLLDGLMRASCCQVIHRRSLAQLKRPANAVYGGVIFLI
ERISASAPFLSLTRTGPIRLELETVPHKIPTSYPTSNRDMGVIVRNYFKYQCRLIEKGQY
KSHYPQIWLFSDVLSIDFMGPLSISSSLLSLLYKPSLSSKDKNELRELANLSSYLRSGEG
WDDVHIKFFSKDTLLCSEEIRHACKFGIYKEVFSTSSYPTWGSEAFGAISSQPVFYSTRE
SRKCLDTPPRVQNPLLSGLRLGQLPTGAHYKLRSILRQLHVNYRDFLSCGDGSGGMTASL
LRENRHSRGIFNSLLDLSGTVMRGASPEPPSALETLGSERVRCINGSTCWEHPSDLSDPR
TWKYFSKLKRDVGLTIDLITMDMEVRDPSITKLIEMNLKSHLYELLEQEGTLIYKTYGTY
ITEFDDNILTMIGPFFQQVDLVQTEFSSSQTSEIYFVGRRLKRHVDAPWVDWSFLHDTWR
TQYAFRSSVQEFVRASKFLKKDTLSGIPSQFIPDPFVNLETMLQIFGVPTGVSHLIALKA
SDHPTELVTLAIFYMITVSYYNINHIRIYPEKPNPPSDGMAQNVGGAIVGLSLWVSLMEK
DVQLYERSLKSIHTSFPIRWMSVPVPNGYQQIWDTYGRGVSKDCRLSDSLAAIGNWIRAM
ELVRNKTSQSAFDQHLMNSLLKLIDHHLSWRELKKTGIKHWLVGRIASLDKSIITIKSDI
MDENSWRD
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcatgattttgaattggaagataacatagaattgaccgaggaagactatgcc
tcaagagagttcttatccaatgaagaacagatgacatatttaaatcatgctgattataat
ttgaactcaccattaatcagtgatgatattgattatttgataaagcgatacaatgcagaa
caagtaccaggaatgtggagttcaaagtcatgggattgtgtgttggaaatgatgaggtca
tgtcaagctcaccccatatcatcatcttcaatgcacaagtggatgggaggatggattatg
tctgagaatcatgatgcaagtcaagggtttggattcctaaatgaagtggacagagaatca
gaattgacatttgaagtggtagagactttcatacggggttggtcagggaaggaggtggca
cacaaaagaaaagataaatgttcagagacctaccggattgtgtctttcttgtgtcagaag
ttcctcgatcttcataaacttactctgattttaaatgctgtatccctggatgaattggat
caccttttaaagaattttaaaggaaagaagcgtttatctacattaggatctcccatagcg
cgattgcgagttcctagcttaggaccagtgttcttggtcaaggggtggttgtatgttaag
aaattagagatgatctgggatcgcaacttcctacttatgattaaggatgtgattattgga
cgaatgcagacattgttgtctatgattgagagggaagatgacatgtttcatgaagaagat
attctgtcattactccggatctacagaatcggagattcgatcttggtgaaacaaggaaac
caatcttatgatttgatcaagacagttgagccaatttgcaatctcaagctgatgaaattg
gcacgagtgttcagaccgatgatcccggattttccacactttgaacgtcacattcgtaca
acagtgagaaatttggcgaacatagattcggccataactttcctatttgatgagataatg
aatataaagacggtagatctaactctagttgtttacgggtctttcaggcattggggccat
cccttcatcgattattatgaaggtttgaagaagttacatcatcaagtaactatgcctaag
actatcgacaaaggctatgcggcggcgttagcaagtgatctggcacggattgttttgcag
caacaattcagtgaaaacaaaaaatggtttgtggataaatccgcaattcctaagaaacat
cctttttataaccacatcacagaaaacacttggcctacagcagcccaaatacaagacttt
ggagatcactggcatgaattacctttgacgaagtgttttgaaatccctgatcttattgat
ccatcaatcatatattcagacaagagtcattccatgaatagatctgatgtcttgaggcat
gttcgcaattctccaaacactcccattccaagcagaaaggtgttgcagacaatgcttgaa
acaaaggcaacaaattggggagaatttttgtcatcaatagacaaatatggcttagaactg
gaagatttggtcatcgggctgaaagggaaagaacgagaattaaaattggccggcagattt
ttttctcttatgtcctggaagttgagagaatatttcgtcattacggagtatttaataaag
acacattttgtccccatgtttaagggattgacaatggcagatgatctaacagctgtcata
aagaaaatgatggatacctcatcaggacagggtttggataattacgactcaatttgcata
gccaatcacattgattatgagaagtggaacaatcaccagcggaaagaatccaatggtcct
gtttttagggtaatgggacaattccttggctaccccaatttgattgaacgcacccatgaa
ttctttgaaaaaagtctgatttactataatggacgtccagacctgatgcgagtaaacgga
aacaccttagaaaacagaacacctctcaacgtttgttggcaaggtcaagctggaggctta
gaggggcttagacaaaaaggatggagcatcctgaatcttcttgtgattcaaagagaagca
aagattcgaaatacagcggtcaaggtgctagctcagggagacaatcaggtcatttgcacg
caatataaaacaaaaaaggcccgaaatgacgcagaacttctgggagctctacaacaaatg
gtaagtaataatgaaagtataatgcttgccatcaagcaaggaactgaaaaattaggttta
ctgataaatgatgatgagacaatgcagtccgctgattacctcaactacgggaaaattcca
atattccgtggtgttatacgagggttagagacaaaaagatggtctcgagtcacatgtgtt
acgaacgatcaaatcccaacttgtgccaacatcatgagttcagtttccactaatgcatta
acagtcgcacactttgccaaagatcccattaacgctatggtccaatacaattactttggg
acattcgctcgcttgttgctgatgatgcatgatccagctatcagaagatcactctacgaa
gtccagctgaccatccccggtctacacagtctgacattcaaatatgccatgttatatcta
gatccttcaataggaggagtttctggcatgtcactatcccgcttcttgattagggcattt
ccagacccagtatcagaaagtctggcattttggagatttatttattgtcattctaaatcg
gagttgttaaaggagatcagttctgttttcggaaatccagacattgcgaaattccgattg
tcacacgtggataaattaatggaggatccgacgtcattaaatatcgcaatgggaatgagt
cctgctaatttactaaaaacagaggtaaaaaagtgccttttggagtcccgtcaagacata
aaaaatcaaatcataaaggatgccacgatataccttcatcatgaagaggaaaagttgagg
agctttttgtggtccatcaacccattgttcccgcgattcttaagtgagttcaaatcagga
acttttctgggagtcgcagatggattgatcagcctattccaaaattccaggacaattagg
aattcgtttcgacgcaaatatcataaagaattagacgatttgataattaagagcgaagta
tcatcacttatgcatttaggaaaaatgcacttgaaaagaggatcatgtaaaatgtgggga
tgctcctcacaacatgctgactccttgcgatataagtcatggggcagaacggtcatcgga
actacaattcctcatcccctggaaatgctgggctcctatcacaaaaaggaagctccttgc
ctagagtgtaatacctcaggattcacttatgtttcagtccactgtcctagaggcataaca
tcagtgtttcaatccagaggtcctttgcctgcatatctaggctctaggacatcagaatct
acgtccattttgcagccatgggagaaagagagtaaagttccgatcatcagacgtgctacc
aggttgagagacgccatatcgtggttcgtagatccagattctaatctttctcagactata
ttgaagaatataacagcattgactggggaagagtggtccaaaaaacaaattggtttcaaa
aggaccgggtctgctctccacaggttctcaacgtcacgcatgagtcatggaggatttgct
gctcaaagtactgctgctctcaccaggatgatggccactacggatacaatgcgtgatttg
ggagaccaaaattatgactttttgttccaggccactctgctgtatgcgcagatgacaaca
acagttgctaggaacaatgtggccttcagctgcacagatcattaccacatcacatgcaaa
tcttgtctgcgaacaatatccgaaatcacacttgataccccgatggtatatgatccacca
gacgtatcccatgtgctaaaatcttggaggaatggggaaggctcatggggacaggaggtc
aaacaactttatcccagagaaggcatttggagtgacttatcaccagctgaacaatcttat
caagtagggcgatgcattggatttctattcggggatttgacatatagaaaatctacacat
gctgatgatagttctttattccctctgtcgatccaaaatcgcattcgtggtagagggttt
ttgaaaggattattagatgggttgatgcgagcaagctgttgtcaagtcatccatcgcaga
agcttagcacaactaaaacgtcctgcaaatgccgtttacggaggagtcatattccttata
gaacgcatcagtgcttctgcaccctttttgtccctaacacggactggaccaatccggttg
gagctcgagactgtcccacataagatacccacatcctaccccacaagcaacagagatatg
ggagtaatagttagaaactacttcaagtatcagtgtagattgatcgaaaaaggtcaatac
aaatcccactatcctcaaatttggttattctccgatgtattgtccattgacttcatggga
ccactctccatctcgtcttctttgctcagtcttctctacaaaccatcactgtcctctaag
gacaaaaatgaactcagggaattagccaatttgtcctcgtacttgaggtcaggagaagga
tgggatgatgtccatattaagtttttctccaaggatacactattatgctcagaagaaata
aggcatgcttgtaaatttggtatctacaaagaagtcttctccaccagtagttacccaact
tggggatcagaagcctttggcgcaatttcatcccagccggtcttctattcaacaagagaa
tcgagaaaatgcttggacactccccctcgagtccaaaatcctcttttatcaggtctccgg
ttgggacaactaccaactggagctcattacaaattaaggagcatacttcgacagctacat
gtcaattaccgtgacttcttgagttgtggagatggttcagggggaatgactgcatcatta
ctacgggagaatcgtcatagcagaggtatctttaatagtctacttgatttgtcaggaact
gtcatgagaggggcatcaccggaaccacctagtgccttagaaacattgggaagcgaaaga
gtcaggtgtatcaatgggtctacttgctgggagcatccttctgatctatctgatccgagg
acttggaagtatttttccaagttgaagagagacgtaggattgacgattgacctaatcacc
atggatatggaggtaagagatccatccatcaccaaactcattgagatgaatttgaagagc
catttatacgagctgcttgaacaagaagggacgttgatatacaagacctacggaacatac
ataactgagtttgatgacaatattcttacaatgatcggccctttcttccagcaggttgat
ctggtacaaactgaattcagcagctctcagacatcggaaatttacttcgtcggacgtagg
ctcaaaagacacgttgatgccccatgggtcgattggtcattcttacatgatacttggagg
acacaatatgcgttccgaagctctgttcaagaatttgtgcgcgcttcaaagtttcttaaa
aaggacaccctgtccggtataccgagtcagtttattccggatccctttgtaaacctggaa
acaatgttacaaatatttggagtgcctactggggtttcccacctgatagcattgaaagct
tccgatcatccaacagaactagtcaccttggccatcttctacatgatcacagtaagttac
tacaacatcaaccatattcgcatctacccagaaaagccaaatcccccatccgacggcatg
gcacagaatgtcggaggcgcaattgttggtctaagtttatgggtcagcctgatggaaaag
gacgttcagctgtatgagagatcattgaagtctattcatacttcgtttcccatcagatgg
atgagtgttccagttcccaatggatatcaacagatctgggacacttatggcagaggggta
tcaaaggactgtagattatctgattccctcgcagcaatcggaaattggatccgagctatg
gaacttgtcaggaataaaactagtcagtccgcgtttgatcaacacctaatgaactctctt
ctcaaattaattgatcaccatctaagctggcgagaactaaaaaagacaggaatcaaacat
tggctagtagggcggatagcatcactggacaaatccattatcacaattaaaagcgatata
atggacgagaactcttggagggactaa
DBGET
integrated database retrieval system
