KEGG   Viruses: 26795851
Entry
26795851          CDS       T40000                                 
Symbol
RNA_pol, AXI86_gp1
Name
(RefSeq) Arrabida virus; RNA-dependent RNA polymerase
  KO
K26694  Phenuiviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-]
Virus
1457322  Arrabida virus
SSDB
Motif
Pfam: Bunya_RdRp L_protein_N L_PA-C-like WH_RGF3
Other DBs
NCBI-GeneID: 26795851
NCBI-ProteinID: YP_009224693
RS: NC_029082
UniProt: A0A0X9U1N4
LinkDB
Position
NC_029082:12..6299
AA seq 2095 aa
MERILRKQPNPEGSLTIHQLRRYESTIYDSPIPAYVIKHSSEGVAIDIATAELADGQSGS
TIQPFETIPAQNLTLFKHDYTFGHLADTTDRRFVEVFGVLENRADDADFLTPDMIIESET
GHVYVVEFTTTMGDVNSADLAARNKIAKYEIACLNRSAIKPISLYVIAVHFNGVVSNLEL
SDDDVNEIVFRFRLARDIFEELREINPTLFDSDETISRLDREVNSIMSSIKIDWKVTEAK
FPSFRKLLFDRFNQMEADNDYIARIVKKCTDEAIKGIEKDNYYTDDISNDERMQKNSHTA
TAEINNKIAEMISYEFLRDPNDHKSTVQFPSWITREGSPGKGLEPLKSVSVEGSHPMSRI
WAKVCTNATIEKIDRMNDDPVQELEYAMSGSTERSVERNKYHRTVLTLSQDEREYAAVLG
VCGKKNSSLGAVKEARIRSKKGFSIEHDISRVSDFLSSDDMSTLVPSDGLYNPLSKDFNL
RKLAMGLHQPTLVHADGLTPETLSCHMDLLSTPVGSWLQMVSLIGAELSASVKQHVKPNQ
FIVKRLMDSGIYLLIKPTTSKGHIFVSLAVDKKVLAGELDNSGIFKPGIDSGDMVVTDFV
SFKLSKITNLCKAASVMEASICFWAECYGYEPWKFLKHVEERRFKEAWFMMKLSLLTMLE
DKATTEELQTMQRYVVMEGFVSLPEIPRPQKMLSKVPKVLRSELQVFLAQRLFSAIQRIA
RQPFALHKMGSTIRWKGMFNPFSGDPIDELQILISCCYNGYFKNKEEESEPSALSAMYKK
IIELEHLRPLDDLYLGYNDPEQPKMHEFSRSYLKILCDHAKAKLRRQYGRGVMTQIENSI
IREVSSITLERLATLKATSNFNDGWYVYKEVKDKNYTRDKLLVKMTKFAHRGKTLAIEMF
DECMNRIEEKGCMEICLFKKQQHGGLREIYVMGADERIVQSVIEAIARAIGRFFDSDTLC
NPTNKMRIPETHGQRAKKRCGRSVWTCATSDDARKWNQGHFVTKFALMLCQFTPEEWWPL
IIRGCSMFTNKFMMMNLDFLRIIDSHKELNVEDDFVTKLFKAYHGETTEPWIEQGRTYLK
TSTGMMQGILHFTSSLLHSLHQEFIRTASLQLFTQRMGSDAASKVVCDMMQGSDDSSMII
SFPADNERMRMRYKLVAAMCFRIKKSLGVYAGIYPSEKSTSNTDFVMEYNSEFFFHSQHV
RPTVRWIAASCSLPEVETLVARQEEAANLLTSITEGGGSFSLAAMVQQSQCTIHYMLMGL
GVSALFGEFEKAISKWLDPGLGFFLFDNPYSAGLSGFKYNLYRAILGSSLKSVYSFFMKR
VKGSSEKADGIISESCSVSPGGAIVMSSTLRWGSVEKFKKLRNRLNIPEDWREMINESPE
VLYRAPQTGTEIMLRIAEKVHSPGVVSSLSTGNAVCKVMASSVYFLSACIFEDAGNQEYK
VMNSDKYSLLQKIIAFNQFEESDSISQEDLLFLFPNLSEFEAFDSIIYDKGSFNVVPRAS
QREATQTRIVVFEHHSSARVAPEKLVSDKWFGTRKSKIGSAGFKQEWDRLKTIVRWLRDA
PSDTLESSPFSNHVQIRNFFARMEGKPRVIKVTGAPVKKRSGMSKIAMAIRDNFCKVGYI
QGLEDEVGHSRAMQVEKIKHYLFSVLMGPYTESAKLEYIVRILSEEPQVVLNYNDKRSRA
NTISLLQKFIKNDVGIAALIEDMKAGIFGAFTKVQQFSQSSINHKYYGKGIWKGVMDGYQ
LQIEVDGKEGMPSYLSSITISNCSKPWVLTQSLKAWCEDMQVSNSTDLSKSHKNANYWIY
GFKMYGSSYPYGCPIYIVRGDITDLGLLHDDDIDIKVRRNTVNLYVRSKDKRPRDLHILS
YTPSDSDISSVSSKHIMEDEFFVYKGLFSVEPTRSWMLCQPLPWKFVRPVVQLASGQRTA
PKQIDTTRLREIIRLCTESSIRNKIGTVYSQTRPESLIESEPIDMSDMFDMMIEEGMDET
FEDLADFLTVDEDPDYMAEVDFDEESLNLFGPAHYKELQSLTILAHPLMDGFVTRLVTRF
GRAKIRRLLEKSIITSDCREVAELLFLALERDPSQIKDELIQGDSPTDVPDDLLG
NT seq 6288 nt   +upstreamnt  +downstreamnt
atggaaagaatcctgagaaaacaaccaaatcctgaggggagcttaacaattcatcagttg
agacgttacgagtctacgatctatgattccccaatccctgcctatgttattaagcatagc
tcagaaggggtggcgatagacatagcaacagcagagttggcagatggccagtctggttct
accatccagccctttgagacaataccagcccaaaacctcactttgtttaagcatgattat
acttttggccatcttgctgacacgactgacagaagatttgtggaggtttttggtgttctt
gagaatagagctgatgatgctgacttcttgactcctgacatgattattgaatcagagact
ggtcacgtttatgtggtggagttcaccaccacaatgggtgatgtcaactcagccgatctt
gcagctaggaataagatagcaaagtatgagattgcctgtctaaataggtcagcaataaag
ccaatatctctgtatgttattgcagtgcattttaatggagtggtttccaatctggagctg
tcagatgacgatgtgaatgagattgtttttcgatttagacttgccagggacatctttgag
gaactaagagaaattaacccaactctatttgattccgacgaaactattagcaggcttgac
agggaagttaatagcataatgtcatcgattaaaattgattggaaagtgactgaggcaaag
ttcccaagcttcagaaaacttctatttgataggttcaaccaaatggaagcagataatgat
tacattgcaagaattgtgaagaagtgcacagatgaggccataaaaggcattgaaaaggac
aattactatactgacgacatatcaaatgatgagagaatgcagaaaaattcacacactgca
acagcagaaatcaacaacaagattgccgagatgatcagctatgagtttcttagagatccc
aatgaccataagtcaacagttcagtttccctcatggatcacccgtgaaggatcacctggg
aaaggtctagaacctttgaaatctgtcagtgtggaaggctctcatcctatgagtagaata
tgggccaaggtctgcaccaacgccacaattgagaagatagacaggatgaatgatgatcct
gtacaggaattggagtatgccatgtctgggagcacagaaagatctgttgagaggaacaaa
tatcacagaacagtgttaaccttaagccaggatgagagggaatatgcagcagtattaggg
gtgtgtgggaagaagaactcatctcttggagctgttaaggaagccaggataaggagcaaa
aagggattttcaatagagcatgacattagcagagtttctgacttcttgagctctgatgat
atgtctactttggtgccatcagatgggttatataatccactaagtaaagacttcaacctg
agaaagctagcaatgggactacaccagccaacccttgtccatgcagatggacttacacca
gaaacactttcctgtcatatggacctactgagtacaccagttgggagctggttgcaaatg
gtttcgctgattggtgcagagctatctgcttcagtgaaacagcatgtcaagccaaaccaa
ttcattgtcaagaggcttatggattcaggtatctacttactgatcaagccaactacttct
aaaggtcacatatttgtctccttggctgttgacaaaaaagtccttgctggagagctggac
aactcaggaatatttaagccaggaattgattcaggggacatggttgtcactgactttgtt
tctttcaaactgagcaagataactaatctctgtaaggctgcgtcggttatggaagcatca
atctgcttctgggctgagtgttatggatatgagccatggaagttcttgaagcatgtggag
gaaagaagatttaaggaggcatggttcatgatgaagctgtcgctactcaccatgctggaa
gacaaagctaccacagaagaactgcagacgatgcagagatatgtggtcatggaaggcttt
gtgtctctaccagagattcctcgtccacagaagatgctatccaaagtgcccaaagtgctg
aggtcagaactacaagtattccttgcacagagacttttctcagccattcagcgcattgca
agacagccttttgctcttcacaagatgggaagcacaataagatggaaagggatgtttaat
cctttctcgggagacccaattgatgagttgcagatactcatcagctgctgttacaatggt
tattttaaaaataaagaagaagaatcagaaccgtcagccttgtcagcaatgtacaagaaa
atcatagagcttgaacacttaagaccactggacgacctgtacctagggtacaatgatcca
gagcagcccaaaatgcatgaattcagcaggagttatctgaagattctgtgtgaccatgca
aaagctaagctcagaaggcagtatggacgaggggtgatgacccagatagagaacagcata
ataagagaagtctcctcaatcactctcgaaaggctggctactctaaaggcaaccagtaat
tttaatgatggttggtatgtctacaaagaggtgaaggataagaactacacaagagacaaa
ctcttagtcaagatgaccaagtttgcccacagaggaaagactctagcaattgagatgttt
gatgagtgcatgaacaggattgaagaaaagggctgcatggaaatctgtctcttcaagaag
cagcagcatggaggtttgagggaaatttatgtgatgggggctgatgagagaattgtgcag
tctgtaattgaagcaatagctcgcgcaattggcagattctttgattctgacacactatgc
aaccctactaacaagatgagaataccagagactcatggtcagagagcaaaaaagaggtgt
ggaagatctgtttggacttgtgcaacatcagatgatgccaggaagtggaatcaaggtcac
tttgtcactaagtttgccttgatgctatgccagttcactccagaagagtggtggccttta
attatcagaggttgctcaatgttcaccaacaagttcatgatgatgaatttggacttccta
agaatcattgacagtcataaagagcttaatgtagaggatgactttgtcacaaagcttttc
aaagcatatcatggtgagactactgagccgtggattgaacaagggaggacttatcttaaa
acaagtactggtatgatgcaaggaattcttcattttacttcttctctgctgcactctcta
caccaagaatttataagaacagcttccctgcagctcttcacacaaaggatgggttcagat
gcagcttcaaaagttgtctgcgacatgatgcaaggctccgatgatagcagcatgataatc
agcttcccagcagataatgagaggatgagaatgcggtacaaactggttgctgcaatgtgc
ttcaggataaagaagtctcttggtgtctatgcggggatttacccatctgaaaagtcaacc
tcgaacacagactttgtaatggaatacaactcagaatttttcttccactcgcagcatgtt
aggcctacagtgagatggattgctgcatcatgctctctaccagaagtagaaactcttgtt
gccaggcaggaggaagctgcaaaccttttaacatcaataactgaagggggaggatctttc
tcacttgcagccatggtccagcaaagccagtgtactatccactacatgttgatgggtctt
ggagtgagtgctctttttggagagtttgaaaaggcaatctcaaagtggctggatccaggt
ctcggattcttcttgtttgataacccatactctgcagggctttcagggtttaaatacaac
ttgtatagagctatccttgggtcaagtcttaagtcagtatactccttctttatgaaaaga
gttaaaggttcgtcagagaaagccgatggtattatcagtgagtcctgtagtgtcagtcca
ggaggtgcaatagtgatgagttcaacactaagatggggttctgttgagaaattcaagaag
ttaaggaacaggttaaatatcccagaagattggagagaaatgattaatgagtctccggaa
gtattgtacagggcacctcagacaggaacagagataatgctacgcatagcagaaaaggtc
catagcccaggagttgtctcatctctgagcacgggcaatgcagtatgtaaggtgatggca
tcttctgtctatttcttatctgcgtgcatatttgaggatgcaggaaaccaagaatataaa
gtcatgaacagtgacaagtacagcttattgcagaagataatcgcctttaaccaatttgaa
gagagtgatagcatcagtcaggaagatctgttatttctctttccaaacctgtcagaattt
gaggctttcgattccatcatttatgataaggggagcttcaatgtggttccacgggcaagt
cagagagaggcaactcaaaccaggattgttgtgtttgagcatcattcatcagctcgtgtt
gccccagagaaattggttagtgataagtggttcggaacaaggaaaagcaagatcggctca
gcaggcttcaagcaggagtgggacagattgaaaacaattgtgaggtggctaagagatgct
ccttcagatacattggagagttctccattctctaatcatgtccaaatcagaaatttcttt
gccagaatggaaggcaaaccacgagtaatcaaagtcacaggggctccagtgaagaaaagg
tcaggaatgagtaagattgctatggcaatacgggacaacttttgtaaggttggttacatc
caaggcttagaagatgaggttggccatagcagagcaatgcaggtggagaaaattaagcat
tacttattctcagtactaatgggcccctatactgagagtgctaagctggaatacatagtg
aggattttgagtgaagagcctcaggtggtgttgaattacaatgacaagaggtcaagagca
aacacgatcagcctacttcaaaaattcatcaagaacgatgtgggtatagcagctcttata
gaagacatgaaagctgggatatttggtgccttcacgaaggtacagcaattcagtcagtca
tctattaatcataagtactatggcaaaggaatctggaaaggggtgatggatggctatcag
ctgcagatagaagtagatggaaaggaaggcatgccctcatatttgagctccataacgatc
tctaactgctcaaaaccctgggtgctgactcagagtttgaaggcatggtgtgaggacatg
caagtctccaacagtactgatctctcaaagagccacaagaatgcgaattactggatttat
ggttttaagatgtatggatcatcttatccatatgggtgtcccatctacatagttaggggt
gacatcacagaccttggcttattacatgatgatgatatagacattaaagtgagacgcaat
acagttaatctttatgtgagaagcaaagataagagacctcgtgatctgcacatcttatca
tacactccttcagattcagacataagttctgttagctcaaaacacatcatggaagatgaa
ttctttgtgtacaagggcctgttttctgttgagccaactagatcctggatgctctgtcag
ccactgccatggaagtttgttagaccagtagtgcaacttgcttctggccagagaactgca
ccaaagcagattgatactacaagactgagagaaataatcaggctgtgcacagaatcatcc
atcaggaacaagataggcacagtttatagtcagacaagaccagagagcttaattgaatca
gaaccaattgatatgagtgatatgtttgacatgatgatagaagaaggcatggatgaaact
tttgaggatctggctgatttcctcacagttgatgaagaccctgactacatggcagaggta
gactttgatgaggagagcttgaacctctttggaccagcgcattataaagaacttcagagt
ttgacgatattagcacatccattaatggatgggtttgtgaccagacttgtcacacggttt
gggagggctaagatcagaaggctattagaaaaatccatcattacctctgactgtagagag
gttgctgagttactctttttggctctggagagggatccatctcaaataaaggatgagttg
attcaaggtgatagccccactgacgttcctgacgaccttcttgggtag

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