KEGG   Viruses: 2652924
Entry
2652924           CDS       T40000                                 
Symbol
26S_mRNA, VEEVgp3
Name
(RefSeq) Venezuelan equine encephalitis virus; structural polyprotein precursor
  KO
K19288  Alphavirus structral polyprotein
Virus
11036  Venezuelan equine encephalitis virus
SSDB
Motif
Pfam: Alpha_E1_glycop Alpha_E2_glycop Peptidase_S3 Alpha_E3_glycop
Other DBs
NCBI-GeneID: 2652924
NCBI-ProteinID: NP_040824
RS: NC_001449
UniProt: P36332 Q52QV9 M1KAM9
LinkDB
Position
NC_001449:7562..11329
AA seq 1255 aa
MFPFQPMYPMQPMPYRNPFAAPRRPWFPRTDPFLAMQVQELTRSMANLTFKQRRDAPPEG
PPAKKPKREAPQKQKGGGQGKKKKNQGKKKAKTGPPNPKAQSGNKKKPNKKPGKRQRMVM
KLESDKTFPIMLEGKINGYACVVGGKLFRPMHVEGKIDNDVLAALKTKKASKYDLEYADV
PQNMRADTFKYTHEKPQGYYSWHHGAVQYENGRFTVPKGVGAKGDSGRPILDNQGRVVAI
VLGGVNEGSRTALSVVMWNEKGVTVKYTPENCEQWSLVTTMCLLANVTFPCAEPPICYDR
KPAETLAMLSVNVDNPGYDELLEAAVKCPGRKRRSTEELFKEYKLTRPYMARCIRCAVGS
CHSPIAIEAVKSDGHDGYVRLQTSSQYGLDSSGNLKGRTMRYDMHGTIEEIPLHQVSLHT
SRPCHIVDGHGYFLLARCPAGDSITMEFKKGSVTHSCSVPYEVKFNPVGRELYTHPPEHG
AEQACQVYAHDAQNRGAYVEMHLPGSEVDSSLISLSGSSVTVTPPVGTSALVKCKCGGTK
ISETINKAKQFSQCTKKEQCRAYRLQNDKWVYNSDKLPKAAGATLKGKLHVPFLLADGKC
TVPLAPEPMITFGFRSVSLKLHPKNPTYLTTRQLADEPHYTHELISEPAVRNFTVTEKGW
EFVWGNHPPKRFWAQETAPGNPHGLPHEVITHYYHRYPMSTILGLSICAAIVTVSVAAST
WLFCKSRVSCLTPYRLTPNARMPLCLAVLCCARTARAETTWESLDHLWNNNQQMFWIQLL
IPLAALIVVTRLLKCVCCVVPFLVVAGAAGAGAYEHATTMPSQAGISYNTIVNRAGYAPL
PISITPTKIKLIPTVNLEYVTCHYKTGMDSPAIKCCGSQECTPTNRPDEQCKVFTGVYPF
MWGGAYCFCDTENTQVSKAYVMKSDDCLADHAEAYKAHTASVQAFLNITVGEHSIVTTVY
VNGETPVNFNGVKLTAGPLSTAWTPFDRKIVQYAGEIYNYDFPEYGAGQPGAFGDIQSRT
VSSSDLYANTNLVLQRPKAGAIHVPYTQAPSGFEQWKKDKAPSLKFTAPFGCEIYTNPIR
AENCAVGSIPLAFDIPDALFTRVSETPTLSAAECTLNECVYSSDFGGIATVKYSASKSGK
CAVHVPSGTATLKEAAVELTEQGSATIHFSTANIHPEFRLQICTSYVTCKGDCHPPKDHI
VTHPQYHAQTFTAAVSKTAWTWLTSLLGGSAVIIIIGLVLATIVAMYVLTNQKHN
NT seq 3768 nt   +upstreamnt  +downstreamnt
atgttcccgttccaaccaatgtatccgatgcagccaatgccctatcgtaacccgttcgcg
gccccgcgcaggccctggttccccagaaccgacccttttctggcgatgcaggtgcaggaa
ttaacccgctcgatggctaacctgacgttcaagcaacgccgggacgcgccacctgagggg
ccacctgctaagaaacctaagagggaggccccgcaaaagcaaaaagggggaggccaaggg
aagaagaagaagaaccaggggaagaagaaggccaagacggggccgcctaatccgaaggca
cagagtggaaacaagaagaagcccaacaagaaaccaggcaagagacagcgcatggtcatg
aaattggaatctgacaagacattcccaattatgctggaagggaagattaacggctacgct
tgcgtggtcggagggaagttattcaggccgatgcacgtggaaggcaagatcgacaacgac
gttctggccgcacttaagacgaagaaagcatccaaatatgatcttgagtatgcagatgtg
ccacagaacatgcgggccgatacattcaagtacacccatgagaagccccaaggctattac
agctggcatcatggagcagtccaatatgaaaatgggcgtttcacggtgccaaaaggagtt
ggggccaagggagacagcggaagacccattctggataatcagggacgggtggtcgctatt
gtgctgggaggtgtgaatgaaggatctaggacagccctttcagtcgtcatgtggaacgag
aagggagtaactgtgaagtatactccggagaactgcgagcaatggtcactagtgaccact
atgtgcctgctcgccaatgtgacgttcccatgtgccgaaccaccaatttgctacgacaga
aaaccagcagagactttggccatgctcagcgttaacgttgacaacccgggctacgatgag
ctgctggaagcagctgttaagtgccccggaagaaaaaggagatctaccgaggagctgttt
aaggagtataagctaacgcgcccttacatggccagatgcatcagatgtgccgttgggagc
tgccatagtccaatagcaattgaggcagtgaagagcgacgggcacgacggctatgttaga
cttcagacttcctcgcagtatggcctggattcctctggcaacttaaagggaaggactatg
cggtatgatatgcacgggaccattgaagagataccactacatcaagtgtcactccacaca
tctcgcccgtgtcacattgtggatgggcatggttattttctgcttgctaggtgcccggca
ggggactccatcaccatggaatttaagaaaggttcagtcacacactcctgctcagtgccg
tatgaagtgaaatttaatcctgtaggcagagaactctacactcatccaccagaacacgga
gcagagcaagcgtgccaagtctacgcgcacgatgcacagaacagaggagcttatgtcgag
atgcacctcccgggctcagaagtggacagcagtttgatttccttgagcggcagttcagtc
accgtgacacctcctgtcgggactagcgccttggtgaaatgcaagtgcggcggcacaaag
atctccgaaaccatcaacaaggcaaaacagttcagccagtgcacaaagaaggagcagtgc
agagcatatcgactgcagaatgacaagtgggtgtataattctgacaaactgcccaaagca
gcgggagccaccctaaaaggaaaactacacgtcccgttcttgctggcagacggcaaatgc
accgtgcctctagcaccggaacctatgataaccttcggtttccgatcagtgtcactgaaa
ctgcaccctaagaatcccacatatctgaccactcgccaacttgctgatgagcctcattac
acgcacgagctcatatctgaaccagctgttaggaattttaccgtcactgaaaaggggtgg
gagtttgtatggggaaaccatccgccgaaaaggttttgggcacaggaaacagcacccgga
aatccacatgggctgccacatgaggtgataactcattattaccacagataccctatgtcc
accatcctgggtttgtcaatttgcgccgccattgtaaccgtttccgttgcagcgtccacc
tggctgttttgcaaatccagagtttcgtgcctaactccttaccggctaacacctaacgcc
aggatgccgctttgcctggccgtgctttgctgcgcccgcactgcccgggccgagaccacc
tgggagtccttggatcacctatggaacaataaccaacagatgttctggattcaattgctg
atccctctggccgccttgattgtagtgactcgcctgctcaagtgcgtgtgctgtgtagtg
ccttttttagtcgtggccggcgccgcaggcgccggcgcctacgagcacgcgaccacgatg
ccgagccaagcgggaatctcgtataacaccatagtcaacagagcaggctacgcgccactc
cctatcagcataacaccaacaaagatcaagctgatacccacagtgaacttggagtacgtc
acctgccactacaaaacaggaatggattcaccagccatcaaatgctgcggatctcaggaa
tgtactccaactaacaggcctgatgaacagtgcaaagtcttcacaggggtttacccgttc
atgtggggaggtgcatattgcttttgcgacactgagaatactcaggtcagcaaggcctac
gtaatgaaatctgacgactgccttgcggatcatgctgaagcatacaaagcgcacacagcc
tcagtgcaggcgttcctcaacatcacagtgggggaacactctattgtgaccaccgtgtat
gtgaatggagaaactcctgtgaacttcaatggggtcaaactaactgcaggtccactttcc
acagcttggacaccctttgacagaaaaatcgtgcagtatgccggggagatctataattac
gattttcctgagtatggggcaggacaaccaggagcatttggagacatacaatccagaaca
gtctcaagctcagatctgtatgccaataccaacctagtgctgcagagacccaaagcagga
gcgatccatgtgccatacactcaggcaccatcgggttttgagcaatggaagaaagataaa
gctccgtcattgaaattcaccgcccctttcggatgcgaaatatatacaaaccccattcgc
gccgaaaattgtgctgtagggtcaattccattagcctttgacattcccgacgccttgttc
accagggtgtcagaaacaccgacactttcagcggccgaatgcactcttaacgagtgcgtg
tattcatccgactttggcgggatcgccacggtcaagtattcggccagcaagtcaggcaag
tgcgcagtccatgtgccatcagggactgctaccctaaaagaagcagcagtcgagctaacc
gagcaagggtcggcgaccattcatttctcgaccgcaaatatccacccggagttcaggctc
caaatatgcacatcatatgtcacgtgcaaaggtgattgtcaccccccgaaagaccacatt
gtgacacacccccagtatcacgcccaaacatttacagccgcggtgtcaaaaaccgcgtgg
acgtggttaacatccctgctgggaggatcggccgtaattattataattggcttagtgctg
gctactattgtggccatgtacgtgctgaccaaccagaaacataattga

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