Viruses: 27042395
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Entry
27042395 CDS
T40000
Symbol
ORF1, NoVGIII_gp1
Name
(RefSeq) Norovirus GIII; nonstructural polyprotein
Virus
340017
Norovirus GIII
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C37
Calici_PP_N
RdRP_1
RNA_helicase
nSTAND3
AAA_16
VPg
RuvB_N
AAA
Zeta_toxin
RdRP_4
AAA_5
NACHT
NTPase_1
AAA_22
AAA_33
IstB_IS21
NPHP3_N
RdRP_2
Mg_chelatase
NB-ARC
Motif
Other DBs
NCBI-GeneID:
27042395
NCBI-ProteinID:
YP_009237900
RS:
NC_029645
UniProt:
J7HDR6
LinkDB
All DBs
Position
NC_029645:22..5076
Genome browser
AA seq
1684 aa
AA seq
DB search
MDSSNVKVTGPLAAKASDPDSTFAKLKAKFSALRNPQPPDPPEAPRLETPPMAAPPLGSP
PIALPTGWEPAEPHREQADQFPVRYSRGAVDLDVHPPHVAPGPAWNGCPLPPVEQRSTEP
PAEPPVGTVLEFYEGYIFHYAIYVGNGKTIGVHSPQMALSVPKISVQNLSAWWRVAYIPR
DPPPRDQLLSLEGERWPYASVTSNCYTFCCKVLDLDDDWLSRRLVRSGPYHHPSQPWNRA
VPEFHQDGKMELVRDAILTALNALVSQPMRELINVIKPLNVLSILSHCDWTFTGIVEAAV
LLAELFGILWQPPDVASFLANLTPECVLQGPEDLAKDIIPVILGGIGLALGFTKDKATKL
LKSAADGLRAASSLGQYGIEIFNIIKKYLFGDSTGQTLKRVENAVIDLEVLASNNITEVV
RDRQSTLAYIKTLDMEEERVRELSSRSSDPHVVSSVNALLGRIAMARSALAKAQSEMSNR
VRPVVIMLSGPPGIGKTKLAERIAHQLAKAIRPGGKVGLVPREAVDHWDGYKGQEVMLWD
DYGMANIAADCNKLQAIADTAPVSLNCDQIENKGMTFTPEAIVITTNAPGPAPLDHMNLG
PVCRRVDFLVYCNSQDIENHRRQKPGDTQGLNQLFKKDFTHLQLQLAPQGGFDCLGNTPY
GKGAMSKTSLPRLLAAATALALERLEDFQLQAPEYDFDKNRVVAFSRMANDNGLGMLSAM
RVANKLKGVTSVSELEEALAGFAIAPCTIIWRGTHYELQSDGNNLTINQLATPQPTVEIN
YALKRLAAARAVTYWSLAANLVTTAIQAASSALVIHRAVQRIRAPSTQLESHNCRYHRAE
QENRTVGGVGVIGHKGMVDKYGLCESDTEMPAPQEGKEKKAQAPTQLESKKGRRKVNAFS
RRGLSDEEYDEYKKIREERGGNYSIQEYLEDRERYERELAERQADDDSYDDSSIRQKYFG
RGKAAKAQRRKIDWNPTGPSWADDEREVDYNEVIEFQAPPSIWSRIQRFGSGWGCWVSPT
LFITATHVIPEGCTEAFGVPVSEIAVSSHGEFTQFRFPRPIRPDVSGLVLEEGAPEGTVA
SVLIKRPTGELIPLAVRMSTTTSTKVQGKVINGQTGMLLTGSNAKGMDLGTLPGDCGCPY
FFKRGNDWVVFGVHAAATRSGNTIICAIPNSQESVALEGGHGTYVGHPIIGQGSAPKLST
KTKFWRSSPAQLPPGTYEPAYLGGKDPRVQGGPSLQQVMRDQLAQFSAPRGKLPRPELLK
AAVETVTNCLEQVMDQPKPWSYQDACMSLDKTTSSGYPHYKRKNDDWNGTAFIGALGEQA
NHANNMYRQGKSQRPRYTAALKDELVAPRKIYEVQKKRLLWGADLSTVIRAAMAFGPFCD
AIKEHVVELPIKIGMNAIEDGPVIYQRHSNYKYSFDADYSAWDSTQQREIMRLSLDIMTK
LTAEPELARVVAEDLLKPSHLDVGDFLVAVHEGLPSGFPCTSQVNSINHWILTLCALSEV
TNLDPDVVQANSYFSFYGDDEIVSTDLEFDPDKLTKVLKGYGLKPTRPDKAEGPIELRRQ
VDGLVFLRRTISHDAKGFQGRLDRESILRQLYWTRGPNHDDPSETLVPHSNRKVQLLCLL
GEAALHGEKFYRRVGSMVTAEAKEGGMEIFVPSHRSMFAWMRFHDLSLWEGSRDTLPDFV
NEDD
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggattcctccaacgttaaagttactggtcccctagccgctaaagctagcgatccagat
tccaccttcgccaagcttaaggcgaagttttctgccctccgcaatccacagcctcctgac
cccccggaggcaccgcggctggaaacaccccccatggccgcgcctcccctgggcagcccc
ccaatcgccctccccaccggttgggaacccgcagagccccatcgagagcaggcagatcaa
ttcccagtgcgctactcccggggcgccgttgacctcgacgtccaccccccccatgtcgcc
ccagggcccgcctggaatggctgtcccctgccaccagtcgagcagcggagcacggagcct
cctgccgagccgcctgtggggacggttctagagttttatgagggctacattttccactac
gccatctatgttggtaacgggaagacaattggcgtccactccccccagatggccctctca
gttccaaagatttcagttcagaacctctcggcctggtggcgcgtagcctacatcccacgc
gaccccccgccccgagaccagctcctgtcactcgagggcgagcgatggccgtacgcctcc
gtgactagcaattgctacaccttctgctgcaaggttctggaccttgatgacgattggttg
tcccgccggctcgtccgctcaggcccttaccaccaccccagtcagccctggaatagggcg
gtcccggagttccaccaggacggcaaaatggagctggtccgggacgccatcctaacagca
ctgaacgccctggtttcacaaccaatgcgcgaactgatcaacgtcatcaaacccctcaat
gttctgtccattctctcccattgtgactggactttcaccggcattgttgaggctgctgtc
ctattagcggaactctttggcatcttgtggcagcctccagacgtggccagctttctagcc
aacctcacaccggagtgtgttctgcagggcccagaggaccttgctaaggatatcatcccg
gtgatacttggtgggatcgggctggccctcggcttcaccaaagacaaggccacaaagctc
ctgaagtcagccgcagacggtctccgcgcggccagcagcctcggtcagtatgggatagag
atattcaacataattaagaaatacctttttggggattctactggccagacactcaagcgt
gttgagaatgccgtcatcgaccttgaagtcctcgcctcaaacaatatcacggaggtggtg
agagaccgccagtccaccctagcctacatcaaaaccctggacatggaagaggagcgggtc
cgagagctctcatcaaggtcctccgacccccatgtcgtctcctcagttaatgcgcttctc
ggcaggattgccatggctcggtccgccttggccaaggcccagtctgagatgtccaatcgg
gtgcgcccagtcgtcatcatgctcagcgggccccccggcattgggaaaaccaagttggca
gaacgcatcgcccatcaattggccaaagccatccgtccaggtggcaaggtaggcctcgtc
cctcgcgaggccgttgaccactgggacggttacaagggtcaggaagtaatgctgtgggat
gactacggcatggccaacattgccgctgactgcaacaaactccaggccattgcggacact
gccccagtctcgcttaactgtgaccagattgagaacaaaggtatgacttttactcctgag
gccatagttatcaccaccaatgcccctgggcccgcccccctagaccacatgaacctgggg
ccagtttgccggcgagtcgactttctggtctattgcaactcgcaagacattgagaaccac
cgccggcagaagcctggggacactcaaggcctaaaccagctctttaagaaggacttcacc
catcttcaactccagcttgcgcctcaaggtgggttcgactgtcttggaaacacgccttat
ggcaagggtgccatgtccaagacctcgcttccccgtctcttggcggccgcaaccgccctc
gcccttgagcggcttgaggacttccaactccaggcccctgagtacgactttgataagaac
cgtgtcgtggctttctctagaatggccaatgacaacgggcttggcatgctctcagccatg
agggtggccaacaaattgaagggcgtgacctctgtgagtgagctcgaagaggcacttgca
ggatttgccatcgccccttgcaccatcatctggcgggggacccactatgaactccaatct
gacgggaacaatttgaccatcaatcaacttgccaccccacagcccactgttgaaatcaac
tacgccctaaagcggctggctgcggctcgtgcagtgacgtactggtcacttgcagccaat
cttgtgaccactgccatccaagccgccagctctgctctcgtcatccacagggctgttcaa
cggattcgggctccgtccacccagctagagtcccacaactgccggtaccatcgggcagag
caagagaaccgcactgtcggtggcgttggagtcattggccacaagggcatggtggacaaa
tatggcctgtgcgagtctgacaccgagatgccagcccctcaagagggcaaggagaagaaa
gcccaagcccccacccagctagagtccaagaagggcaggaggaaggtcaatgccttctcc
aggcgtggcctctctgatgaagagtatgatgaatacaagaagatcagagaggagcggggt
ggcaactattctatccaggagtatcttgaggaccgcgagcgctatgaacgcgagttagct
gagcgccaggctgatgatgactcctatgatgacagttccatacgccagaagtactttggc
cgtgggaaggccgccaaggcccagaggagaaagattgattggaacccaactggtccctcc
tgggcggacgatgagcgggaggttgactacaatgaggtaatagaattccaggcccccccc
tcaatatggtcgcggatccaacgcttcggctccggctggggctgctgggtttcccccacc
ctcttcatcaccgcgacacatgtcatccctgagggttgcaccgaggcctttggggttcca
gttagtgaaattgcggtcagctcccatggtgagttcacccagttccgcttcccccgaccc
atacgaccagacgtgagtgggttggtgcttgaggagggagcccctgagggcaccgtggcc
tcagttctcatcaaacgcccgacaggtgagctcatcccccttgctgtccgcatgtcaacc
acaacaagcaccaaggttcaaggcaaggtcatcaacggtcaaaccgggatgctgctcact
ggttcaaacgctaagggtatggaccttggcacccttcctggtgactgcgggtgcccctac
tttttcaagcggggcaatgactgggtagtctttggcgtgcacgccgctgcaacgcgctcc
ggcaacacgatcatctgcgccatcccaaactcccaggagtcggtcgcgctcgagggtggg
cacggcacgtatgttggccaccccatcattggccaggggtcggcccccaagctgtcaact
aagaccaaattttggaggtcctccccggcacagctgccgccaggcacttatgagccagcc
taccttggtggaaaggaccccagggtccagggtggtccctcccttcagcaggtgatgcgg
gaccagctagcccagttctcagcgccccgcggcaagctcccccggcctgaacttctgaag
gccgccgtcgagacagtcaccaactgccttgaacaagtcatggaccaaccaaagccatgg
agctaccaggatgcctgcatgtccctggacaaaactaccagctctggctacccccattat
aagagaaagaatgacgactggaatggcactgcattcattggggcgttgggcgagcaggca
aaccacgcaaacaacatgtaccgccagggcaagagtcagcgcccccgctacacggcggcg
ctgaaggatgagctggtggcccccagaaagatctatgaagttcagaagaagcgcctgctt
tggggagctgatctctctactgtgattcgggccgccatggcctttgggcccttctgcgac
gccataaaggaacacgtggttgagctccccatcaagatcggaatgaatgccattgaggat
gggcctgtcatataccagagacactcaaactataaatattcctttgacgctgactattca
gcgtgggacagcacccagcagcgcgagatcatgcgcctgagcttagacatcatgaccaaa
ctcaccgctgagcctgagcttgctcgcgtggtcgcggaggatcttcttaaaccttcgcac
ctcgacgtgggggactttctggtagcagtgcacgaaggcctcccatcaggcttcccgtgc
acgtcccaagtcaattccatcaaccactggatcctgaccctctgtgccctttcggaagtc
acaaaccttgacccggatgtagtgcaggctaacagctacttctctttttatggtgatgat
gaaattgtgtcaaccgaccttgaatttgacccagataagcttaccaaggttctcaagggg
tacggcctgaagcccacccggccagacaaggccgaaggcccaattgagctccgtcgtcag
gttgacggcctggtcttcctccggcgcacgatctcgcacgatgccaagggattccaaggc
cgcctcgaccgggagtcgatactccgacagctctattggactcgtgggcccaatcacgac
gacccgagtgagaccctggttcctcacagcaaccggaaggtccagctgctctgcctcctt
ggcgaggcggccctccacggtgagaagttttaccgccgagttggctctatggtgactgca
gaggccaaagaggggggaatggagatctttgtgccatcacaccgctccatgtttgcttgg
atgaggtttcatgatctgtcactgtgggaaggtagtcgcgacacccttcccgattttgta
aatgaagatgactga
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integrated database retrieval system
