Viruses: 22220328
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Entry
22220328 CDS
T40000
Symbol
NP1450L, ASFVgp094
Name
(RefSeq) African swine fever virus; RNA polymerase subunit 1
KO
K26372
Asfivirus DNA-directed RNA polymerase RPB1 [EC:
2.7.7.6
]
Virus
10497
African swine fever virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_7
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-GeneID:
22220328
NCBI-ProteinID:
NP_042792
RS:
NC_001659
UniProt:
P42486
Structure
PDB
LinkDB
All DBs
Position
NC_001659:complement(112254..116606)
Genome browser
AA seq
1450 aa
AA seq
DB search
MEAGYAEIAAVQFNIAGDNDHKRQGVMEVTISNLFEGTLPAEGGIYDARMGTTDHHYKCI
TCSHQRKQCMGHPGILQMHAPVLQPLFIAEIRRWLRVICLNCGAPIVDLKRYEHLIRPKR
LIEAASSQTEGKQCYVCKAVHPKIVKDSEDYFTFWVDQQGKIDKLYPQIIREIFSRVTYD
TVVKLGRSKNSHPEKLVLKAIQIPPISIRPGIRLGIGSGPQSFHDINNVIQYLVRKNLLI
PKDLQIVRGQKIPLNIDRNLQTIQQLYYNFLLDSVSTTATQGGTGKRGIVMGARPAPSIM
RRLPRKEGRIRKSLLGSQVWSISRSTICGNSDLHLDEVGYPISFARTLQVAETVQHYNIN
RLMPYFLNGKRQYPGCSRVYKQITQSVHDIEGLKQDFRLEVGDILYRDVVTGDVAFFNRQ
PSLERSSIGVHRIVVLENPKISTFQMNVSACAWYNADFDGDQMNLWVPWSVMSRVEAELL
CSVRNWFISTKSSGPVNGQVQDSTVGSFLLTRTNTPMGKNVMNKLHAMGLFQTTQTDPPC
FANYSPTDLLDGKSVVSMLLKQTPINYQRAPTWYSEVYAPYMHYNKQDISTQIRNGELIE
GVLDKKAVGAGSSGGIYHLISRRYGPQQALKMIFATQQLALNYVRNAGFTVSTADMLLTP
EAHQEVQEIINKLLLESEEINNRLLHGDIMPPIGLTTHDFYEKLQLNALKFPDRILKPIM
NSINPETNGLFQMVATGAKGSNPNMIHIMAGIGQIEINTQRIQPQFSFGRTLVYYPRFAL
EAQAYGFICNSYIAGLTSPEFIFGEMNGRFDLINKALSTSSTGYANRKAIFGLQSCIVDY
YRRVSIDTRLVQQLYGEDGLDARQLETVRFETIMLSDQELEDKFKYTGIQSPLFEEEFSR
LKKDRDKYRQIFLNVENFNFSQLLTDVRQVPVNVASIVKNILLSSTSGVLPFDEKSILQK
YAMVKTFCKNLPYVFINNIQERLQTPIPVYLKRAAALMRMLIRIELATVKTLNITCEQMS
AILDLIRLQYTQSLINYGEAVGILAAQSVSEPLTQYMLDSHHRSVAGGTNKSGIVRPQEI
FSAKPVEAEQSSEMLLRLKNPEVETNKTYAQEIANSIELITFERLILQWHLLYETYSSTK
KNVMYPDFASDVEWMTDFLENHPLLQPPEDIANWCIRLELNKTTMILKSISLESIINSLR
AKHPNTYIMHSVENTASGIPIIIRIYLRESAFRRSTNTRMATDEKIAVNVVDKLLNSTIR
GIPGIKNANVVKLMRHRVDAQGKLVRLDNIYAIKTNGTNIFGAMLDDNIDPYTIVSSSIG
DTMELYGIEAARQKIISEIRTVMGDKGPNHRHLLMYADLMTRTGQVTSLEKAGLNAREPS
NVLLRMALSSPVQVLTDAAVDSAVNPIYGIAAPTLMGSVPRIGTMYSDIIMDEKYITENY
KSVDSMIDML
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggatatgccgaaatagccgccgttcagttcaatattgccggtgacaatgac
cataagaggcaaggcgttatggaggttaccatttctaatttatttgagggcacccttccc
gccgaggggggtatctatgatgcgcgaatgggaaccaccgatcaccattataaatgcatc
acttgctcacaccagcgcaagcaatgtatgggacaccctgggatactgcagatgcatgct
ccggtgcttcagccgctcttcatcgccgaaatacgacgatggttaagggttatatgcctc
aactgcggggctcccattgttgacctaaagaggtacgagcatcttattaggcctaagcgt
cttattgaagcggcttcaagccaaaccgaaggaaagcagtgctacgtctgtaaggcagta
caccccaaaattgttaaggactcggaagattattttaccttttgggtggatcagcagggc
aagattgacaaactgtacccgcagatcatcagagagattttttcgcgcgtaacctacgac
accgttgtaaaactggggcgaagtaaaaactcccatcccgaaaaacttgtgcttaaggcc
attcagatcccccccatcagcatacgacctggcatcagattgggaatcgggtcaggcccc
caaagctttcacgacattaataacgtgatccagtatctggttcgaaagaatctgctgatc
ccgaaggacctacaaatcgtgcgcggccaaaaaatacctttaaatattgaccgcaatttg
caaaccatacagcaactttactataactttttgttggattccgtttccaccaccgcaacc
cagggaggcacgggaaagcgtgggatcgtcatgggggcccgccccgctccctctatcatg
cgaagacttcctcgcaaggagggaagaattcgtaaatccctactgggcagccaggtatgg
tcgatcagccggtccaccatctgcgggaactcagaccttcacctggacgaggttggctat
cccatttcctttgcacgaacgctgcaagttgcggaaacagtgcaacattataatattaat
agattaatgccctattttttaaatggaaagcgccagtaccctggttgttcaagagtgtat
aagcaaataacacaatccgttcacgatattgagggtctcaaacaagactttaggctggag
gtaggagacatcctttaccgtgatgtcgtcactggcgacgtcgcgttttttaatcgccag
ccttctctcgaacgaagcagcataggggttcaccggattgtcgttcttgaaaacccaaaa
atttctacgtttcaaatgaatgtcagcgcatgtgcctggtataatgcggactttgatggg
gatcagatgaatctctgggttccctggagcgtcatgagccgcgttgaggccgaactactt
tgttctgtgcgaaactggttcatttccacgaagagttcgggtcccgttaatgggcaggtg
caggattccacagtgggaagctttttgcttacacgcacgaacacccccatggggaaaaat
gtgatgaacaaactgcacgccatgggattgtttcaaacaacccaaacggacccaccttgt
tttgccaactactccccaactgacctgctggatggcaaatcggttgtatctatgctactg
aagcagacccccatcaattatcaacgagcccccacatggtactcagaagtgtatgcgccc
tacatgcattataacaagcaggacatctctacacaaatacgcaacggcgaactcattgaa
ggcgtccttgacaaaaaggccgtcggagcgggctcctccggtggaatctatcaccttatt
tcgcgtagatatgggccgcagcaggccttgaaaatgatatttgcgacccagcagctcgcc
ctgaactacgtgcgcaacgccggattcacagtgtccacggccgacatgctcctaaccccg
gaggcacatcaggaggtccaagaaattatcaataaactgctgcttgagtcggaggaaata
aacaaccggctgcttcatggagacatcatgccgcctataggcctgacaacgcatgacttc
tacgaaaaattgcagctgaatgcgcttaagtttcccgataggattttaaagccgattatg
aattccattaatccggaaaccaatgggctttttcagatggtggccactggcgccaagggc
tcaaaccccaatatgattcacatcatggcgggcatcggccaaattgaaattaatacacaa
cgcattcaaccccagttttccttcggcaggaccctggtgtactaccccaggtttgccctg
gaggcgcaggcctacgggttcatctgcaacagctatattgcgggccttacctcccctgaa
tttatctttggggaaatgaatggaagattcgacttgatcaacaaagcattatcgacatca
tccacaggctatgccaaccgtaaagccatctttggccttcaatcctgtattgtggattat
taccgacgggtttccatcgatactcgtcttgtgcagcagttgtacggagaggatggcctt
gatgcacgccagctcgaaaccgtacggtttgaaaccatcatgctgtcggaccaggaactt
gaggacaaattcaagtacaccgggatacaatcccccttgtttgaagaagaattttcacgc
cttaaaaaggatagagataaatatcgacagatcttcctaaacgtcgaaaattttaatttc
agccagctgcttacagatgttagacaggtgccggtaaacgtggccagcatcgtaaaaaac
attctactgagctccaccagtggcgtgcttcccttcgacgaaaaaagtattctacaaaaa
tacgcgatggtcaaaacgttttgcaaaaatcttccatacgtgtttattaacaacattcag
gaacgactgcaaacgcccatacccgtttatcttaaacgagctgccgctctgatgcgcatg
cttattcgcatcgaactggcaaccgttaaaacattaaacattacctgcgagcagatgagt
gccatcctggacctcataaggctacaatatactcaaagtcttattaactacggtgaggcg
gtgggaatcctggcggcgcagtccgtatcagaacccttgacgcaatatatgctggactcc
caccaccggtccgtggccgggggaaccaacaagtcgggaattgtgcggccccaggagatc
tttagcgcgaagcccgtagaggctgaacaatcctctgaaatgcttttacgtctaaagaac
ccggaagtggaaacaaataaaacatatgcgcaagaaattgctaacagcatagagcttata
acgttcgaacggttgatactgcagtggcacctattgtacgaaacgtattcaagcacaaaa
aaaaatgtgatgtaccccgattttgcaagtgatgtggaatggatgacggattttctggaa
aaccatcctctactacagcccccggaggatattgcaaactggtgtatccgcttggaatta
aataaaacaaccatgatattaaaaagcattagtctagaaagtattattaatagtctaaga
gctaagcaccccaacacctacatcatgcattctgtggaaaacacggcctcaggtattccc
atcattattcgcatatatctacgggaaagcgcctttagacgcagtactaatacccgaatg
gctacggatgaaaaaatcgccgtaaatgtggtggataaactattaaatagcacgattaga
ggaataccaggcatcaaaaatgcgaatgttgttaagcttatgcgccaccgtgtggatgcc
cagggaaagctggtaagactagataatatctacgccatcaaaacaaacgggaccaatatt
tttggcgcaatgcttgatgataacatcgacccatacaccatcgtgtcgtcctctatagga
gacaccatggagctttatggcatagaagcggcccgacaaaaaattattagtgaaattaga
acggttatgggggacaagggtcccaaccatcgtcatttactcatgtacgcagatctcatg
acaagaacgggacaggtcacctctctagaaaaggcagggcttaatgcaagagagccttcc
aacgtgttgttgcgaatggccttgtcgtctccagttcaggtcttgacagatgctgcggtt
gactccgccgtgaatcccatttacggtattgccgcgcctacccttatgggctctgttcct
cgcatagggaccatgtactctgacatcattatggatgaaaaatatattacggaaaattat
aaaagtgttgattccatgattgacatgttatag
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