Viruses: 22277236
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Entry
22277236 CDS
T40000
Symbol
PI30_gp71
Name
(RefSeq) Shigella phage POCJ13; LPD5 domain-containing protein
Virus
1498227
Shigella phage POCJ13
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
LPD38
LPD5
LPD1
MuF_C
Arm-DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
22277236
NCBI-ProteinID:
YP_009100293
RS:
NC_025434
UniProt:
A0A088CC40
LinkDB
All DBs
Position
NC_025434:49404..57785
Genome browser
AA seq
2793 aa
AA seq
DB search
MAYSEEQRPEAQLGNQNRNSLNIQQPGETDSYEAFFSDPNRWKDNSTSFSLGDVLPTMGK
GFAQSVRGTGEMARGLGDAMIQSPVKTGVRILNEFSRMGLPGVATVQDIFAGGSRGADEV
IDTLPDGKNAVTDTVGKGLKATGKAVSDGAKASDEWLTDNMSPGAVRALNTPMSEGYDDP
AVWLTKGMNFVGAVAADVFAGGVAKKVGDVTLRKMLTAGLEKKYIAAGMQPERATALAAD
AVDKKMPDLFRAGLITHSTVSAQGQSAMAAADAVLNADYSELAQSPKFQQTFLSIDADPQ
HAQLTDRQKMDLAKERVADEVRAQLATDPQLLAVNAMAAKLGDAQLLNLAMRGTANTVKS
GMIRNATEQGAINAAQGGYSRYQENMALRDTAGMDVSPWEGVADATIEGAALGAAMGAPF
GAVAGYRGRRQAADEAAMREAEVVQQDDAAPQPESVDPVAQHRESMQGMNREQLLEQYAD
ADMATEGDASATHRREAASQLLNELDEQAKRQAVMNELKAKPRSELLEEYRRLSQKEGRT
ETEEQQFQAIREVIRPQQEVTPEAQSQSENAEDGNGSIYPTVRFRDPNEVRIEINGNGAS
RPAERIEKVRPDNRYFTDEKSAMGSDVFRNAAATGLKPSVVKKGENQYAVEMDNPAFSEN
VATETINTLADGERIADADPMEQPAFMRDPRFRGFTGDDTEVQARLARGNAPTAEELVRS
QMAEGDAGPTAQELTERPRLPAPGDIHPGQGYPLPGEVARTPDENQAGRGGRFTTTGEVK
GQSFQKGRGPAQENAAGRQGEILEGETVRRGLPSPDEQSVTAPVREGLPAPDITHNVRMP
QPEQLPRTVRNSLPELAQQAEVRRQTGEVRDIPHAETTAHESETVAATDGEGAARGGVAG
GKKIEDFGEEIKGAAKHRYAQLAETLGKTLEDRDYATQPLSKLFPKPDYAKLANEGADAD
TLAMIALYRSDIPAKTKHNTAGWGESVKKVRHSVSEMLNGTVSAKRLAEWMEGRMPSRYA
DTWQLLRTLPPSQMDRASAYRVVSGVYQAAGGKRYDPPQKLYSLRNKDNKGSNLFFSESR
DELLTKAKVWFAEQEEKSQAKGDEKTAPSPDDKIRFDVYRNTRSGDIFIAYGKNKMRVRG
GFKSASDARKYIDSHRDELVRHVKDMREISREEQRNATNRDRTGPERRKGDVSPEQFSDA
FGFRGVQFGNYVEGPRRQADLNRAYDSLHDLAEVLNVPTKALSLNGRLGLAFGARGKGKA
AAHYESGEVAINLTKGNGPGALAHEWFHSLDNYFGRYDVSTDGKITSGGDFMTEAQRARR
VFKDGRYVDAEYPVRQEVYDAFKGVIQAIKNSDMPRRSALLDEVRSKPYWSTDVEMAARA
FERYVQDKARMAGVENDYLVNIRKAPEHNTDNTWAYPTNAELDGGIREAFDHLFRTLKTR
ETDKGVAFYSRKGVTRTPEGNLISDVNRSAEAKGSPVPQVEAVARGVMSGIKDSDLKVRV
VKSQKEAEALAGESFDGYGRVHAFYRPDKREIVLVADNIPDGRTVREKLRHEIIHHAMEH
VVTPAEYQTIIKTVLKTRDSDNATIREAWRKVDASYGKESPEVQAGEFLAHMAEKQPNKF
VAAWERVVALVKGVLRRTGLLKPTELNDIRLVRETIRTLGQRVREGYTPREDGAGASSQY
SRSGKPDPFKVPEGEGERYRDDLARMMKSLRTTDLTVNIGRTPPVLRHLGAPDLPLVISR
DTVRKATNGVKHVVPMDVIERLPELMHDPDAIYRSATERNAVVMLLDAVDKNGDPVVSAV
HMKATQKLLEVNRIASVYGTENGKKLKSMEMAGLTLYRREKLNPDGSLYRGLQLPKDEHS
RQGSADKILYPEDIRKGPYYSRTSSLTPEETIASRFVRQMQDKFQVLKAVQENIRKTGGK
IDDSNNAYMAEELFHGKAENDLNVMKERYVQPLAKLLADYKIAQADLDEYLYARHAPERN
AHIAKINPKMPDGGSGMSNAEAAEIMQRVRNSGKQAQYDRLAGIIDDMLARRREIIREAG
LEESGVVDAWQKAYRYYVPLKGQDVDGVVSLPRTGKGFTIGGRESKQAMGRASRAQSPST
QAIQDLSESLIRNRKNEVGNAFLKLVQDNPDKDYWQVFTDDRPDTMRVIAERKDQETGET
IREVVERPVAMAMMADRYFTTKKNGKTYYIKLHDPRLMRAMKNMGPETSNAVIRTLGKVN
RFLATVNTSYNPEFLVSNFIRDVQTAVMNLKAEQGRSDGKLKGLDNLSALAVVKDSRSAM
SAVYASLRGKNLTGKGAQWQKVWKEFVEDGGKTGWFNMGDLEGQQKEMDRLVSLAKGGWK
GQSIGAWNSFLNLVEDANGAVENALRLSAYKHARDAGLSRQQAASLAKNMTVNFNRRGEQ
GALMNSLYMFANASIQGTANLVRTLGHLNGEGPLLERLRWKNLNVPQKIALAAVGAGYLL
GSLNRSVAGEDDDGVNWYDKVPSHVKERNLVIMKSVFGGKAGEYWSIPLPYGYNVFFLLG
HTAEGVAAGDLTASRAAGNVVGGVLGAFSPVGSETSETLSGALLKNAAPTILRPFANLAM
NENFMGAQIYQENMPFGTPKPDSQLGRRSTPEAYKAFASWLNAFSGGSQYRPGAVDITPE
SLKFWIDYISGGTGRFISKTTDAAVKSLNGIDIPEQQVPFLGKISGEVMPYADQQKMYDR
MTEIAQYHAELKSLTGAERTAFIDENNGKLSMNGLMQDTRKRLKDLRKQRDAIYADSSLS
LAQQAAIVKSVERDMKVAVDRFNREYNKKVGVD
NT seq
8382 nt
NT seq
+upstream
nt +downstream
nt
atggcctattcagaggaacagcgtcctgaggcgcaactcggtaaccagaatcgtaacagc
ctgaacattcagcaacccggcgaaactgacagctatgaagcatttttctctgatccgaat
cgctggaaggataacagtacgtcgttcagcctgggcgatgtattgccaacaatgggtaaa
ggtttcgcccagtccgtccggggaacaggggaaatggcccgtggactcggtgatgcgatg
attcagagcccggtaaaaacaggggtgcgtattttaaatgagttcagccgtatggggctg
ccgggtgtcgcaactgtgcaggatatttttgccggtggcagcaggggggctgatgaggtc
atcgataccctgcctgatggcaaaaacgcggttactgatactgtcggtaaaggtctgaag
gcaaccggtaaggctgtcagtgatggtgctaaagcctcggatgaatggctgaccgataat
atgtcgccgggtgctgtgcgtgcgctgaatacgccaatgagtgaaggctatgatgatccc
gcagtctggctgacgaaggggatgaattttgtcggtgccgttgcggcagatgtgtttgct
ggcggtgtggctaaaaaggtgggtgatgtcacactgcgaaaaatgctgaccgccgggctg
gagaaaaaatacatcgcggcagggatgcagccggaaagagccacggcactggcagcagac
gctgtcgataaaaaaatgccggatttattccgggcgggcctgatcacccattccacagta
agtgcacaggggcagagtgcaatggcggcagcagatgctgttcttaatgcggattactct
gagctggcgcagtcaccgaaatttcagcagacgtttttgtccattgacgccgacccgcag
cacgcacagcttactgatcgccagaaaatggacctggcaaaagagcgtgtggctgatgag
gtgcgtgcgcaactggcaaccgatcctcagttgctggctgtgaatgccatggcggcaaaa
ctgggcgatgctcagttgcttaatctggcgatgcggggcacggcgaataccgttaaaagc
ggcatgatcagaaacgccactgaacagggggcgattaatgcggcgcagggcggctattca
cgctatcaggaaaacatggcactgcgtgataccgccggaatggatgtgtcgccgtgggag
ggcgtggctgacgcaacgatcgaaggtgcagcccttggtgctgcgatgggggcaccattc
ggtgcggttgccggatatcgtggcagacgtcaggcggcagatgaagccgccatgcgtgag
gctgaagtcgtacagcaggacgacgcagccccgcaaccagaatctgttgatccggtggcg
cagcatcgtgaatccatgcaggggatgaatcgcgagcagcttctggagcagtatgctgat
gcggatatggcgacagagggtgacgcatccgcaactcatcgccgggaagccgccagccag
ctgttgaatgaactggacgaacaggcgaagcgacaggctgtgatgaatgagctgaaggcg
aagccgcgttctgaactgcttgaggaataccgcagactcagccagaaagaggggcgcacc
gagactgaagaacaacagtttcaggcaatacgagaagtcattcgcccacaacaggaagtg
acgccggaagcacagtcacagtctgaaaatgcggaggatggtaacgggagcatttacccg
acggtgcggttccgggacccgaatgaagtccgcattgaaattaacgggaatggtgcgtcc
agaccagcggaacgcattgaaaaggtgcgcccggacaaccgttatttcacggatgagaaa
agcgccatggggagtgatgttttccgtaatgccgccgccaccggcctgaaaccgtccgta
gtgaagaaaggcgagaatcagtatgccgttgaaatggataatcctgcgttctctgaaaat
gtggcaacggaaaccattaacaccctggctgacggagagcgtattgctgatgctgacccg
atggagcagcccgcgttcatgcgtgacccgcgattccgtggtttcacgggggatgatacg
gaggtacaggcccgccttgcccgtggcaacgcgccgacggcggaggagcttgtacgttca
cagatggctgaaggtgatgccggtccgacagcacaggagttaactgagcgtccgcgtctg
cccgcccccggcgatattcatcccggacagggatatccgttaccgggagaggtggcgcgt
acgccggatgagaatcaggccggacgtggtggtcgttttaccacaaccggtgaggttaag
ggccagagtttccagaaaggacgcggcccggcacaggaaaacgccgctggtcgccagggg
gaaatactggagggcgaaactgttcgtcgtggtctgccgtcaccggatgagcagagtgtt
accgccccggtacgtgaaggtctaccggctcctgacattacacacaatgtccgcatgcct
cagcctgaacagcttccccgaactgttcgcaactcattacctgagctggcacagcaggca
gaagtacgccgacagacaggagaagttcgcgacatcccgcatgctgaaacaacagcacat
gagtctgaaacagttgctgctactgatggtgaaggtgccgcacgcggaggtgttgccggg
ggcaaaaaaattgaagactttggcgaggaaattaaaggggcagccaaacaccgttatgca
cagcttgctgaaacactgggtaaaacgctggaagacagggattatgccacgcagccgctg
agcaaactgttcccgaaaccggactacgcaaaactggcgaacgaaggtgccgatgctgac
actctggcaatgatagctctgtatcgtagcgatattccggcgaagacgaaacacaatacg
gcaggctggggggagagcgtaaaaaaagtacgacacagtgtatcggaaatgctgaacgga
acggtcagcgcgaaacgcctcgcagaatggatggaaggcagaatgccctcccgttacgcg
gatacctggcaactgttacgcactctgccaccctcacagatggacagggcttctgcttat
cgggtggtatcgggtgtgtatcaggcggcaggagggaagcgttacgatccgccacagaaa
ctttattcactgcgcaataaggacaataagggtagtaacctctttttctcggaaagcagg
gatgaattactgacaaaggcgaaagtctggtttgcagagcaggaggaaaaatcacaggcg
aaaggtgatgaaaaaacagcgccttcaccggatgacaaaatccgctttgacgtttaccgg
aatacccgcagtggcgatatttttatcgcttacggtaaaaacaaaatgcgggtgagaggt
ggctttaagtcagccagtgatgcgcgtaagtacattgattcacatcgtgatgagcttgtt
cgtcatgtgaaggatatgcgggagatttcgcgtgaggagcagcgtaacgccaccaaccgc
gaccgtaccggaccagaacgccgtaaaggggatgtttcaccggagcagttcagtgatgcg
tttggtttccgtggtgtgcagtttggtaactacgtggaaggtccgcgtcgtcaggctgat
ttgaaccgggcttatgactcgctgcatgaccttgcggaagtactgaatgtaccgacaaaa
gcgctttccctgaacggtcgtcttggcctggcatttggtgcccgtggtaagggtaaggcg
gcggcacactatgagtcaggtgaggtggcaatcaacctgacaaaaggtaacggaccgggg
gcgctggcgcacgaatggttccattcactggataattattttggtcgttatgacgtttcc
actgacgggaagattacgtcaggtggcgactttatgacggaagcacagcgtgccaggcgc
gtatttaaagacggcaggtatgttgatgctgaatatccggtacgtcaggaggtttacgac
gcttttaaaggtgtgattcaggccattaaaaacagtgacatgccgcgtcgttcagcgctt
ctcgatgaggtgcgctcaaaaccgtactggtcaacggatgttgaaatggcggcacgtgcc
tttgagcgttatgttcaggataaggcgcgtatggctggcgtggagaatgattatctggtc
aatatccgtaaggcacctgagcacaacacagataacacctgggcttatccgacgaatgcg
gaactggatggcggtattcgtgaggcattcgatcacctgttccgcaccctgaaaacccgt
gagacggacaagggcgttgcgttttattcccgtaagggcgttacccgcacacctgaaggt
aatctcatttcggatgttaaccgtagtgcggaagccaaaggcagcccggtcccgcaggtt
gaagcggttgcccgtggcgtgatgagcggcattaaggacagtgacctgaaggtccgtgtg
gtgaagtcacagaaagaggctgaagcgctggcgggtgaatcgttcgacggttacggcagg
gtgcacgcattctatcgtccggataaacgagaaattgtcctggtggcggataacatccct
gacgggcggaccgtacgcgagaagttgcgtcacgagattatccaccatgccatggagcat
gttgtcacgccagcggaatatcagacgattatcaaaaccgtgctgaaaacccgcgacagt
gataacgccaccatccgtgaagcatggcgtaaggttgatgcgtcctatggtaaggaatca
ccggaagtacaggcgggtgaatttctggcacatatggcggagaaacagccgaataaattc
gtggcggcatgggagcgtgttgttgccctggtcaaaggggtactgcgtcgtacggggtta
ctgaaaccgacggaactgaacgatatcagacttgttcgcgagaccatccgtacgttaggc
cagcgtgtgcgggaaggttacacgccgcgtgaggatggcgcgggcgcatcgtctcagtac
tcccgtagtggtaaacctgatccgttcaaagtgccggaaggtgagggtgaacgttatcgc
gatgaccttgccagaatgatgaaatctctgcgtaccacagatttaacggtaaacatcggg
cgtacgccgccggtattgcgtcaccttggtgcaccggatttgccgctggttatttcccgc
gatactgtgcggaaggccaccaatggtgtgaaacatgtggtgccgatggatgttatcgag
agactaccggaactgatgcacgatccggatgcaatttaccgttccgcgacagaaagaaat
gcggttgtgatgctgcttgatgccgtggataaaaatggtgatccggtagtgtctgcggtg
catatgaaggcaacccaaaaacttctggaagttaaccgtattgcttctgtttacggaacg
gaaaacgggaaaaaactgaagagtatggaaatggctggcttaacattatacaggagagaa
aaactaaaccctgatggttctctgtacagagggctccaattgcccaaagatgagcactcc
cgtcagggttctgcggataaaatactctatcctgaagatattcgcaaggggccgtattac
tcccgtaccagcagtctgacaccggaagagacaattgcatcgcgttttgtgcgccagatg
caggataaattccaggtgctgaaagctgttcaggagaatatccgtaaaactggtggaaaa
atagacgacagtaacaacgcttatatggcggaagaactcttccacgggaaggcggaaaac
gacctgaacgtgatgaaggagcgctacgttcagccactggctaaattactggcggactac
aaaattgcgcaggccgatctggatgagtacctctacgcccgtcatgcaccggaacgtaac
gcgcatatcgcgaaaatcaacccgaaaatgccggacggcggttcggggatgagcaacgcg
gaagcggcggaaatcatgcagcgtgtgcgtaacagcggcaaacaggcacagtatgaccgt
ctggcagggattattgacgatatgctggcccgtcgccgtgagattatccgtgaggcagga
ctggaagagagcggcgtggtggatgcctggcagaaagcctaccgttactacgtccccctg
aaagggcaggatgttgacggtgtggtgtcactgccacgtacaggcaagggattcaccatc
ggcgggcgtgaaagtaagcaggccatggggcgtgcatcccgcgcacagtctccttccact
caggcgatacaggatttgagtgaatcgctgatccgcaatcgcaaaaatgaagtgggtaac
gccttcctgaaactggtacaggataatcccgacaaggattactggcaggtattcactgat
gacagaccggataccatgcgtgtgattgcagagcgcaaggaccaggaaactggtgaaacc
attcgcgaagttgtcgagcgtccggtggcgatggcaatgatggcagaccggtacttcacc
accaaaaagaacggcaaaacgtactacatcaaactccatgatccgcgcctgatgcgtgcg
atgaagaatatgggaccggaaaccagtaacgcagtaatccgtacgctggggaaagttaac
cgcttcctggcaacggtgaacacgtcgtataacccggaattcctggtcagtaacttcatc
cgtgacgtgcagacagcggtgatgaatctgaaggcggagcagggaaggagcgacggcaaa
ctgaaagggctggataacttatccgcactggctgtggtgaaagacagccgttctgctatg
tcagccgtatacgccagtctgcgtggcaaaaacctcacgggcaaaggtgcgcagtggcag
aaggtgtggaaagagtttgttgaggacggaggtaaaaccggctggtttaacatgggtgac
cttgaaggccagcagaaggaaatggatcgccttgtatcgctggcgaagggaggatggaaa
ggccagagtatcggtgcatggaattcgttcctgaacctggtcgaggatgccaacggtgcg
gttgaaaacgcactgcgtctgtcagcttataaacacgcccgtgatgccggtttgtcacgc
cagcaggcggcgtctcttgccaaaaacatgacggtgaactttaaccgtcgtggtgagcag
ggggcgctgatgaactcgctgtacatgttcgccaacgccagtattcagggaacggcaaat
ctggtgagaacgctcggacatcttaatggtgagggacctttactggagcgtcttcgctgg
aagaatctgaatgttccgcagaaaatcgcgcttgccgctgtgggagcgggttatctgctt
ggctcgcttaaccgcagcgtggcgggtgaggatgatgacggggttaactggtatgacaaa
gtaccgtctcatgtgaaagagcgtaacctcgtcattatgaaatcggtgttcgggggcaag
gccggagagtactggagtattcctctgccttacgggtacaacgttttcttcctgcttggt
cacacagccgaaggggtggcagcgggcgacctgaccgcttcacgtgctgccggtaatgtt
gttggtggtgtgcttggggcattcagtcctgtgggcagtgaaacgtcggaaacactgtcc
ggggcattgctgaaaaatgcagcgccgaccattctgcgtccgtttgcgaaccttgccatg
aatgaaaacttcatgggggcgcagatttaccaggagaacatgccgtttggtacaccaaaa
cctgacagccagctgggaagacgttcaacgccagaagcgtacaaggcgtttgcatcctgg
ctgaatgcgttctcaggtggcagccagtaccgtcccggcgcggtggatatcacaccggaa
tcgctgaaattctggattgactatatctccggagggacagggcgcttcatttccaaaacc
acggatgcggcggtgaaatcgctgaatggtattgatataccggaacagcaggtgcccttc
ctggggaaaatttcgggggaggtgatgccgtatgcagaccagcagaagatgtacgaccgg
atgacagagattgcgcagtatcacgcagagctgaagagtctgaccggtgcagaaagaacg
gcgttcattgacgagaacaacggaaaattgtcgatgaacgggcttatgcaggatacccgg
aagagactgaaggatttgcgtaaacagcgtgatgccatttatgccgacagttctctcagt
ctggcgcagcaggcggcgatagtgaaatcggtagagcgggatatgaaggttgccgtggat
cgctttaaccgcgagtacaacaaaaaagtgggagtggattaa
DBGET
integrated database retrieval system
