Viruses: 2943104
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Entry
2943104 CDS
T40000
Symbol
ArMVs1gp1
Name
(RefSeq) Arabis mosaic virus; polyprotein 1
Virus
12271
Arabis mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_1
RNA_helicase
DUF3760
Parathyroid
Motif
Other DBs
NCBI-GeneID:
2943104
NCBI-ProteinID:
YP_053925
RS:
NC_006057
UniProt:
Q6W8W5
LinkDB
All DBs
Position
NC_006057:228..7082
Genome browser
AA seq
2284 aa
AA seq
DB search
MWQISEGSQCCCTGKTWSNAEAKEARYVCNCILSCRLVKVEVVPQLPKSRIAPAQDKAER
ITPLCNSNGGAAPTIPKSKRAFEPRTPLIKQRCDVVVRVGPPADLDLVYPALVQEEVAIP
PTEKVLQPTLKAEVRVPIFCAPKRMVAFPKPPTKIASKRDALQFPAGAVAFNGINFIDAK
GKVVLSEGAKRILKGIRVAKQQRQRTARRSAACKKVRKARDLALFKRLSEECTFQDLPGG
FAGEIPAGHACYRKVAAPTTSFKKEVSKGKKAKKPSTPVLPAQDFSCVDSFDWGEKSSPV
EIEDDWVLIEKPVLQRQAAHSAQGRATEALTRFAASGGFTVKAHQKVEELASSGEAGHLI
AGEFAELCLRSLVYNDAPVLSASIEELITEQDFKDAIELFNIELAELPTDSTTCGQFNDW
ASAAKKMAKGVGSIVGDFARMSGAGVLITFDRCIEYLQKKALTFCQKVFNATMAPYLSHL
AEASNIISKIWKKLAEWMESLKGKAGLALEVLAQHAIFALGAIVVGGVVVLVEKVLVACK
VIPNCGIVLGAFLTLFFASLGLTALECTAEEIFRMHQCCKGAIYSMYSVKEPMNEAEGSS
VTMGVLQGLDNAISALTRVGQSMISFKLGSFSYYAKIAQGFDQLARGKKAIGELTGWLID
LVGGVYSKVSGQESTFFDELSTIVCLDVRSWLLKSKRVRLQVETMAIGDRITLDTISKPT
GMQGHKILITAAGVPRKTSADFTMCIKEEVSKLEEVHQRTACAGINEGMRQFPFWVYIFG
ASQSGKTTIANSVIIPSLLEEMNLPKTSVYSRPKTGGFWSGYARQACVKVDDFYAIEQTP
SLASSMIDVVNSEPYPLDMAYLHEKGMSMDSPLVVTTANTVKPPTNAGITDEASFFNRRA
AVIEVRRKDNTHFTPRAYDNCIEVRFLHNKCAYVDSEGIPQGPAVNTPMEEGWISPSEAV
ATLKNLLGEHVLAEEEKLLDYRERIGNDHPIYNAAQEFIGNMHYPGQWLTTEQKNTYGIN
EEGFSFLAVDGKMYKYNVLGKLNPCETVPPHPNVIPWLEEKTLSIVHWDAHKHIATGPRN
ALVSCFLQGLVQDQSRVQSVDLMGKDSSPEQQAFFKRLTLSERIYLRLCQIRIDAVKKEQ
LSSVSRGALDVLRDCMYKSKAKLVENYSLLLTLVAILVLIATAYSLISTLIGLAGCSSFA
GGMVALNHVSNASIPCSEPRLEEGYIPRNKFVSRISRTRGDGPAQGQGDHEELVTELYYY
FDGVKRLISCCWFKGRSLLLTRHQAMAIPIGNEIQVIYADGTERKLVWPGRQEDRSCKGY
IEFPDNELVVFEHARLLTMPIKYEKFFVDDPDHQISPNVAVKCCVARLEDGIPQFHFWNK
YASARSDVHTIKDEGGSAVYQNKIRRYIIYAHEAKRNDCGAIAVAEIQRTPKVLAMLVSG
IGNVTYSSVIPSYSSSFVRGDVPYVPEDGIKTNGYRKVGYLMAKDAPHVPSKTAFMKVPD
EICFPYPNPKQPAILSAEDERLIGTVHEGYTPIREGMKKFAEPMHLLDAQLLDEVAGDMV
HTWFDAGEILEDVPLSIAINGDVEEEYFDPIAMDTSEGYPEVLQRKNGEKGKARFFVGEP
GAREFVPGCGPERAYLSLEEECKTRIPSLVSIETPKDERLKRSKIETPGTRLFSVLPLAY
NLLLRVKFLSFSRLLMKKRSHLPCQVGINPYSREWTDLYHRLAEKSDVGYNCDYKGFDGL
ITEQILAVVATMINAGFRNPVSNQQRSNLLMAISGRLSICGSQVYETEAGIPSGCALTVV
INSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQSIMTSFTGDALKAEM
ANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGLIYAPLEKLSIMSSLVYIRSD
GSDMLQKLVDNVNTALVELYLHQDREYSESVRDFYLEKLPPGSYKELTTWYEAQIFHECQ
LSGESGWKPQGLIEVSHGASFASFVQQNGTELERHDICPGLAISGSKYIAREEEILMSLS
SLLPGDINAVKLTLKCGDGIGRLPSKASVLSQRKPGIVMQLCARAIKEKKTLVIRDERPY
IGGWAMACICGESFGFSIKDTLALYANLMGPNRKNGLATYFTDFDSPVHVKKIHAITNGE
EGVAMLKDSFAFCEPTTIAATSCDTRKEMVSHLPTSFPNIVLIGGISYPKEGGEPGALYS
PTDVVMSKKLQGVYVSEAVLKCCLRCPGAAVKTVLQTSSPGSSLSQAHFRSLRRVQSHRC
MRKS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaatttctgagggttcccagtgctgctgcactgggaaaacctggtccaatgcc
gaggctaaggaagcccggtatgtctgcaactgtattctcagttgcaggcttgttaaggtt
gaggtagtacctcaacttccgaagagcaggatagcgcctgctcaagacaaagcagagagg
ataacacctctttgcaattcaaatggtggggcagcgcccaccatcccgaaatccaaaagg
gcctttgagccccgcacacctttgatcaagcaaaggtgtgatgttgtcgtcagggttggc
ccaccggctgatcttgacttggtataccctgctcttgtgcaggaagaggtggcaatccca
cctactgaaaaggttctgcagcctaccttaaaggctgaagtgagggtgcccattttttgt
gcacccaaacggatggtggcttttcccaagccacctactaaaattgcatccaagagggat
gctctacagttccctgctggggctgtagcttttaatggcatcaattttatcgatgccaag
ggaaaagtcgtcctatctgagggcgcaaagaggattctcaagggaatccgcgttgctaaa
cagcaacgtcaaagaaccgcgcgcagatctgctgcgtgcaaaaaggttcgtaaagccaga
gatctggctttattcaagcgcttgtctgaagagtgcaccttccaggatctgcctgggggt
tttgccggtgaaattccggccggtcatgcctgctaccgaaaggtagcagctcccactacc
tcctttaaaaaggaggtttccaaaggaaagaaggctaaaaaaccttctacgccagtgctg
ccagcacaggatttttcctgtgttgacagttttgactggggggagaagtcctctccagtt
gaaattgaggacgactgggtcctcatagaaaaacctgtcctacaaaggcaggctgcgcac
tctgcgcaggggagggcaactgaagccctcactagatttgccgcctcaggcggctttact
gttaaagcccaccaaaaggtggaggagctagcctcatctggagaggctggacacttgata
gcgggagagtttgcagagctctgcctgagatctttggtgtataatgatgcacccgtcctt
tctgcctctattgaagagcttattactgaacaagattttaaagatgccatagagctcttc
aatatagagttagctgagttgccaactgattccactacatgtgggcaatttaatgattgg
gcttctgcagccaaaaagatggctaaaggagtaggatccatagttggtgatttcgctcgc
atgtcgggggccggtgtgcttattacttttgataggtgcatcgaatacttacagaaaaaa
gctttgacattttgtcaaaaagtgttcaatgctaccatggccccctatctgagccactta
gctgaggcttccaatataattagcaaaatttggaaaaagctggctgagtggatggaaagt
ttgaagggcaaggctggattggctttggaagtgcttgcacaacatgctatctttgccctt
ggagccatagtcgtgggaggagttgtcgtcctcgttgaaaaagtactagtagcctgcaaa
gttattcccaattgtgggattgtgctaggtgcttttttaactcttttctttgccagctta
gggttgacggctcttgaatgcacagctgaagaaattttccgaatgcaccagtgttgcaag
ggtgctatatacagcatgtactcagtaaaagagcccatgaatgaagccgaaggaagttcc
gtaaccatgggagtattgcaggggcttgacaatgcaatatctgctctcacgagagtcggt
cagagcatgattagcttcaaacttgggagcttttcgtactatgccaagattgctcaggga
tttgaccaacttgctcgaggaaagaaagctataggtgaactcactggttggctcatcgat
ctggtaggaggtgtttattccaaggtctctggacaggagagcactttcttcgatgaactg
tcaactatagtatgccttgatgttagatcatggctgttaaagagcaagcgcgtgagattg
caagttgagactatggccattggtgatagaatcactcttgatactatttccaaacctaca
ggaatgcaaggccataaaattctcattactgcagccggtgtgccgaggaagacttctgct
gatttcacaatgtgtatcaaagaggaagtttctaagttagaggaagtacatcagcgcact
gcttgcgctggtattaatgaaggaatgcgccagtttcctttctgggtatacatctttggt
gcttcacaatctgggaagactactatcgccaattctgttatcatcccttcacttttagag
gagatgaaccttcccaagacttcagtgtattccaggcctaaaacaggaggtttctggagt
ggttatgcaagacaggcgtgtgttaaagttgacgatttttatgccattgagcaaacgccg
agtcttgcttcttctatgatagatgtggtgaattctgaaccatatcctctagacatggcc
tatttacatgaaaaaggcatgtctatggattcaccacttgttgtgacgactgcaaacact
gtcaagcctcctactaatgctggtattactgatgaggcttctttttttaatcgccgcgca
gctgttatagaagtgcgcagaaaagataacactcatttcacgccccgtgcatatgataat
tgcatcgaagtgaggtttttgcacaacaagtgtgcatatgttgattctgagggcatccct
caaggtcctgctgtaaacacgcccatggaagaagggtggatttctcctagtgaggcagtt
gccacactcaaaaatcttctaggagaacacgtccttgctgaagaagaaaaattgttggat
tatcgtgaaagaattggcaacgatcatcctatctacaatgcagcacaagaattcataggt
aacatgcattatcctggacagtggttaaccactgaacagaaaaatacctatggaatcaat
gaggaaggattctcttttcttgcggtcgatggaaaaatgtacaagtacaatgtgcttggt
aaactgaatccttgtgaaacagtaccaccacatcccaatgtaatcccatggttggaagaa
aagacattatcaattgtgcattgggatgcgcataaacacatagctactggtcctcgaaat
gctttagtttcttgctttttgcaaggtcttgtgcaggatcagagtcgtgtccaaagtgtt
gatctgatgggcaaagatagttcacctgaacagcaagcttttttcaaacggttgaccctg
tctgagagaatctatctcagattgtgtcaaattcgcattgatgctgtaaagaaagaacaa
ttgagtagcgtatctagaggagctctagacgtgctgcgagattgcatgtataaaagtaag
gccaaacttgtggagaattattctttattgttgactttggtcgcaattttggtcttaatt
gctactgcctattctttgatttccactttgatcgggctagctgggtgctcgagtttcgct
ggaggaatggttgctttaaatcatgtttctaatgcttccattccatgttcagaaccccgg
cttgaggaaggttacattcctagaaataagtttgtgtcgcgtatttctaggacgagagga
gacggtcctgcacaaggccaaggagatcatgaagaattggtcactgaactctattactat
tttgatggagttaagagacttatttcttgttgttggtttaagggacgttccctcttattg
acaagacaccaagcaatggccattcctataggaaatgaaattcaagtcatctatgctgat
ggcactgaaagaaagcttgtttggccaggtaggcaagaagaccgctcatgcaagggatat
attgaatttcctgataatgagcttgttgtatttgagcatgctaggcttttaaccatgcct
atcaaatatgagaagttttttgtggatgatcctgatcatcagatttctcccaacgtcgcc
gtcaagtgttgtgtcgcgcggcttgaggatggaatcccccaattccatttttggaataag
tacgcttctgcgagaagtgatgtacacactatcaaggatgaagggggaagtgcagtatat
cagaataaaatcaggagatacataatatatgcccatgaggctaaaaggaatgattgtggg
gccatcgctgttgccgaaatacagcgtactcctaaagttcttgccatgcttgtttctggg
attggcaacgtgacctattcttctgtgattccaagctatagctcctcatttgtgaggggt
gacgtgccttatgtaccagaagatgggatcaagacaaatggatataggaaagttgggtat
cttatggcaaaagatgctccgcatgttccaagcaaaacggcattcatgaaagtgccggat
gaaatttgctttccttatcctaatccaaaacagcctgccattctgagcgcagaagatgaa
cggttaataggaactgttcatgaaggatatacccccatccgcgaaggcatgaaaaaattt
gctgaaccaatgcacttgcttgatgcacaactgcttgatgaagttgcaggcgacatggtt
catacatggtttgatgctggggaaattttggaagatgtgcctctgagcattgccattaat
ggtgatgtggaagaggaatattttgatcctattgccatggatacttctgaagggtatcct
gaagttttacagagaaagaatggagagaaaggtaaagctcgattcttcgttggagagcca
ggggcaagagaatttgtacctgggtgtggaccagaaagagcttatctgagccttgaagaa
gagtgcaagacgcgcatcccttctttggtcagtattgagactcctaaagatgagagattg
aagcgatctaaaattgaaactccaggaactaggctgttctccgttttacccttggcatac
aatttgctcctacgagtaaaatttttgtctttttcccgcttactgatgaagaaaaggagt
catttaccctgccaagtaggtatcaatccttatagtcgcgagtggactgatttgtatcac
cggttagcggaaaaatcggatgtgggatacaattgtgactataaaggatttgatggccta
attacagagcaaattttagccgttgttgcaacaatgataaatgcaggatttcgtaatcct
gtgagtaatcagcagcggtctaatcttttgatggccattagtggtcggctctcaatttgt
ggcagccaggtttatgaaaccgaagcgggtattccttcaggatgtgcattgacagttgtc
ataaactctatattcaatgagttgttaatgcgctattgttataagaaaattgtgccccca
atttatcgagagtgttttgatagatgtgtcgttctgatcacctacggtgacgataatgtg
tttacagtgtcacaatctatcatgacgagcttcactggcgatgctctcaaagctgagatg
gccaatctgggagtaacaattactgatggtaaggacaaaagtcttgccacaattccagct
cgcccacttctggaattggaattcttgaaacgtgggttcaagaaaggaaacggaggcttg
atatatgcgcccctagagaagctgtccatcatgagctcacttgtgtatattcgtagtgat
ggttcagatatgttgcagaaactcgttgataatgttaacacagctcttgttgagttatat
ctgcatcaagatagggagtattcagaaagcgtccgagatttctatctggaaaaacttccc
cccggatcttataaagaattgacaacatggtatgaagcacagatcttccatgaatgccaa
ctcagtggggaaagtgggtggaagccccagggattgatagaagttagtcatggtgccagt
tttgctagttttgtgcaacagaatgggactgaactggaacgccatgacatttgtcctggg
ctggctatatctggatctaaatatatagccagggaggaagagatactgatgtctcttagc
tctcttttgccgggtgatatcaatgctgtgaagctcactcttaaatgtggggatggtatt
ggccgtctcccttcaaaagctagtgtgttgagccaaagaaagcccggaattgttatgcaa
ttgtgcgcgagagcaatcaaagaaaagaaaactctcgtcattcgtgatgaaaggccctat
attggaggatgggccatggcttgtatttgtggggaaagttttggtttttccattaaggat
accctagcactttatgccaatctcatgggacctaataggaagaatggacttgctacttat
ttcacggatttcgacagtcctgttcatgtgaagaaaattcatgccattactaatggagaa
gaaggagtagctatgctaaaagattcttttgctttctgtgaacccaccaccattgcggcc
acttcatgcgatacgagaaaggaaatggtttctcacctacccacatcatttccaaatatt
gttctgattggtgggattagttaccccaaggaggggggggaacctggcgcgctgtactct
cccactgatgtagttatgtccaaaaagttgcagggcgtatacgtcagtgaagctgttcta
aagtgttgtttgagatgccctggtgctgctgttaaaacagtccttcagacttcctctcct
gggagtagtttgtctcaagctcattttaggagtttacgccgagtacaatcacatcggtgc
atgcgtaaatcataa
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