KEGG   Viruses: 2193531
Entry
2193531           CDS       T40000                                 
Symbol
SPDVgp01
Name
(RefSeq) Salmon pancreas disease virus; non-structural polyprotein
  KO
K25300  Alphavirus polyprotein P1234
Virus
84589  Salmon pancreas disease virus
SSDB
Motif
Pfam: RdRP_2 ToMV_Hel_N Peptidase_C9 nsP3_ZBD Vmethyltransf FtsJ Viral_helicase1 Macro RdRP_1 AAA_30 RdRP_4 MeaB
Other DBs
NCBI-GeneID: 2193531
NCBI-ProteinID: NP_647496
RS: NC_003930
UniProt: Q8JJX1
LinkDB
Position
NC_003930:28..7833
AA seq 2601 aa
MMQNLTANPSAGATVTVNLPADHPALNQFKTAFPGFEVVASNRSSNDHAAARAFSHLATK
WIERDIGGRQVIVADIGSAPARRIGAPDNVTYHSVCPRKCAEDPERLASYARKLVRAVER
GDGHLVNEKITDLKDVLENPDTSLETTSICLNDDVSCKVKADIAVYQDVYAVDAPSTIYA
QADKGTRVVYWIGFEPFVFHTDAMAGSFPLYDANWSDSAVLAAKNLPLCYSGLSEDSIKW
RFRFRDKPLVPSGEIHYSVGSTHYVEDRDKLKSWHLPSTFHFVAPNKYTCRCDTVVSCGG
YVVKKITICEGIVGIPAKEELATSYHRDGVVVTKFSDTINHEQVSFPVVTYIPAVICDQM
TAMTANPVKYSDAVKLLVGLNQRIVVNGTTVRNVNSMDNSLIPVFARALCSWADEVRRDM
EDEQDLYGITSVTTWICICRAYDKRQQHTFYRRPKQSSGIYVPAKFTGSLRAALSATYLN
LPLKQLLLNTLKRAIKPMDQAIADETEALAHDAAEVHELTEEERRQQAANPSYIADVLGQ
DDDEEEAGDGMSDVDLGEEDGAGATIIDCQRGTVKVITAFGDNMMGEYLVLSPVTVLRTR
KLAILLGPLAEEVMQYVHKGRTGRYAIEKNNLKVLIPTGVSLKTDHFQALAESATLTYND
YLFTCRTLDQLATRGSARNTDEVYYKLVDAAKARDEYVYELSSKQCVKKEDATGTVLQGD
ICNPPYHQFAYEALRKRPAHTHDVHTIGIYGVPGAGKTAIITTEVTTRDLVASGKKENCE
DIKRCVLERRGLKIAARTVDSLFYGAYRGAVNTLYVDEAYACHSGTLLALIAAVRPTGKV
VLCGDPKQVGCVNQLQMRMHYNHEISDRVLRKNISRRCTHTLTAIVSNLNYEGRMKTTNP
CKKPVLIDTTGSTKPDKEALVLTCFRGWVKDLKFLYPHNELMTAAASQGLTREKVYAVRC
RVTTNPLYEPTSEHITVLLTRTNDELVWKTLPNDPLIPILSKPPKGDYSATMEDWEDEHN
GILAALREACVPRMNFAHGKRNTCWAVTSSRVLHEAGVQITPEDYNRIFPAFREDKPHSA
LAALDAVATLVWGLDTSSGILSGKGSFMRLENSHWSNSNRGYEYGLNLDALEGYEIANPR
MIKALKQRRGRECYDIETGKLVPLDPARVQVPINRIVPHVLVDTSAAAKPGFLENRLTVD
RWDQVHSFKTRAAVKFAELTKRVSYNSVLDLGAAPGGVTDYCVKKGKTVTSVSEQWDTKP
RGAVVVTADINGPLNNLGIFDLVFCDAAGPRRYHHYAQCEDHAVLFTSACKHGVERTAKG
GVFIVKAYGMADRRTERAVEGTARYFRSVSVEKPVSSRITNVEVFFKFSGRCRPHARSIA
HLGPQLTDIYARTWKAYKMLARGSVADKVKVAEILNSMVGAAPGYRVLNRNIITAEEEVL
VNAANSNGRPGDGVCGALYGAFGDAFPNGAIGAGNAVLVRGLEATIIHAAGADFREVDEE
TGARQLRAAYRAAATLVTANGITSAAIPLLSTHIFSNGRNRLEQSFSALVEAFDTTECDV
TIYCLANNMAARIQQLIDAHAREEFDEEVVVEEEEEHEADAMSDTETLSSFGDETVWVPK
HSTLAGRPGYSAYYGDRRSLFVGTKFHRAAVAMSSIEAAWPKTKEANAKLIEYIRGQHLV
DVLKSCPVDDIPVGRPPSSLPCGCIYAMTPERVTVLKQRPQEGFVVCSAFKLPLTNIQDV
TKVECTVRAPAEEPRPVRHLQERRPAQAAVRQLRPAAVAASVAASHTASRTSTASSRRTP
APGSVQVRLLPPRDGTESRSSRMGSQSSVTSSAGSVPPAPRRAPAVSAASLASSAHSRSV
RSAPAMRAASAGARSVRSAQSGSTGHRAGAFSVAGSVRQPSGPPSSVSTPAAIRGLTRDQ
FDAVRVRARRNLELEGSEHGSQSSFHSGSLAVGSSASSYSQRSDDQDTGTEPSSRGAAVR
TRRRGQRDGLGGYIFSSDQGTAHLSQHNTQTNNTTEVLMRTSVLPSNDHGTPDLPAETRK
RLAYQMRPTQKNKSRYLSAKVHNMKHKIVRCLQRGAGHYLREQHALPLWKNTFPKPRYSD
ACVVKFESVNTAIVAANMFIGCNYPTLSSFGITDKYDAYLDMVDGLNCNLDTVTFDPAKV
RSLPKKSEYNQPLIQSQVPGPMTSTLQSILMAATKRNCNVTQMRELPTMDSAAMNVEAFK
SFACKDTDLWTEFAEKPVRLSPGQIEEYVFHLQGAKANVMHSRVEAVCPDLSEVAMDRFT
LDMKRDVKVTPGTKHVEERPKVQEIQAADPMATAYLCAIHRELVRRLKAVLKPSIHVLFD
MSSEDFDAIVGHGMKLGDKVLETDISSFDKSQDQAMAVTALMLLRDLGVEEDLLTLIEAS
FGDITSAHLPTGTRFQFGSMMKSGLFLTLFVNTLLNITIAARVLREQLADTRCAAFIGDD
NVITGVVSDDMMVARCASWLNMEVKIMDMEIGNMSPYFCGGFLLLDTVTGTVSRVSDPVK
RLMKMGKPALNDPETDVDRCRALREEVESWYRVGIQWPLQVAAATRYGVNHLPLATMAMA
TLAQDLRSYLGARGEYVSLYV
NT seq 7806 nt   +upstreamnt  +downstreamnt
atgatgcaaaatctcacagctaacccctccgccggcgctacagttactgtaaatctgccc
gcggaccacccggccctgaaccagttcaagactgcgtttccagggttcgaagtggtggcc
agcaataggtcgtctaacgaccatgccgccgccagagctttctcccacttggctaccaag
tggattgagcgcgacatcggtggccgtcaggtcatcgttgccgacatagggagcgcacca
gcgagaagaatcggggcacccgataacgtcacataccacagtgtgtgtcctcgcaaatgc
gctgaagaccctgagaggctggcttcttatgccaggaaactcgtcagggctgtggagaga
ggagatggacacctcgtcaatgaaaaaatcactgacttgaaggatgttctggagaacccg
gacacgtcactggaaaccaccagtatctgcctgaacgacgacgtgagttgtaaagtaaag
gccgatattgcagtgtaccaggatgtgtacgcagtcgatgctccgtctaccatctacgcg
caggccgacaaaggtacgcgagtggtatactggatcgggttcgagccgttcgtgttccac
acggacgctatggcgggtagcttcccgctatatgacgccaactggagcgactcggcggta
ctggcagctaaaaacctgccactgtgctactcagggttgtcggaggattccattaaatgg
agattccgtttccgtgacaagccactggtaccgtctggagaaatccactactcggtgggt
agcacccactacgttgaggaccgtgacaagctgaaaagctggcacctgccttctaccttc
cacttcgtggcacccaacaagtatacatgccgttgcgatacggtggtaagctgtggcggc
tacgtcgtaaagaagatcacgatctgtgagggtatcgtcggtattcccgcgaaggaggaa
ctggccacctcgtaccaccgtgatggagtggtggtgaccaagttctctgatacgatcaac
cacgaacaggtgtcattcccagtggtgacctacatccccgccgtcatctgtgatcagatg
accgccatgacggccaatcccgtcaaatactcggatgccgtcaaactgctggtaggactc
aaccaaaggatcgtggtcaacgggaccaccgtccgcaacgtcaactccatggataactcg
ctgattcccgtattcgctcgcgcattatgcagctgggcggacgaagttcggcgggacatg
gaggacgaacaagacctgtacggtatcacgtccgtcaccacatggatctgtatctgcaga
gcgtatgacaaacgccagcagcataccttctaccgtaggcccaagcagtcctcgggcata
tatgtgcctgccaagttcacagggtcgctgagagccgccctctcagccacctaccttaac
ctgcctctgaagcaactgctgcttaatacgctcaaacgtgcgattaaacctatggatcag
gccatcgcagatgagacagaagcacttgcgcacgacgcagctgaggtgcacgagttgaca
gaggaggagcgcaggcaacaggccgccaatcctagttacatcgcagacgtgctgggccaa
gacgacgacgaggaggaagccggcgacggcatgtctgatgtggacctcggcgaagaagac
ggggcgggtgccaccatcatcgattgtcaaagaggcaccgtgaaagtaatcacggcgttc
ggtgacaacatgatgggggaatacctagtattgtccccggtgaccgtgttgcgcaccagg
aaactggccattctgctcggaccactcgcggaagaagtgatgcagtatgtccacaaaggc
cggaccgggcgctatgccattgagaagaataacctgaaggtactcatccctacgggggtg
tccctcaagaccgatcacttccaggcccttgccgaaagtgctaccttgacctacaacgac
tacctgttcacatgccgcacgctcgaccagctggcaacaagaggatcagcaagaaacacc
gacgaagtctactacaagcttgttgacgccgctaaggcgagggacgaatacgtttacgaa
ctgtcctccaagcaatgcgttaagaaagaagatgcaacaggcacagtcctccaaggggac
atatgcaatccgccttatcaccagtttgcctacgaggcgctgcgtaaaaggccggctcac
acacacgacgtccacacgattggcatctacggggttccgggtgcaggaaaaaccgctatc
atcacaaccgaagtaactacacgcgacttggtcgctagtggaaaaaaggagaattgtgaa
gacatcaagcggtgcgtgttggagagacgcggcttgaaaatagccgcacgtacggttgac
tcactgttctacggtgcataccgaggagcggtcaatacgctgtacgttgacgaggcttac
gcctgtcactcgggcactctgctcgccttgatcgctgcggtaagaccgacgggaaaggtg
gtgctttgtggtgaccctaaacaagtcggatgtgtgaaccagctccaaatgcggatgcat
tacaaccatgagattagtgaccgcgttttgcggaagaacatctcccgccgttgcactcat
acgcttacggccatcgtttcaaacctcaactacgaaggtagaatgaagactacgaacccg
tgcaaaaaacccgtactaattgacaccaccggatccaccaagcccgacaaggaagcgttg
gtgttgacgtgcttccgcgggtgggtcaaggatctaaaattcctctatcctcacaacgag
ctcatgactgcggccgcttcgcagggcctgacccgcgaaaaggtgtatgccgttcgttgt
cgtgtcacgacgaacccactctatgagccgacctctgagcacattactgtccttttgacg
cgcaccaacgacgaactggtatggaagacactgccaaacgacccgctgatccctatactc
tccaagccaccgaaaggagactactccgctaccatggaggattgggaggatgaacacaac
ggtatcctggctgccctcagagaagcgtgtgtcccacggatgaatttcgcgcatgggaag
cgtaatacctgttgggcagttacgagcagccgggtgctgcatgaggcgggcgtccagata
acgccggaggactataaccgtatctttccggcgtttcgagaggacaagccgcattcggct
ctggcagccttggatgccgtcgctactctcgtgtggggcttggatacttcctcgggcatt
ctgagtggaaaaggcagcttcatgcggctggagaacagccactggagtaactccaacagg
gggtacgagtacggcctcaacctggacgcactggaaggctatgagattgccaatccacgc
atgattaaagcgcttaaacaacggcgcgggcgcgaatgttacgacatcgaaacggggaag
ttggtgcccctggatcctgccagggtccaagtgccgattaaccgaatcgtgccccacgtg
ttggtggacacttctgcagcggccaaaccaggcttcctggaaaacagactcacagttgac
agatgggaccaagtgcacagcttcaagacaagagcagcagtcaagtttgcagaactgacg
aagcgtgtctcatataactcagtccttgaccttggagccgccccgggaggagtgaccgac
tactgcgtgaagaaaggaaaaaccgtcacaagcgtctccgagcagtgggatactaagccg
agaggcgctgtggtcgttacggcagatatcaacggcccacttaacaacctaggtatcttc
gacctagtgttttgtgacgcagctggaccacgacgctatcaccactacgcgcagtgcgaa
gaccacgccgtgctgttcacatcagcatgcaaacatggggtggagcgcacagccaagggc
ggagtcttcattgtgaaggcgtacggaatggcggaccgccgaacagagagggcagtggaa
ggtacagcgaggtatttcaggtccgtttcggtcgaaaagcccgtctcctcccgtataacc
aacgtggaagtcttcttcaagttctctggcagatgtcgcccacacgcacgttccatcgca
catttgggccctcaactgaccgacatttacgcccgtacgtggaaggcgtataaaatgctg
gcgagaggcagtgtcgctgacaaggtgaaagtggcagagatacttaactcaatggtaggt
gccgcaccggggtacagagtcctcaacaggaacatcatcactgccgaagaggaagttctg
gtcaacgccgccaacagcaacggtagacccggtgacggtgtgtgtggtgcgctctacggc
gcgtttggggacgcgttccccaacggtgcaatcggcgcgggaaacgcggtcctggttcga
ggactcgaggctaccatcatacacgcagccggagctgacttcagagaggttgacgaagaa
accggcgcgcggcagctaagagcagcataccgcgcggcggctaccctagtcacggccaac
ggcatcaccagcgccgccatccccttgctgagtacacacatcttctctaacggtcggaac
aggctggaacagtcgtttagtgcactggtggaggcgttcgacacgacagagtgcgacgtc
accatctactgcctcgccaacaacatggccgcgaggatccagcaactgattgacgcccac
gctcgcgaagagtttgatgaggaagtggttgtggaagaggaagaggaacacgaagccgac
gcaatgagtgacacggagacgctgtccagtttcggcgacgaaacggtatgggtgcctaaa
cacagcactctggctggaaggccagggtacagcgcctactacggcgaccgcagatccctt
tttgtcggcacgaaattccatcgtgcagcggtcgctatgtcgtcgattgaggcggcttgg
cctaagaccaaggaagccaatgctaaactcatcgagtatatacgagggcaacacctcgtt
gacgttctaaagagctgcccggttgacgacatacccgtgggcagaccgccttctagccta
ccctgtggctgcatatacgccatgaccccggaacgggtcacagtactgaaacaaagaccg
caggaaggtttcgtggtgtgcagtgcattcaagctgcctctcaccaacatccaggacgtc
accaaggtggagtgcactgtgagagcacccgcagaggaacctagaccggtgcgccatctg
caggagaggcgcccagcgcaggccgccgtgaggcagcttaggccggcagccgtggctgcc
agtgtcgccgcgagtcacacagccagcaggaccagcactgcctcgagccgccgcacacct
gcgccgggttcggtgcaggtgcgtttactgccgccgagagatggtacggaatcacgcagt
tctcgaatgggctcgcagtccagcgtcacatcatcagcgggatccgttccgccggcgccc
cgaagggcgccagctgtgtcggcggcatcgttggcgagcagcgcccatagccgcagtgtg
cgcagcgcccctgctatgagggccgccagcgcgggtgccagaagcgtgcgcagcgcccaa
tccggttccaccgggcacagagcgggcgccttcagcgtcgccggctcggtgagacagccc
agcgggccgcctagtagcgtgagcacacccgccgcgatcagagggctaacacgggaccag
tttgacgccgtaagagttagggcccgcaggaacttggaacttgaggggtcggagcacggc
agtcaatctagcttccactccggctcgctggcggtggggagctccgctagtagctatagc
caacgctccgacgatcaggatacgggcactgaaccctcaagccgcggcgccgccgtgaga
actcggcgcagagggcaacgggacggcctcggagggtacatattctcatctgatcaaggt
acggctcacctcagccagcacaacacccagacaaacaacacaacggaagtgttgatgaga
acgtcagtactgccgagcaacgaccacggcacaccagatctgcctgcagaaacgaggaag
aggttggcgtatcaaatgcgccccactcaaaagaacaagagtcgctacctgtccgcgaag
gtccataacatgaaacacaagattgttcgatgtttgcagcgaggtgccgggcactacctg
agagagcagcacgctctgccgctgtggaaaaacaccttccctaagcccaggtactccgac
gcctgcgtggtgaagttcgagagcgtcaacacagcaatcgttgcagccaacatgttcata
gggtgtaattaccccaccttaagctcgttcggtatcacggataagtacgatgcttacctg
gacatggttgatgggctcaattgcaacctcgacaccgtgacgttcgaccctgctaaggtg
cgttccctgccgaagaaatcagagtataaccagccgctcatacagtcccaagtacccgga
cctatgacatccactctgcaaagcatcctcatggccgccaccaaacgtaactgcaacgtc
acgcagatgagagagctcccgactatggactcagcggcaatgaacgtggaggcttttaaa
agtttcgcctgtaaggacaccgacctgtggactgagttcgcggaaaaaccagtaaggttg
tcgcccggccaaatcgaagagtatgtctttcatctacaaggggccaaggccaatgtgatg
cacagcagagtcgaagccgtatgccctgacctctcggaggtggctatggacaggttcaca
ctagacatgaaacgcgacgtcaaagtgacgccaggcacgaagcacgtagaggagagacct
aaagtccaagagattcaagcggccgaccccatggccaccgcgtacttgtgcgccatccat
agagagctagtccgaaggctgaaggccgtcctgaaaccgtctatacacgtgttgttcgat
atgagctccgaggattttgatgctatcgtgggccatgggatgaagttgggtgacaaggtg
ctggaaacggacatctcctcattcgacaagagccaggaccaagccatggcggttacagcg
ctgatgctgctgagggacttgggagtagaagaagacctcctgaccctaattgaggcgtct
ttcggcgacatcacttctgcccacctgcccacaggcaccagatttcagtttggatcgatg
atgaagtctggactttttctgacgctgttcgtgaacacgctgcttaacatcaccatagct
gcccgagttttacgggagcagctggctgataccaggtgtgccgcgtttatcggtgacgac
aacgtaatcaccggagtagtgtctgacgacatgatggtggccaggtgcgcatcctggctg
aacatggaggtgaagatcatggacatggaaattggcaacatgagtccttatttttgtggc
ggcttcctgttactcgacacggtaacaggcactgtaagccgagtgtcggaccctgtaaaa
cgcctgatgaagatgggaaaaccggccctgaacgatccagaaacggacgtggacagatgc
cgcgcactgcgcgaagaagtggaaagctggtacagagtggggattcagtggccactgcag
gtggctgccgccacacgctatggcgtgaaccacctgccgctggccacaatggcgatggcc
acgctcgcccaggacttgagatcgtacctgggcgcgcgaggggagtacgtatccctctac
gtctaa

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