Viruses: 27209644
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Entry
27209644 CDS
T40000
Symbol
A4R41_sLgp1
Name
(RefSeq) Iris yellow spot virus; RNA dependent RNA polymerase
KO
K26280
Tospoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
60456
Iris yellow spot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
Motif
Other DBs
NCBI-GeneID:
27209644
NCBI-ProteinID:
YP_009241381
RS:
NC_029799
UniProt:
C0KQW8
LinkDB
All DBs
Position
NC_029799:34..8655
Genome browser
AA seq
2873 aa
AA seq
DB search
MNLQSVHSSLDITDRINVFLNDLRDKLMNLSNTVRVKYKDGLDAVSSGLKAIMNMSCIID
EITEMKSSYYQSTTSIDQKEMEQKISVFLDRYNELELMRHDLFGVLASSRLHFSPKHRHD
VVMKDCIMDYLEYCSVKEDISNRIEDLDSITSQLIFQHQTPDNYVIYKETTGEKACLMIY
DWKVSVDTMTENKTSENYYTSIWKTFKDITIDGEPFLSKFPIFVTIVILQPMNFMPIVAT
TCRVLEEMRNSPYRTFVDRRNAASRTKLISAKNLRDLGGYDGEKLTEFYAECQAFKNLLM
SSVGDYMNRTNEVFFSNWSFEYKNTTLKDNLMSHDVIDIIKSLPNKTIKKDLMVHFIFGN
YVFYYKTMSDLHRKDKFEGYKSNCKLMKVKPKETEEELKVYLENNEGLFESLYSEHMDKI
KADMILKKSQEKEIKSIEESFNINAENYQSEYPGCFTNDLQETKTNFSVCWSPSTERLSI
EDMNFNNSIIENFRKCFDDEEVLIHNRSYGGKSDQRQFSNTLFRLVKACIKDLSRNTTGQ
TKVRAEDVVDIKDGSIKISRESKEKGWKEIGHVKTRNGNEFTLSEKVNKEVKTDFFKGLT
IMNIDMGKKKKNEHKLNLINKLKESRVANEELMMKEGEYDVSSNSEVINMPLSSVSHNKK
LIRHDNPDVKYWCDSMIQSMYALHGFDIRDEKSGKINSVYSEYCNDPGEFFSKGNLIETE
VNISKNIHKVSQSLAVYSYSEDMMQLAKGLMVADRFMRKTDFKILTCANTSMICLAFKGD
GLNTGKSGVPYITLHKVPESLQPYFTSLYTKELVVSFKSGDDYVNIMRPQRLNQVRLLSL
FKSPSKVPVCFSQYCLLSKEVKRWISRKTINLMDCPSNIVPFLKNILFSSVVIGTVTKLS
RMGIFDFMRYAGFLPLSDYSNIKEYIAEKFDPDITNVVDCYFVSGIKTLLLKMEGTNLSN
SIKPLTIDQENDMSGGIKDLNIVCPITGSTLKTIECLYNNVYLAIYMMPKSLHTHIHNLT
SLLNVPAEWEVKFRTKMGFRLDEEIVPKKEMFNNSGPFSIDGALNVKTLFDYYLKTVDNV
SSTRSNIESKEDFLSTPYKIKTLASSKKCSKADIIKNSEIKQCLINCLGKDPEKLSGKDE
YVLKGVLKCFVEDKDALRNFMTLEELDESEYFHYFSSLTSGENKTLMKTSYDKFYYNSHP
ITVESFIKVRYGHMSTTTVLKSKKVSEELYDLIKEYNKITTLDLDALENLGKGLSGNKVT
FIQLLEFVLLKTRTNAGNTDFLVSVFEKMQRTKMDREIYLMSMKTKMMLYFIEHTYKHIA
QSDPSEAISISGDYKIKTLASLSYDTITNYNTSLQKGLECKMAFLSADQSKWSASDLTYK
YILAVLMNPVLTTGEINMMCECILMYVKLKRVCIPTDVFLNLKRGQNTYGSYGTAISSLT
NNLETNTFPVSMNWLQGNLNYLSSVYHSCAMLGYEKALKTNKDFEFAVRWMVHSDDNATS
VVVKGSITEFLLRFKCTNLSEFLFRSIQSHFKSYCITLNPKKSYASESEVEFISERIING
AVIPLYCRHLANCCTESSHNSYFDDLMSLSIHITMLLRKGCPNELISFAYAAIQCQALSI
YSMLPGEENDIMSIGKDVGFPLTKKEIPTCVGGWMRAPVEMLSVLGPSSNDQYIYYKILI
EFFRQKDFSTLKTQVNSLGYVTSKINELNKGIAKDELTKEDIKMICMVNLFKTSLMSEDS
DSLNIGMKFQTMMTQIIKLPSYVSEGSLMKNSSFQDFCKLFPNLKRNSDMLNSLKRVQID
EDSMDCLSEDDAMLSRIQMEELYKHMAKHPEALLIAPMNDKDYILTNLYMYSSISKRNQM
SNQSTEKLALDRILRSKAKTFIDPNSNQMMTYKENMSSKLKEIMDKSANDYKIISTISDM
MVKDMNFEMIISLIENSVANASIPKTNYNFRWFVTEKVPSVIEGSPGLIVMSAVYGMEYL
VDLGLKRMPLTESSICILHDVFGNRKTFDDVKNYLTSKSSEMKTKEFILADELKRGILSI
NYMIQSQNKLLSLNTCFSRKNFPFYSKYNLGKTFITNTLALWSTIYSRTTNINFYTNLNF
VIDRSSRLIVSLQRDMILEKLLDCCSYVSDRTQSLFPDMKIEDIRNILSKLNFNSVNLLQ
RVVSEIKPVKRAISQVKTASHVTLSYRPQLMAMSKHAAWLYNFGYINERDFKFVIEQIRQ
SEVYYIKTDELDTHGYYVSGISYKIGIKTLLNYAQLEMKNKDIAIHLNSPYEFIREEDNK
MWDTHVSSVYKLLQKLLIDKQNAIKTFLNMKVDLLPNEFCIHESSQKNLLIYINETNRVI
TLDKVKFKGKVKYNFCNDFTWSLMENNYNYMLRQAETGECFSDLYKTIDSGNSLMEKILK
NLKSSLIYSSDAENMLSTAVQGIEDEENKNIFEDSLRQIYEITYKGLKECKSSEEFEIYL
KENEFDDLVNMQKEMLETICQDLSDTDSRIQNVVDKLRVWSSSLSNFGELCVMLKFAMVN
DSKGIRTYKANGVEFHSLSSSESILCSGYDIFEMLKLIKACEACHTSNSTLNLIAFRDIK
SRKYVHPYRRKFGGSVIFNYPLKLNNDVMSRFYEHKTISLSDIQITESVREILGQNGFTV
TGSNVKLESDMLELNPVTILDDHSTFDSVSRQMRLTKKKSSYLIPANTLLLGELMKFLML
CIKGNEYDVQKMLSAHFDLSMERDDRMDSLIKTIMTLRASGYVQRYFGNTNEEEILLGVA
TSLENFMILSTPGGEFQEPFDALRLINNSFSEKEKDKKLKILLRIRSYISSKLGYLNEQC
IYKNITNLEINNLVFSSINYIDKEISELRTFDKAVYHNEFNEYLKHTEGASSD
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaaagtgtacacagctccctagatattacagatcgaattaacgtctttctg
aatgatctaagggataaactcatgaatctatccaacaccgttcgagtaaaatacaaagat
gggttagatgctgtttcttcaggtctcaaagcaatcatgaacatgtcatgtatcattgat
gaaataacagaaatgaaatcttcttattatcagagtacaacctctattgatcaaaaagaa
atggaacagaaaatatctgtcttccttgatagatacaacgagcttgaacttatgaggcac
gacctctttggggttttagcaagctctagattgcatttttctccaaaacataggcacgat
gttgttatgaaagattgcatcatggattatctagaatattgttctgtaaaagaagacatt
agcaacagaatcgaagatctagatagtataacttctcaattgatatttcagcatcaaacc
ccagacaactatgttatttacaaagagacaacaggggaaaaagcttgtttgatgatatat
gactggaaggtctctgtggacactatgacagaaaacaaaacatcagagaactactataca
agcatatggaaaacattcaaagatataacgattgatggagaaccatttctgtccaaattt
cccatatttgtaactatagttatcctgcaacctatgaacttcatgcccatagtggcaaca
acttgcagggttttggaagaaatgagaaattctccatacaggacatttgtagacagaagg
aatgctgcaagtagaacaaagctgatctcagctaaaaacttaagggatttaggagggtat
gatggtgaaaagctcactgagttttatgcagaatgtcaagcattcaagaatctattaatg
tccagtgtaggtgattatatgaacagaacaaacgaagttttctttagcaactggtcattt
gaatataaaaataccaccctcaaagataacctgatgagccatgatgttatagacataata
aaatctttgcctaataagaccataaagaaagatctgatggtgcattttatttttgggaat
tatgttttttattacaaaactatgagtgatttgcataggaaagacaagtttgaagggtat
aaatccaactgcaaattgatgaaagtgaaaccgaaggaaacagaggaggaactcaaagtt
tatttggaaaacaatgagggcttattcgaaagtctttactctgaacacatggacaagata
aaagctgacatgatattaaagaaaagccaagagaaagagataaaatctatagaagaatct
ttcaatataaatgccgaaaattaccaatctgaatatccaggttgtttcacaaatgatcta
caggaaactaaaactaatttttctgtttgctggtctccatccacagaaagattatctata
gaagatatgaatttcaacaacagcataattgagaatttcagaaagtgctttgacgatgaa
gaggttttgatacacaatagaagctatggagggaaatctgatcaaagacagttttctaac
acactatttagattagtcaaagcttgtataaaggacttgagtcgcaatactacagggcaa
accaaagtcagagctgaagatgttgtagatataaaggatggaagtattaaaatatcaaga
gaaagcaaagaaaagggatggaaagaaataggtcatgttaaaaccaggaatggaaatgag
ttcacactcagtgagaaagtcaataaagaggttaagacagattttttcaaagggttgacc
ataatgaatattgacatgggaaaaaagaagaaaaatgaacacaagctaaatcttattaac
aaattgaaagaatctagagtagccaatgaggagctcatgatgaaagaaggtgaatatgat
gtttcatctaattctgaggttataaatatgcctttaagttcagtatctcataataaaaaa
ctcataaggcatgataacccagatgtaaagtattggtgcgactcaatgatacaaagcatg
tatgcgctgcatggatttgatatcagagatgaaaaatcagggaaaataaattctgtgtat
tcagagtattgcaatgatccaggagaattcttctcaaaagggaacttgattgaaactgaa
gttaacatttcaaaaaacatacataaggtttctcaatccttagcagtatattcatacagt
gaagatatgatgcaactggcaaaagggttgatggtggctgatagattcatgagaaaaaca
gatttcaaaatcttgacatgtgcaaacacaagcatgatttgcttagcatttaaaggtgat
ggtttgaatacaggtaaatctggtgtgccatatataacattgcataaagttccagagtca
cttcaaccttatttcacttcattatacactaaagagctagttgtgtctttcaagtcgggg
gatgattatgtaaatatcatgagacctcaaaggttaaatcaagtcagattgctcagtctt
ttcaaatcacctagcaaggtgcctgtctgcttctctcaatattgcctcctaagtaaagaa
gtcaaaagatggatttctagaaaaaccataaatttgatggactgcccatccaacatagtg
ccctttttgaaaaacatattgttttcgtctgttgtgataggcacagtaacaaagttgagc
aggatgggaatttttgatttcatgagatatgcaggattcctcccattatctgattattca
aacataaaagaatatatagctgaaaagtttgatcctgatataaccaatgttgtagattgc
tattttgtttcagggatcaaaaccttgctactaaaaatggagggcacaaatctgagcaac
agcataaaaccacttaccatagatcaagaaaatgatatgtctgggggtataaaagatctt
aacatagtctgtcctataactggatcaactttaaagacaatagagtgtctgtataacaat
gtttatttggcaatatacatgatgccaaagtctctccacacccatatacacaatttgaca
tctttgcttaatgtccctgctgaatgggaggttaagtttagaactaaaatgggtttcaga
ctagatgaagaaatagtgccaaagaaagaaatgttcaataattctggccctttttcgatc
gatggagcattaaatgtgaaaactctcttcgattactatttgaagactgttgacaatgtg
agctctacaagatccaacatagaatctaaagaagatttcttgtctactccatacaagata
aaaacattagcatcttcaaaaaaatgctctaaagcagacataattaagaactctgaaata
aaacagtgcttgataaattgcctagggaaagatccagaaaaacttagtggcaaagatgaa
tatgtgcttaaaggggttttaaagtgtttcgtggaagacaaagatgctttaagaaatttc
atgacactagaagaactagatgaatctgaatatttccattactttagctcactaacatct
ggggagaataaaacattgatgaagactagctatgataagttttattacaatagccatcca
ataacagttgaatcatttattaaagttagatatggacatatgtcaacaaccactgtactt
aaatcaaaaaaagtaagcgaagaactttatgacttaataaaagaatacaataagatcaca
acccttgatttagatgcattggaaaatttaggaaagggcttatcaggtaataaagtgact
tttattcaattgttggagttcgttctcttgaaaacaagaacaaatgctgggaatacagat
tttttagtttctgtttttgaaaaaatgcaaaggacaaagatggacagagaaatctactta
atgagcatgaaaactaagatgatgttgtatttcatagaacacacatataagcatatagca
caatctgatccatctgaagcaatatctatatctggtgattataaaataaaaacactagca
tcactatcttatgatacaataaccaattacaacacatctctgcagaaaggtttggaatgc
aaaatggcttttctctctgcagatcaatcaaagtggtcagcatctgatttgacatacaag
tacatattggctgttctaatgaacccagtactgaccacaggagagatcaacatgatgtgt
gaatgcatactgatgtacgtcaagctgaaaagagtttgtatacccacagatgtgttcttg
aacctgaagagagggcaaaatacatacggatcttatggaactgcaatatcatcactgaca
aacaatttagaaacaaatactttccccgtatctatgaactggttacaagggaatctgaac
tacttgtcttcagtctatcattcctgtgccatgctaggttatgaaaaagcattgaaaaca
aataaagatttcgagtttgcagtgagatggatggtacattccgatgataacgcaacttct
gttgttgttaaagggagtattactgagttcctgttgagatttaaatgcactaacctttct
gaatttttattcagaagtattcaatctcatttcaaaagttactgcataaccttaaatccc
aagaaaagctatgcttcggaatcagaagtagaatttatatctgaaaggataataaatgga
gctgtgatacctttgtactgcaggcatttagcaaactgttgcacagaatcatctcacaac
agttattttgatgatttgatgtcactgtctatacatataacaatgttgttgaggaaaggc
tgtccaaatgagctaatctcatttgcttatgcagccatacaatgtcaagcacttagcata
tactcaatgctgcctggtgaagagaatgatataatgtccataggaaaagatgtaggattc
cctttgactaaaaaggaaattccgacatgtgttggaggctggatgagagcacctgtggaa
atgctatctgtattgggtccatcttccaatgatcaatatatttattataaaatattgata
gagttttttaggcaaaaagatttctcgacactcaaaacccaagtcaatagtttaggttat
gtgacatctaaaatcaatgaactaaataagggaatagcaaaagacgaacttactaaagaa
gatataaaaatgatttgtatggtaaacttgttcaaaactagcttaatgtcagaagatagt
gacagtttaaatataggaatgaaattccaaacaatgatgacccagataattaaactccca
agctatgtaagtgaaggttccttaatgaagaactctagcttccaagatttctgtaagcta
tttccaaatctgaaaaggaattcagatatgctgaattctttaaaaagagttcagatcgac
gaagacagcatggattgtttatctgaagatgacgcaatgttatcaagaatacaaatggaa
gagttatacaagcacatggcaaaacacccagaagcccttttaatagctccaatgaatgat
aaagattacatactaaccaatctgtacatgtatagcagcataagtaagagaaaccagatg
tctaatcaatctacagaaaagctggcactagataggatactgagatcaaaagcaaagacc
tttattgacccaaactctaatcagatgatgacatacaaagagaatatgtcatccaaattg
aaagaaattatggataaatctgcaaatgattataaaattatctcaactatttccgatatg
atggtgaaagatatgaattttgaaatgatcatatctctaatagaaaattcagttgccaat
gcatctattccaaagacaaattataatttcagatggtttgtcacagaaaaagtacctagt
gtaatagagggatcacctgggttgattgtaatgtctgcagtatatggaatggaatacttg
gtagatctaggattgaaaagaatgccgttaactgaaagttcaatctgtattttgcatgat
gtatttggcaataggaagacatttgacgatgtaaaaaactacctgacatctaaaagttca
gaaatgaaaactaaagaattcattctagctgatgagttaaaaagaggaatactgtctata
aattatatgatacaatcccaaaataaattgttgtctttaaatacatgcttttctaggaag
aatttccctttttattctaagtacaatttagggaaaacatttatcacaaacactttggca
ttatggagcacaatatacagcagaaccacgaatataaatttctacaccaacttaaacttt
gtaatagatcgaagttccagattgatagtttcgcttcaaagagacatgattctggaaaaa
ctgcttgattgctgctcatatgtttctgacagaactcagagcttgttccctgacatgaag
attgaagacattagaaacattctatcaaaactcaattttaactctgtgaatctgctccaa
agagtggtgtcagaaatcaagcctgtaaagagagccatttcccaagtaaaaactgcaagt
catgtgaccctgtcttatagacctcagctaatggccatgagtaaacatgcagcatggcta
tacaattttggttatatcaatgaaagagattttaaatttgtgattgagcagataagacag
agtgaagtatattatatcaaaacagacgaactagatactcatgggtattatgtttcaggc
atttcatataaaataggaataaaaactttgctgaattatgcgcagctagaaatgaaaaac
aaggacattgcaatccatctgaactctccttatgaattcattagagaagaagataacaaa
atgtgggacacacatgtaagttctgtttacaagcttttgcagaaactactcatagataag
cagaatgccataaagacatttttgaacatgaaagttgatctgttgccaaatgaattctgc
atacatgaaagctcacaaaaaaatctgctaatatacataaatgaaactaatagggtgatc
acattggataaagttaaattcaagggcaaagtaaaatataacttctgcaatgatttcact
tggtctctcatggagaacaattataattatatgttaagacaagcagaaactggagagtgc
ttttcagatctctacaaaacaatagatagtgggaatagtttgatggagaaaatattaaaa
aatcttaaatccagcttaatttatagttcagatgcagaaaatatgctgtcaacagctgtt
caaggaatagaagatgaagagaacaaaaacatttttgaagattctcttagacagatttat
gagataacgtacaaaggcttaaaagaatgcaagtcttcagaagaatttgaaatatatctg
aaggagaatgagtttgacgacctggttaacatgcaaaaagaaatgttggaaacaatctgc
caagatctctccgacacagattctagaatacagaatgtggttgacaaacttagagtctgg
tctagcagtctttcaaactttggagagctatgtgtaatgttaaaattcgctatggtgaat
gattctaagggaataagaacttacaaagcaaacggtgttgaatttcactcactttcttcc
agtgaatctatactatgttcaggttatgatatctttgaaatgctgaagcttataaaggcc
tgcgaggcatgtcatacaagtaactcaaccctgaatttaatagcttttagggatataaaa
agcagaaaatatgtccacccatatcgcagaaaatttggaggcagtgttattttcaattat
ccactgaagcttaacaatgacgttatgtcgagattttatgaacacaagacaatttcattg
agtgacatacagataacagaatcagttagagaaatcctcgggcaaaacgggtttacagtc
actggttcaaacgtcaaattagagtctgacatgctagaactaaaccctgttacaatactg
gatgatcacagcacttttgacagtgtttctagacagatgagattaacaaaaaagaaaagt
tcatatttgattccagcaaacacactcctactcggagaattaatgaagtttttgatgtta
tgcattaaaggaaatgaatatgatgtgcaaaaaatgctgagtgcacattttgacctctca
atggaaagagatgaccgaatggatagcttaattaaaactataatgacattgcgtgcaagt
ggttatgtccagagatattttggcaacacaaatgaagaagagattttgctgggtgtagct
acaagtttagaaaacttcatgatactatcaacaccaggtggtgaatttcaagaaccattc
gatgcactaagactgataaataattctttttcagagaaagaaaaagacaaaaagttgaaa
atacttttaagaataaggtcttatatatcatctaaattaggttacctaaatgagcaatgt
atatacaaaaatatcacaaatttagaaataaacaatttggttttcagctcaatcaattac
atagataaagaaatttcagaattaagaacttttgataaagcagtctatcacaatgaattt
aacgagtatcttaaacacactgaaggtgcaagttctgactga
DBGET
integrated database retrieval system
