Viruses: 2652427
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Entry
2652427 CDS
T40000
Symbol
ONMVp1
Name
(RefSeq) Oat necrotic mottle virus; polyprotein
Virus
112437
Oat necrotic mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Poty_coat
RdRP_1
Poty_PP
Peptidase_C4
Peptidase_C6
Peptidase_S30
Helicase_C
DEAD
Peptidase_S76
ResIII
Potyvirid-P3
Flavi_DEAD
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
2652427
NCBI-ProteinID:
NP_932608
RS:
NC_005136
UniProt:
Q6U6H0
LinkDB
All DBs
Position
NC_005136:131..9202
Genome browser
AA seq
3023 aa
AA seq
DB search
MEHSKCVLDGFGKQGVIANDPYVRCEARTLLFLSTEEEVDIVVNHHGSGSIFWSKDGVRT
QTSKNLYKAMSLGLGYDLAADVFVCGMCRSSCAHYRYFIEDHFACEKLVEKNCAYIKNER
FTKVVDAFPIMPAYATPAMETATLQWMSETSSCLADYCFQKPRVVHFHNEKTNQDETREK
TVTIEVTKDDFEEEYTVIKHAHRKNPIHEYKEKQLRMTSGNIAALIDQVARIMKSQGKTF
EIVGARGQKRFVKIPLKHTLGYPKREWDPLKDVPENCRNFLTTYSEITQWTRNVYDHEVT
HGWSGIVLSKMDVPQGYEQECVDGLFVVMGRCAHGRLQNALRPTCTHGLRWYSDKWVNAH
IPRNHDHCNEALKDTVEGTPDKMRQVLKTMFDMHDLRCSLCRLEWRNRSHDEHQELLYPQ
VTDYMNKNPKNKLTLFRTFADYMVGKEQPDERQLRPNEGLQLVDVWRTIKQTIHIPNRIV
YMGMFTDSYGNFDFFPNTSMPELFPRFMKPVTHRLKENGNIVTSFRYVDAEEIIQTSIES
LYPHFESTYWNAQARAVHRAQPLHECSMEINGETKVVCHWEGNTPLYNPIIRATPGQLPF
GVVNHLLSIGDRNGRHQYVPENGYCYMYIFACAMIFCGNSNRSTVDRFVNQVCNDLGPWP
KFSEVLRQLNWMATFYGCYDALVPVILVDHINKTMHVPTPYGIKQSGMHTIRVNTVLELI
SLDTMADGAMKDYKIGGFQETVLSIQACVKSRKEFVRKLNKDAEWLVDMFVNPSTLFALG
GLIEVHQLILADVENSFDKSAALLNLRQMAMKLGPHLESKQRVRQYMELMIQHRASVEAI
IPSTHMREEIKAYIDSLQRSVLEEQCLIEMDRVGGKEKMLVEQDISHGECAYNEFFNSIG
YLNFHGTVLRLTYSGPGRKVGEMCESLKNNWLTRYLRGPKVPEGCKESSLRTWRKVTHLF
GEAYKWAFCTMAANVLQVILIGLSTVFGAYLLRKILKMLRWEKEQESKELVEYQSKKEEA
WITRTMAVLYIISSLFSVEFSSALYSNLVKFRTIFDILKVNCEYQSGIFDSLKNQLGDIP
TFHEIQLYDHEATHVAVPPAILTFEKWFETRIVSGQQGYAPLDGNHVQLTMTKETIGDIA
TQVQASKSTEFLIIGHVGCGKSTAFPATLARNGRVMICEPTRVLVTNLQDSMLATKNISI
SAMMRNHRVMTASNITVTTYGYALHYLYNNSHNLAEYEYILFDEVHQTSAEMLVLYNWLK
STAWNGKLVKLTATNNTVNGDMQTQQGLDVKTWPVMDHRSFMQEQGRGTAHDASTLGDVI
IVFLTSFREIDESADILCKNPKLGVLKADSRHLRNKVSLMDDIEAMRSEKKYILATNILQ
NGVNIHADVVVDFGFKIVPSIDSDNRMITVKRQLINKSDRIQRLGRVGRMKMGYARKIGN
DIDASFALDEVTATEAALLAFGLGVAPVLQGVDQHTFGKITAEQVRTAARFEMQLSYMVW
MVNRDGTIATRLYELFKPLLLTPGNTHLAPYYESLVETHRFRTIGQYSSLGYIRTDEHHG
LILPFHHNDVSVEFAVRIGEAYMTSQVPNSIKLRVPAVNHREVAMKMSANPNEVGSILYV
VEQALVNEKTKLENLTQSYQQQQSAYCNVFLPNFNVAGRLTQAMDRIRQNVAVLQHQKTA
LEKAVVTYDYTKLVELLDENPSIASHVSYQAGPSQFVDDYILQKRNYGWMPYLALGTACT
LAGTALVMMYYRRMKHRVKYEGKAARNQQAKRQAARDRKVDRGSEYTYYDGGDTLYDGVQ
EYTNNSPDWTDRIRKKTQEHTMQFGREVPQSEKQRDHVFWHFYGFDPKTYDTVEFKDITA
NFSVHQDAQSMDLQKAFSEMVDNRWNDEDFWDDKQPKQIMAYFRKGDRVREVPMAPHKPN
QVNKRSLPVGYAAHRGEWRQSKPSVEREVSYENKSLYEGARSLNHIHQNQVILVEDNQQL
NGLIVGNILLAPFHFTRGMRDREEKEARMLTQFGTYNLGKLTDKHVTKFTMLDLVALTLP
PTFQARRKLKCFRIPVEGERAILVTMHFDKTGWVGKQSAETPITPYGDRHDGLWKHRVTT
APGDCGSTIVAVSDLKIVGFHNLGGKGENYFTPITEEIMNFLSDKSVEPLVPWKFSEEQV
DLCGLVEANGADKFPFAKTISELVNWQSLQMPKYCGENFKAIAYAPNRMSKRHVVTGRRP
EFIGFLDSHPKWKATVARHLGEFQPSVLTHEAYYKDVLKYNKDIMVGTAHEMCFAKAVLA
TVYILEIAGFEKGMCKPIYDGCKIYNDLNLDAAMGALYTGKKSAHFMDATADDIEEFFVN
SAGKLLGNGHGVWSGLLKAELRPKAKVVANKTRTFTSAPVDILMGAKAVVDEFNKFFYTK
HLRGPWTVGINKFNCGWNLLAESLMVHEWFIDADGSQFDSSITPLLMNAVLNIRQYFMAD
EEEAQTMLANLYTHIINTCILIEDGTIVQKFRGNNSGQPSTVVDNTLCLIMAMEYCRLRV
LDEHKHDMTILYVCNGDDLLINANTKDRDFVQQYYSGYMKELELNYSFDEAYRSIEQVEY
MSHTFKKRGAKFIPKLKRERIVAILEWQRSKEPKAIQSAIIAAYVEAFGYDDLTEMIEEL
AAEVSITWPEFKLPARKEVEDLYLTGNRTDLGEEIKECGEKYCVYESSAAASDDVLAAAN
TGTQTNQGGGTVAPAANAGTAAKDGSSGSGTAQTQLSDGSTMSGLDKGKNVVGQGQGSKG
NTGSFTNNPVRVGGKAQDVKDQTPGLVFPDPKVTTKAIYIPRVVRDKVKPEMINNMIKYQ
PRVELIDNRYATLEQLTTWMTEAAAGLDVTEDVFVNVLLPGWVYHCIVNTTSPENKALGT
WRVVNNAGQDGEKQLEYKIEPMYKSARPSMRSIMRHFGEGARVMIEESVRIGRPIIPRGF
DKAGVLSVNNIVAACDFIMRNADDTPNFVQVQNSVAVNRLRGIQNKLFAQARLSAGTNED
NSRHDADDVRENTHSFAGVNALA
NT seq
9072 nt
NT seq
+upstream
nt +downstream
nt
atggagcactcgaagtgtgttctcgacggattcggcaagcagggggtcatcgctaatgac
ccgtacgtccggtgcgaagcgcgcacgctgctattcctcagcaccgaagaggaggttgac
attgtggtcaaccaccacggatcaggtagcattttctggtccaaggatggagttagaaca
caaacaagcaagaatctgtacaaggctatgtcacttggactaggctacgacctcgcagcc
gatgtctttgtgtgtggcatgtgcagatcaagctgtgcacactaccggtacttcattgaa
gatcatttcgcttgcgaaaaactggtagaaaagaattgtgcatacatcaagaatgaacga
ttcaccaaggtggtggacgcgttcccgatcatgcctgcgtatgcaactccagccatggaa
acggcaacactgcagtggatgagcgaaacaagcagttgtttagctgactattgctttcaa
aaaccgcgagttgtgcatttccataatgagaaaacgaatcaggatgaaactcgggagaag
acggtgactattgaagtcaccaaggatgactttgaagaagaatacacggtcatcaaacat
gcgcataggaagaacccgatacatgaatataaggaaaaacaattgcgcatgacatcaggc
aacatcgcagcgctaattgaccaagtggctcgcataatgaaatcgcaaggtaaaactttt
gagatagtaggagcacgtgggcagaagcgcttcgtcaaaatcccactgaagcacacacta
ggttacccgaagcgtgaatgggacccactcaaggacgttccagaaaattgtcgcaatttt
ctgacgacatacagtgagattactcagtggacacggaacgtctatgaccatgaagtcact
catggttggagtggcattgtcctgagcaagatggacgtcccgcagggatacgaacaagaa
tgcgtcgatggattgttcgtagtaatggggcggtgtgctcatggcagattgcagaatgca
ttgcgaccaacatgcacacacgggcttcgctggtactcagacaaatgggtgaatgcacac
attccaaggaatcatgatcactgcaacgaggcattgaaggacaccgtggaaggcactccc
gacaaaatgcgccaggtcttgaagacaatgtttgatatgcatgatttaagatgctcacta
tgtaggctggaatggcgaaataggtcacacgatgagcaccaggagcttttgtatccacaa
gtgacagattatatgaacaaaaacccgaaaaacaagttgacattgtttcgaacgttcgca
gattacatggttggaaaagagcaaccagatgaaaggcaattgaggccgaatgaaggattg
caactggttgatgtttggcgaacaataaagcaaacaattcacattccaaatagaattgtt
tacatgggtatgttcacagacagttatggaaactttgatttctttccaaacacatccatg
ccagaattgtttccaaggtttatgaagccagtcacacacagactaaaggagaatgggaac
attgtcacaagctttagatacgtggacgctgaagaaataatacagactagcattgagagt
ctgtatccacattttgaaagcacgtattggaatgcccaggcaagggctgttcatcgcgca
caacctttgcacgaatgttccatggagatcaacggagagaccaaagtcgtatgtcattgg
gaaggtaacacaccattgtacaatcccatcatacgagcaactcctggacaacttcccttt
ggtgtggtgaatcacctgttgagtataggtgatcggaatggaaggcaccaatatgtacca
gaaaatgggtattgttatatgtacatatttgcgtgtgctatgatattctgtggaaatagt
aacagatcaactgttgacaggttcgtcaaccaggtttgcaatgatttgggaccgtggcca
aaattctctgaagttctgcggcaactgaactggatggcaacattttatgggtgctacgat
gcattggttccggtaattttagttgaccacattaataagaccatgcatgtgccaacacca
tatggaattaagcaatcgggcatgcacacgattagagttaacacagtgcttgagttgatc
tcactcgacacaatggctgatggagccatgaaagattacaagattggaggattccaggaa
actgtgttgagtattcaagcctgcgttaaaagccggaaggaatttgtgcggaaactgaat
aaggatgctgagtggttagtcgacatgttcgttaatccgtcaactttattcgcactgggt
ggcttaatcgaagttcatcaactcatacttgctgacgtggagaattcatttgacaaatca
gcggcattgttgaacttaaggcaaatggccatgaagttagggccgcacttggaatcaaag
cagcgagttcgccagtacatggaactcatgattcagcatcgagcatccgtggaggccatc
ataccatcaacgcatatgagggaggaaatcaaagcttacattgactctctccaacggtca
gtgcttgaagagcagtgcctaatagaaatggatagagttggaggcaaggaaaaaatgctc
gtcgagcaagacatttcacacggcgagtgtgcgtacaacgagttcttcaactccattggc
tacttaaactttcatggcaccgtgttacgacttacctattctggtccaggaagaaaggtt
ggagaaatgtgcgaaagtttaaagaacaattggttgacacgttatctccgaggaccgaaa
gtgccagaaggttgcaaagagagttccttgaggacctggaggaaggttactcacctcttc
ggcgaagcttacaaatgggccttctgcacaatggcagccaacgtcttgcaagttatactc
ataggcctttccaccgtttttggagcctacttactaaggaaaattctcaaaatgctgcgt
tgggaaaaggaacaagagagcaaggagctagttgagtaccagagcaagaaagaagaggcg
tggattactaggacaatggcagttttgtacataatctcatcattgttctcagttgaattt
agttcagctctgtattctaatctagttaaattcaggacaatttttgacatcctcaaggtc
aactgtgaatatcagagtggaatctttgacagcctcaaaaaccagctgggagacatacca
acattccacgaaattcagctgtatgaccatgaagctacacatgttgcggtgcctccagca
atcttaacgtttgagaagtggttcgaaactcgcattgtctcagggcagcaaggatatgca
ccacttgatggcaatcacgtgcagctaacaatgacgaaggaaacgattggagatatagca
actcaagtccaagcaagcaagtcaactgagtttcttataattggacacgttgggtgtggc
aaatcgacggcgttcccagcaactttagcacgcaatgggcgagtcatgatatgcgaacca
acccgagtgttagtaaccaacttgcaagattccatgctcgccactaagaacatcagcata
agtgcaatgatgcggaaccatcgtgtcatgacagcttcaaatatcactgtgacaacgtat
gggtatgcattgcattacttatacaacaattcccacaatctggcggagtacgagtatatc
ctgtttgatgaagtccaccaaacatcagctgaaatgttagtcttatacaactggttgaag
agcactgcgtggaatgggaaactcgtgaagctgacagccacaaataacaccgtgaatggt
gacatgcaaacgcagcaagggcttgatgtgaagacatggccagtcatggatcataggtcc
ttcatgcaggaacaagggcgtgggacggcacatgatgcatcaacactcggagatgtaata
atagttttcttaacgtcctttcgagagattgatgaatcagcagatattttatgtaagaat
ccaaagcttggagttctgaaagctgatagccggcacttacgcaacaaagtgagtctgatg
gatgacattgaagctatgcgctctgagaagaaatatatcttagcaacaaacatcctccag
aacggagttaatattcatgcggacgttgtcgtagattttgggttcaagatcgttccaagc
atcgacagtgacaatcgaatgatcacagttaagcgacaactcatcaacaagtcagatcga
attcagcgattgggacgtgttggacgaatgaagatgggatatgcgaggaagattggaaat
gacatagatgcctcattcgcattagatgaggtcacagcaactgaagcagcacttttagcc
tttggtttaggggttgcaccagtgctccaaggcgttgaccagcatacgttcggaaagatc
acagcggagcaggtgcgtacagcagctagatttgagatgcaactatcgtacatggtgtgg
atggttaacagagacggtaccatagccactcgcttgtatgaattgttcaagccgttgtta
ctcacaccaggaaacacacatctagcaccctactacgaatccttggtggaaacgcatcgt
ttccggacaataggccagtactcatcacttggatacatacgcacagatgaacaccatggg
ttaattctcccatttcaccataacgatgtaagtgttgagtttgcagtgcgtattggtgaa
gcatacatgacatcacaggttccaaattctattaagttgcgtgttccagcagtcaaccac
cgagaggtagctatgaagatgtcagcaaatccaaatgaagtgggctcaattttgtacgtt
gttgagcaagcccttgtgaatgaaaagactaaattggaaaatctgacgcaatcgtatcaa
cagcaacaatctgcctactgcaatgtgtttttgccaaatttcaatgtagcaggacgactc
actcaagcaatggatcggatcagacagaatgtagcagtgcttcaacaccagaagacagct
cttgaaaaagctgttgtcacatatgactacacaaaacttgttgaattgcttgatgaaaat
ccaagcatagcatcccatgtttcataccaagctggtccatcgcaatttgtggacgactac
atacttcaaaagagaaactatggatggatgccatacttagctttgggaactgcttgtaca
ctggccgggacagctttggttatgatgtactacagacgcatgaagcatcgggtgaaatat
gaaggtaaagcggcacgaaatcagcaagcaaagaggcaggctgcacgcgacagaaaggtg
gaccgaggtagtgagtacacatactatgatggtggtgacacattgtatgatggggtgcag
gagtatacaaacaattcgcctgattggacagatcgcattaggaagaaaacgcaagaacac
acaatgcaatttggaagggaagttcctcagagcgagaagcagagagaccatgtgttctgg
cacttctatggctttgatcctaagacgtacgacacggtggaattcaaggatattactgca
aacttttcggtgcaccaagatgcacagtcaatggatttacagaaagcattttctgagatg
gttgacaatagatggaatgatgaggacttctgggatgacaagcagcccaagcagatcatg
gcgtacttccgcaaaggcgatagggtccgcgaagttccaatggcgccacacaaaccaaac
caagtcaacaagcgcagcctcccagtaggctatgctgcacacagaggagagtggcgacag
tcaaagccatcagtagagagggaagtgtcatatgagaataagtcgctatacgaaggagca
aggtccttgaaccacatccaccaaaaccaagtgattctcgtggaagataatcaacagctt
aatgggctaattgttggaaacattctgctggctccattccactttacgcgtggcatgcgt
gatagagaagaaaaggaagcacgaatgttaacacaatttggcacatataatcttggtaag
ctcacagacaagcatgtcacgaaattcacaatgctagacttggttgcactcaccttacca
ccaacgtttcaagcaaggcgaaagctcaagtgcttccggataccagtggaaggagaacgt
gcaattttagtgactatgcattttgacaaaacaggatgggtagggaagcaatcagcggag
acaccaattacaccatatggcgaccgacacgatggactttggaaacaccgcgtcacaaca
gctccaggggactgtggtagcaccattgtagcagtctcagatttgaaaattgttggattt
cacaacttaggaggcaaaggcgaaaactacttcacacctataaccgaggaaatcatgaat
tttctgagtgacaagtcagtcgaaccactagtgccttggaaattctcagaagagcaagtg
gatttgtgtgggctagttgaagccaatggcgccgacaaattcccttttgccaagactatc
agtgaattggttaactggcaaagtctccaaatgccaaagtattgtggtgagaatttcaag
gcaattgcttatgcaccaaatagaatgtcaaagcgccatgtggtgacagggaggagacct
gagttcatcgggttcctggattcacacccaaagtggaaagcaaccgttgctcgccactta
ggggaatttcaaccctccgtgctaacacatgaggcttactataaggatgtgctaaagtac
aacaaggacattatggtaggcactgctcacgaaatgtgctttgcaaaagctgtgttggca
actgtgtacatcttagaaatagctgggttcgaaaaggggatgtgcaagccgatatatgat
ggttgtaaaatttacaacgatctcaacttggatgcagctatgggagctctgtacactggc
aagaaatcagcacacttcatggacgccactgcagacgacatcgaggaattcttcgtgaac
agtgctggtaaactgttgggaaatggacatggcgtgtggtcaggattgctgaaagctgag
ctcagaccgaaagcaaaagtggtggcaaacaagacgcgcactttcacttcagcaccagtt
gatattctaatgggagccaaggcggtcgtggatgagttcaataaatttttctatacgaaa
cacctccgaggcccgtggactgttgggattaacaaattcaactgtggatggaatcttctg
gcagagagcctgatggtgcatgagtggtttatcgatgcagacgggtcgcaatttgatagc
tcgataacaccactccttatgaatgctgttctgaacatcagacaatatttcatggcggac
gaagaagaggcccaaacgatgcttgcaaacctgtacacgcacatcataaacacatgcata
ctcatagaagatggcacaattgtacagaaattcagaggcaacaacagtggtcagccgagt
actgttgtcgataatacgctgtgcctaatcatggcaatggaatactgcagattacgagtg
ctagatgaacacaaacacgatatgacaattctgtatgtttgtaatggcgatgatctcttg
atcaatgcaaataccaaagatcgtgattttgttcagcagtattacagtggctacatgaaa
gaactcgaactcaactattcattcgacgaggcgtacaggtcgattgagcaagtggagtac
atgtcgcacacattcaagaaacgaggcgctaaattcattcccaagctcaagcgtgagcgc
attgtagcaattcttgaatggcagaggagcaaggaaccaaaggcaatccaaagtgcaata
atagcagcatatgtcgaagcatttggatatgatgacctcactgaaatgattgaggaactt
gcagctgaggtctcaatcacatggccagagtttaagctaccagcacgtaaagaggttgag
gatctgtatctcactggtaaccgaaccgatttgggtgaggaaatcaaggagtgcggtgaa
aaatactgcgtgtacgaatctagtgcagcagcttccgacgacgtgttagcagcagcaaac
actggcacacagacgaaccaaggtggaggaacagttgcaccagctgctaatgcagggacc
gccgctaaagatggatccagcgggtcaggaacagcacaaacgcagctgagcgacggctcc
acaatgtcgggtttggacaaaggcaagaatgtggtcggacaaggccaaggatcaaaaggc
aacactggctctttcacaaataacccagttcgagttggaggaaaagcacaagacgtgaaa
gatcaaacaccagggttagtttttccagatccgaaagtcacaacgaaagctatctacata
ccaagggtcgtccgagataaggtgaaacctgaaatgatcaataatatgatcaagtaccag
ccacgagttgagctcattgataatcgttacgccacgctcgagcaattgacaacgtggatg
acggaggcggcggctggtcttgacgtaacggaggacgtctttgtgaatgtgttactacca
ggatgggtgtaccactgcatcgttaacacaactagcccggaaaacaaagcactggggacg
tggcgagttgtgaataacgctgggcaggatggtgaaaaacagctggagtacaaaattgaa
cctatgtacaaatcggcaaggccatcaatgcgctcaataatgcgacactttggagaaggt
gctcgagtgatgattgaagagagcgtacggattggaaggccaattataccaagagggttc
gacaaagctggtgtgttaagcgtcaataacattgtggccgcgtgtgattttatcatgcgc
aatgcagacgacacaccaaacttcgtgcaagtgcaaaacagtgtggcagtcaacagactg
agaggcatacaaaacaagttatttgcacaagcgcgactgagtgcgggtaccaacgaagac
aactccaggcatgatgcagatgatgtcagggagaacacgcacagcttcgccggtgtgaac
gctcttgcgtaa
DBGET
integrated database retrieval system
