Viruses: 23679880
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Entry
23679880 CDS
T40000
Symbol
VC59_gp1
Name
(RefSeq) Citrus yellow vein clearing virus; putative RNA-dependent RNA polymerase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
1214459
Citrus yellow vein clearing virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
2OG-FeII_Oxy_2
RdRP_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
23679880
NCBI-ProteinID:
YP_009124988
RS:
NC_026592
UniProt:
A0A0C5CI06
LinkDB
All DBs
Position
NC_026592:81..5030
Genome browser
AA seq
1649 aa
AA seq
DB search
MATIRGAIERITDTTVRTTLQEEACRQIRAELKNVEHINRYAIQPDAADALEHLGIGSNP
FSVALHTHGACKAIENQLLYVVGTLLPKERVTMLFLKKSKLNIMKRCPKFQDIFLNQHIE
PRDVSRYCDFNVQSTSTSIPTRTAYISDTLHFMDRRDLVRLFLNSPNLETLYATIVLPVE
AAYKQPSRYPEIYQINYDFDGFQYIPGGHGGGAYHHEFEQLQWLDTGHIHWRGPDCKEIR
MTITAQMLESLGANHLFCFKRGKLLTPRVRTFGRDTQVLLPKIFRPADKNFNRAIPLTLA
NKLLLYAKSINTVTFRDVVAKTRQLMKDKELETYTGNDLLHMANYFFAVGALSGVNSYDQ
LLGLSAWEACTVRIKNTITNLWEKIAGKKEFGKLLEALEWETFTYSRQVTEFTVTGLPAL
LPLPDISDQEEIFAQQDELDKITAGATKIRTIDIMRGQANRANPKTPINSTPAQGPQLPD
TPDPIDQAASKDLVTKLQKNKRIYIQDDGPEYLMGHMAEVPAWYLEQDDTTTRLKNRCAW
FFGPPTYRYGHNDIEYTTIEYYPWVERIGAIFGKYNTCLAQTYDAGARIGYHADDEDCYD
PDVTVVTINLTGNATFLLKTPTGTRTWKLKPGDFIIMKPGAQRCTKHAIRDCTTNRTSLT
FRWQARTCPTNLRKITNLPKATNQPQTTEWRPVTKPRPSTTASSDTQTPLVIDQERGYTT
TSDVTPTIRLPAENGNNTGAGPSSALTLADLNDNQAPTTNKGKEKLEEMVETGPTIMERF
LNTVQEPTQDLWDSASESAASYLAEGLGISAIQALPWAPHLELINALGFQGTERQYGPDN
CLIWPITHYRELPRSNNVEAPPEVLELLDCINRYPTDVPMLKTRAAAFGSDVKNLRIGAL
VKNQDKQWRASLALLCEENEHLLPTTVIHGAGGSGKSHLLQQWVASTERGNVVTILPTIE
LLRDWQNKCPHAPKETFKTFEKALIQNSAPVVIMDDYSKLPPGYIEAYVSLKGQCKLLIL
TGDPRQSHYHEENPEALISTLDPATDYFGKFCAYNINATHRNAKTFANALGVYSEKEIPT
TITCSSYQKSGWPTLVPSILKRTALNDMGQRSLTYAGCQGLTTPKVQIVLDNATPLCSDK
VMYTALSRAVDQIHFFNTGPNHTDYWEKMNATPFLKTFIDHTREETFAEHQPAEPTVREY
APATHFPPANENLALEPWVEPLTDKHSRELFHSALGHSNCVQTENTVVQLFPHQQAKDET
LFWKTIDARIKITTPEENIRACSIATDIGDILFLNYKEAMGLPQDPIPFEQALWDSCQAE
VQLTYLSKPLAALANAAQRQDPDFDSNKIQLFLKSQWVKKVEKMGCLRIKPGQTIASFMQ
QTVMLYGTMARYMRRIRTSLCPPEIMINCETNPNQIGTWVREYWNFNTQSHENDFEAFDQ
SQDANMLQFELIKAKYHSIPEEIIAGYRHLKCNAHIFLGTISIMRLSGEGPTFDANTECS
IAYNHTRYFVPKGTAQLYAGDDSACASPLSEKPSFQHISPELSLKSKAKIRTQQKGDFAT
FCGWLITPKGLIKNPTQLYASWLLAKHNKDLADVARNYALDLRIAYQLKDELYELLSPEE
LDHHQLLVREMIKHKMGHLLNLPEGFKTN
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggccactattaggggtgccatcgaacgcattacagacaccaccgtacgcactacactt
caagaggaggcatgccgccaaatacgcgctgaacttaaaaacgtcgaacacatcaaccgt
tacgctatacagcctgacgccgccgacgcactcgaacacctaggcattggttctaacccc
ttctctgtggcactgcacacacacggtgcctgcaaagcgattgagaaccaattactctat
gtagttggtaccttactcccaaaagaacgtgtcaccatgctcttccttaagaaaagcaag
ctcaacatcatgaaacgctgccctaaattccaagacatcttcctgaaccaacatattgaa
ccacgcgacgtttctaggtactgcgactttaacgtccaatccacctccaccagcataccc
acacgaacggcttacatcagtgacacactccactttatggaccgtagagacctagtccga
ctattcctaaacagcccaaatctagagactctctacgccaccattgttctcccagtcgag
gctgcttacaaacaaccgagccgctacccagagatataccagattaactatgacttcgac
ggtttccagtacatacctggaggccatgggggcggcgcctaccaccacgagttcgaacag
ctgcaatggttagacactggccatatccactggcgtgggcccgactgtaaagagattcgc
atgacaattaccgcccaaatgctcgaaagcttaggtgcgaatcatcttttctgcttcaaa
cgtgggaaactactcaccccacgtgtacgcactttcggccgagatacccaagtgctcttg
cccaaaatcttccgcccggccgacaaaaactttaacagggcaataccactaaccctagct
aacaaactactcctgtacgctaaatccattaacacagtgaccttccgcgacgtcgttgcc
aagacacgccaacttatgaaggacaaggagcttgaaacatacaccggcaacgacctgttg
catatggccaactatttcttcgctgttggagcactgtcaggagttaactcctatgaccaa
ttgcttggcctatccgcctgggaagcctgcaccgtccgtatcaagaacaccataacaaat
ctctgggaaaagattgccggaaagaaagagttcggcaagctattggaggcccttgagtgg
gaaacattcacatactcacgtcaagtgaccgaattcaccgttacgggactgcccgccctg
ctccccctcccagacatctcagaccaagaagagattttcgcccagcaggacgagttagac
aaaatcactgccggcgctaccaagatacggactattgacattatgcggggacaagctaac
cgcgctaacccaaaaactccgatcaactcaacaccggcccagggaccccaactgcccgat
acccccgacccaatcgaccaagctgcctccaaagacctcgtcaccaagcttcagaaaaac
aaacgcatttacatccaagacgacgggccggaataccttatgggacacatggctgaagtc
cctgcctggtatcttgaacaagatgataccaccactagactcaaaaaccgctgcgcttgg
ttcttcggcccacccacctacagatatgggcacaacgacattgagtacaccaccatagaa
tactacccttgggtcgagcgtattggagccattttcggcaagtacaacacctgtcttgct
caaacttacgacgccggagcccgtattggataccacgctgacgacgaagactgctacgac
cccgacgtcaccgtggtcaccatcaacctcactgggaacgccaccttcctgctcaagacc
ccaaccggcactaggacctggaaacttaaacctggtgacttcattatcatgaaacccggt
gcccaaaggtgcacaaaacatgccattagagattgcacaactaaccgcacatccttaacc
ttcagatggcaggcccgcacttgccccactaacctcagaaagatcactaacctacccaaa
gccaccaaccaaccccaaaccactgaatggcgtcctgtaactaaaccacgccctagcacc
accgcttccagcgacacccagaccccacttgtcatagaccaggaacgagggtataccacc
acctccgacgtgacaccaacgattaggctgcccgccgaaaatggtaataacaccggtgct
ggaccctcctccgcattaaccctcgccgacctgaatgataaccaagcgccgaccactaac
aaaggaaaagagaaacttgaggaaatggtcgaaactggcccaactatcatggaacgcttc
ctcaacaccgttcaggaaccaacacaagatttatgggactccgcctctgaatccgccgcg
agctacctcgctgaaggcctcggcatctctgccatccaagcactcccttgggcacctcac
ttggaactcatcaatgcattaggcttccagggcactgaaaggcaatacggcccagacaac
tgtctcatatggcctatcacgcattacagagaattgcccagaagcaacaatgtcgaagcc
cctccggaagtgcttgagctgctcgactgcatcaatagataccccactgacgtcccaatg
ctcaaaactcgagccgccgccttcggttcagacgtcaagaatctacgcataggggcactt
gttaagaaccaggacaaacagtggcgcgcatcactcgcactactttgtgaggaaaatgaa
cacctcctccctaccactgtaatacacggcgctggtggctccgggaaatcccacttactc
caacagtgggtggcgtctactgagcgcggaaatgtagtcaccatcttgcccactatcgaa
ctccttcgagactggcaaaacaaatgtccacatgcaccgaaagagactttcaaaaccttc
gagaaagcgctcatccagaacagcgcccccgtggttatcatggacgactactctaaactt
cccccagggtatattgaagcctacgtcagcctcaagggccagtgcaaacttctcatactc
actggagatcctagacagagccactaccatgaggagaaccctgaggccttaatctctact
cttgaccccgccacggactactttggcaaattttgcgcatacaacatcaacgccactcat
agaaatgccaaaaccttcgccaatgcgcttggggtgtactctgaaaaagaaatccccacc
accatcacctgctcatcctaccagaaaagcggttggccaacacttgtcccatccatcctt
aaaagaactgcgctcaacgacatggggcagcgctcactaacctacgcaggctgtcaggga
ctcaccaccccaaaagtgcagatagttcttgacaacgccacaccactatgctctgacaag
gtcatgtacaccgcactatctagagcggtggaccaaattcacttcttcaacactggccca
aatcacactgattactgggaaaagatgaacgccacacctttcctcaaaactttcatcgac
cacacacgtgaggagaccttcgctgagcaccaacctgccgaacccacagtgcgtgagtac
gcaccagcaacgcatttcccaccggctaacgagaacctagcactagagccgtgggtcgaa
ccgctgactgataaacactcgcgggaactcttccactctgccttaggccacagcaactgc
gtccagactgaaaacaccgtagtccaactttttccccaccaacaggccaaagacgaaacg
ctcttctggaaaacaatagatgccagaatcaagataaccaccccagaagagaacatcagg
gcttgcagcatagccactgacattggcgacatcttgttcctaaattacaaagaagccatg
ggtttaccacaagaccccatacccttcgaacaggcactctgggactcttgtcaagccgag
gtgcaactaacctacctcagcaagcctctggctgcactcgcaaatgccgcccaaagacaa
gaccccgactttgactccaacaaaatccaactcttcctgaaatcacaatgggtcaagaaa
gtcgagaagatgggctgccttaggatcaaacccggccaaactattgcttccttcatgcaa
cagactgtcatgctatacggaactatggctcggtacatgcgccgcatccgcacctcactt
tgcccacccgaaattatgatcaactgcgagaccaacccaaaccaaatcggaacatgggtg
cgtgagtattggaacttcaacacccagagccatgagaatgactttgaagcgttcgaccaa
tcccaagacgccaacatgttacaattcgagctcattaaggccaaataccactcaatcccc
gaggagatcatcgccgggtatcgacacctgaaatgcaacgcccacatcttccttgggact
atatcgatcatgaggttgtctggtgaagggccgacctttgacgccaacacagagtgctcc
attgcatacaaccacacaaggtactttgtgccgaaaggcaccgcccagctctacgccgga
gacgactctgcatgcgcgtcgcccctctctgaaaaacccagcttccaacatatctcacca
gagctcagcctcaagtctaaggccaagattagaacccaacagaaaggagactttgcgacc
ttctgtggctggctcatcactccaaaaggcctgatcaaaaaccccacccagctttacgcc
tcctggttattggctaagcacaacaaagatctcgcggacgtggccagaaactatgccttg
gacttacgcattgcctatcaacttaaagacgagctctatgagttattatcacctgaagaa
cttgaccaccaccaactgctcgtccgagagatgatcaagcacaaaatgggccatctcctc
aacctccctgaggggtttaaaacaaactaa
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integrated database retrieval system
