Viruses: 24271497
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Entry
24271497 ncRNA
T40000
Symbol
LAT, HHV1gp00s02
Name
(RefSeq) Human alphaherpesvirus 1; LAT
Virus
10298
Human alphaherpesvirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Other DBs
NCBI-GeneID:
24271497
RS:
NC_001806
LinkDB
All DBs
Position
NC_001806:join(118805..119464,121421..127151)
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NT seq
6391 nt
NT seq
+upstream
nt +downstream
nt
tcgcgggtggtgcgaaagactttccgggcgcgtccgggtgccgcggctctccgggccccc
ctgcagccggggcggccaaggggcgtcggcgacatcctccccctaagcgccggccggccg
ctggtctgttttttcgttttccccgtttcgggggtggtgggggttgcggtttctgtttct
ttaacccgtctggggtgtttttcgttccgtcgccggaatgtttcgttcgtctgtcccctc
acggggcgaaggccgcgtacggcccgggacgaggggcccccgaccgcggcggtccgggcc
ccgtccggacccgctcgccggcacgcgacgcgaaaaaggccccccggaggcttttccggg
ttcccggcccggggcctgagatgaacactcggggttaccgccaacggccggcccccgtgg
cggcccggcccggggccccggcggacccaaggggccccggcccggggccccacaacggcc
cggcgcatgcgctgtggtttttttttcctcggtgttctgccgggctccatcgcctttcct
gttctcgcttctccccccccccttcttcacccccagtaccctcctccctcccttcctccc
ccgttatcccactcgtcgagggcgccccggtgtcgttcaacaaagacgccgcgtttccag
ggcaccgacggccccgcccgaggaggcggaagcggaggaggacgcggccccggcggcgga
agaggcggcccccgcgggggtcggggccgaggaggaagaggcagaggaggaagaggcgga
ggccgccgaggacgtcaggggggtcccgggcccaccctggccgcgcccccccggccctga
gtcggagggggggtgcgtcgccgccctcttggcccctgccggcgcgagggggggacgcgt
ggactggggggaggggttttcctggcccgacccgcgcctcttcctcggacgcaccgccgc
ctcctgctcgacagaggcggcggaggggagcggggcggcgccggagggggcggcgccgcg
ggagggcccgtgcccaccctccacgcccggcccccccgagccgcgcgccaccgtcgcacg
cgcccggcacagactctgttcttggttcgcggcctgagccagggacgagtgcgactgggg
cacacggcgcgcgtccgcggggcgggcggccggctccgccccgggggccggggcgcgggg
gccgggccccggaggcggcgctcgcacgcacggggccacggccgcgcgggggcgcgcggg
tcccgacgcggccgcggacgcggggggcccggggcggggggcggagcctggcatgggcgc
cgcggggggcctgtggggagaggccgggggggagtcgctgatcactatggggtctctgtt
gtttgcaaggggggcgggtctgttgacaagggggcccgtccggcccctcggccgccccgc
ctccgcttcaacaaccccaaccccaaccccaacccccccggaggggccagacgccccccg
cggcgccgcggctcgcgactggcgggagccgccgccgccgctgctgttggtggtggtgtt
ggtgttactgctgccgtgtggcccgatgggcgccgaggggggcgctgtccgagccgcggc
cggctggggggctgcgtgagacgccccgcccgtcacggggggcgcggcggcgcctctgcg
tgggggggcgcggggcgtccggcggggggcgggcggtacgtagtctgctgcaagagacaa
cggggggcgcgatcaggttacgccccctccccggcccgccctttcctcgcccgcccgcct
attcctccctccccccccctcctcctcctcctcccccagggtccttgccgccccccgcct
caccgtcgtccaggtcgtcgtcatcctcgtccgtggtgggctccgggtgggtgggcgaca
gggccctcaccgtgtgcccccccagggtcaggtaccgcggggcgaaccgctgattgcccg
tccagataaagtccacggccgtgcccgccctgacggcctcctcggcctccatgcgggtct
gggggtcgttcacgatcgggatggtgctgaacgacccgctgggcgtcacgcccactatca
ggtacaccagcttggcgttgcacagcgggcaggtgttgcgcaattgcatccaggttttca
tgcacgggatgcagaagcggtgcatgcacgggaaggtgtcgcagcgcaggtggggcgcga
tctcatccgtgcacacggcgcacacgtcgccctcgtcgctccccccgtcctctcgagggg
gggcgcccccgcaactgccggggtcttcctcgcggggggggctcccccccgagaccgccc
ccccatccacgccctgcggccccagcagccccgtctcgaacagttccgtgtccgtgctgt
ccgcctcggaggcggagtcgtcgtcatggtggtcggcgtccccccgcccccccacttcgg
tctccgcctcagagtcgctgctgtccggcaggtctcggtcgcagggaaacacccagacat
ccggggcgggctaaggggaaaaaaggggggcgggtaagaatggggggggatttcccgcgt
caatcagcacccacgagttccccctctcccccccccgcctcacaaagtcctgcccccctg
ctggcctcggaagaggggggagaaaggggtctgcaaccaaaggtggtctgggtccgtcct
ttggatcccgacccctcttcttccctcttctcccgccctccagacgcaccggagtcgggg
gtcccacggcgtcccccaaatatggcgggcggctcctccccacccccctagatgcgtgtg
agtaaggggggcctgcgtatgagtcagtggggaccacgcccccaacacggcgaccccggt
ccctgtgtgtttgttgtgggggcgtgtctctgtgtatgagtcagggggtcccacggcgac
cccgggccctgcgtctgagtcaaaggggccatgtgtatgtgttgggggtctgtatatata
aagtcagggggtcacatggcgacccccaacagggcgaccccggtccctgtatatataggg
tcagggggttccgcaccccctaacatggcgcccccggtccctgtatatatagtgtcacgg
ggttccacgccccctaacatggcgccccaacatggcgcccggctcccgtgtatgagtggg
ggtcccccaacatggcggccggttccagtgtaagggtcgggggtcccccaacatggcgcc
ccccaatatggcgccccccaatatggcgccccagacatggcgcccggcccctcacctcgc
gctgggggcggccctcaggccggcgggtactcgctccggggcggggctccatgggggtcg
tatgcggctggagggtcgcggacggagggtccctgggggtcgcaacgtaggcggggcttc
tgtggtgatgcggagagggggcggcccgagtctgcctggctgctgcgtctcgctccgagt
gccgaggtgcaaatgcgaccagactgtcgggccagggctaacttataccccacgcctttc
ccctccccaaaggggcggcagtgacgattcccccaatggccgcgcgtcccaggggaggca
ggcccaccgcggggcggccccgtccccggggaccaacccggcgcccccaaagaatatcat
tagcatgcacggcccggcccccgatttgggggcccaacccggtgtcccccaaagaacccc
attagcatgcccctcccgccgacgcaacaggggcttggcctgcgtcggtgccccggggct
tcccgccttcccgaagaaactcattaccatacccggaaccccaggggaccaatgcgggtt
cattgagcgacccgcgggccaatgcgcgaggggccgtgtgttccgccaaaaaagcaatta
gcataacccggaaccccaggggagtggttacgcgcggcgcgggaggcggggaataccggg
gttgcccattaagggccgcgggaattgccggaagcgggaagggcggccggggccgcccat
taatgagtttctaattaccataccgggaagcggaacaaggcctcttgcaagtttttaatt
accataccgggaagtgggcggcccggcccattgggcggtaactcccgcccaatgggccgg
gccccgaagactcggcggacgctggttggccgggccccgccgcgctggcggccgccgatt
ggccagtcccgcccccgaggcgggcccgccctgtgagggcgggctggctccaagcgtata
tatgcgcggctcctgccatcgtctctccggagagcggcttggtgcggagctcccgggagc
tccgcggaagacccaggccgcctcgggtgtaacgttagaccgagttcgccgggccggctc
cgcgggccagggcccgggcacgggcctcgggccccaggcacggcccgatgaccgcctcgg
cctccgccacccggcgccggaaccgagcccggtcggcccgctcgcgggcccacgagccgc
ggcgcgccaggcgggcggccgaggcccagaccaccaggtggcgcacccggacgtggggcg
agaagcgcacccgcgcgggggtcgcgggggtcgcgggggtcgcgggggtcgcgggggtcg
cggggggctccggcgccccctccccgcccgcgcgtcgcaggcgcaggcgcgccaggtgct
ccgcggtgacgcgcaggcggagggcgaggcgcggcggaaggcggaaggggcgcgaggggg
ggtgggaggggtcagccccgccccccgggcccacgccgggcggtgggggccggggccggg
gggcggcggcggtgggccgggcctctggcgccggctcgggcggggggctgtccggccagt
cgtcgtcatcgtcgtcgtcggacgcggactcgggaacgtggagccactggcgcagcagca
gcgaacaagaaggcgggggcccaccggcggggggcggcggcggggcggccgcgggcgcgc
tcctgaccgcgggttccgagttgggcgtggaggttacctgggactgtgcggttgggacgg
cgcccgtgggcccgggcggccgggggcggcgggggccgcgatggcggcggcggcgggcca
tggagacagagagcgtgccggggtggtagagtttgacaggcaagcatgtgcgtgcagagg
cgagtagtgcttgcctgtctaactcgctagtctcggccgcggggggcccgggctgcccgc
cgccgccgctttaaagggccgcgcgcgacccccggggggtgtgttttggggggggcccgt
tttcggggtctggccgctcctccccccgctcctccccccgctcctccccccgctcctccc
cccgctcctccccccgctcctccccccgctcctccccccgctcctccccccgctcctccc
cccgctcctccccccgctcctccccccgctcctccccccgctcctccccccgctcctccc
cccgctcctccccccgctcctccccccgctcctccccccgctcctccccccgctcccgcg
gccccgccccccacgcccgccgcgcgcgcgcacgccgcccggaccgccgcccgccttttt
tgcgcgcgcgcgcgcccgcggggggcccgggctgccacaggtgaaaccaacagagcacgg
cgcactccgcacgtcacacgtcacgtcatccaccacacctgcccaacaacacaactcaca
gcgacaactcaccgcgcaacaactcctgttcctcatccacacgtcaccgcgcacctcccg
ctcctccagacgtaccccggcgcaacacaccgctcctgctacacaccaccgcccctcccc
agccccagccctccccggccccagccctccccggccccagccctccccggccccagccct
ccccggccccagccctccccggccccagccctccccggccccagccctccccggccccag
ccctccccggccgcgtcccgcgctccctcgggggggttcgggcatctctacctcagtgcc
gccaatctcaggtcagagatccaaaccctccgggggcgcccgcgcaccaccaccgcccct
cgccccctcccgcccctcgccccctcccgcccctcgccccctcccgcccctcgccccctc
ccgcccctcgccccctcccgcccctcgccccctcccgcccctcgccccctcccgcccctc
gccccctcccgcccctcgccccctcccgcccctcgccccctcccgcccctcgccccctcc
cgcccctcgccccctcccgcccctcgccccctcccgcccctcgccccctcccgcccctcg
ccccctcccgcccctcgccccctcccgcccctcgccccctcccgcccctcgccccctccc
gcccctcgccccctcccgcccctcgaataaa
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