Viruses: 2943106
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Entry
2943106 CDS
T40000
Symbol
TRSVs2gp1
Name
(RefSeq) Tobacco ringspot virus; polyprotein
Virus
12282
Tobacco ringspot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Nepo_coat
Nepo_coat_C
Nepo_coat_N
MP
Motif
Other DBs
NCBI-GeneID:
2943106
NCBI-ProteinID:
NP_919039
RS:
NC_005096
UniProt:
Q6UR06
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Position
NC_005096:123..3428
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AA seq
1101 aa
AA seq
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MEPLLWHVDATTPSHIQALQSGSLPPASPAAALTRVQRALSFFRTAARKYCKQADAPDLF
ALAMTRVAEHNDIAVDARNVEQLFHFVGQHVANTAERKALRAALREQRALFKASLPGACF
PAPAPPGWGIPKPPPLPPPFVWKGCRYNVVAPPPRIPQPPPLPKFAPFVRNNFRVVAPPP
LGEVYQPVGAPFPQTRASAALSFFRTASTCRQVLVESCIQQPAFMTCCASTGEVQEMTSM
LTEARQTGKILTPKEVSQALAQKRKEIKGAEENRISFDEGVHLTEADVFHRLSLAKRFMA
HKRDRTLVDVLMPTEHEVVRYPGTRPDGTLQMCVSALPRMSEEAARKLLEKGWKNSKNVS
LDIGVTSYMPYGAPIVAFMTIMDGRTDDPQEAALCANYMDLGREKSKVLSLPLVTIPLSE
IEHDQGILDCLYIVTYFHGVQSYQPGTLMMSYGTLEFQEYSNNSFTTATRVRESWDQILK
RNENLGKRVHAGIGVLGTIEKEMDQQLEDFPAINLETRPRPVVRTFQNAHQPLHKTRSMR
IGTTSFTGNTGRTVLPPVVKTYEEGNANFDSLQSKPRHSSASTAHLMCAVTVVPDPTCCG
TLSFKVPKDAKKGKHLGTFDIRQAIMEYGGLHSQEWCAKGIVNPTFTVRMHAPRNAFAGL
SIACTFDDYKRIDLPALGNECPPSEMFELPTKVFMLKDADVHEWQFNYGELTGHGLCNWA
NVVTQPTLYFFVASTNQVTMAADWQCIVTMHVDMGPVIDRFELVPTMTWPIQLGDTFAID
RYYEAKEIKLDGSTSMLSISYNFGGPVKHSKKHAISYSRAVMSRNLGWSGTISGSVKSVS
SLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLG
ILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVV
NFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWPRSKQAQAQEGSVSI
TTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATPSGALGKQNYVRISIVNAKDIV
ALRVCLRPKSIKFWGRSATLF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctcttatggcacgttgatgccaccactccttcccacatccaggctctccag
tcagggtctctccctcctgcttctccggccgcggctctcacccgcgtccaacgcgccctt
tccttcttccggactgctgcccggaagtactgcaagcaggccgatgcgcctgacttgttt
gccctggcaatgaccagggttgctgagcacaacgacattgccgttgatgcaagaaatgtg
gaacagctgttccactttgttggccaacatgtggccaacactgctgagcgcaaggcgctc
cgggctgctcttcgtgagcagcgggctttatttaaggcatccctgcccggtgcctgtttt
cctgctccagctcctccaggctggggtattccaaaacccccccctcttcctccacctttt
gtgtggaaaggatgccgctacaatgtggtggcccctcctccacgcatcccgcaaccacct
ccactgcctaaatttgcgccttttgtgcgcaacaactttagagtggttgctccccctccc
cttggtgaggtgtaccaacccgttggtgcacctttcccacagacccgggcctccgcggcc
ctctccttctttcgcactgcctccacctgcaggcaggtcttggttgagagctgcattcag
cagcccgccttcatgacttgctgtgcttctaccggggaagtgcaagaaatgacgagcatg
cttactgaagctcgtcagactggaaaaatcctgactcccaaagaggtgagtcaggccttg
gcccaaaaacgcaaagaaatcaaaggggctgaggaaaatcgcatctcctttgatgaaggg
gtgcatttgacagaggcggatgtcttccatcgtctcagtcttgcgaagcgcttcatggcg
cataagcgagaccggactttggtggacgttttaatgcctactgaacatgaagttgttcgg
tatccaggcacccgccctgacgggacattgcagatgtgcgtgtctgcccttccacgcatg
tctgaggaagcagctaggaagctgcttgagaaggggtggaagaactccaaaaacgtctct
ctagacattggggttacttcctatatgccatatggtgcgcccatagttgcattcatgact
attatggatgggcgtaccgatgatccacaagaggcagcactttgtgcgaattacatggac
cttggtcgagaaaagtccaaggtgttgtctcttccacttgttaccattcccctctctgag
attgaacatgatcaaggcattttggattgcctttatattgttacatattttcatggtgtt
caatcttatcaacccggaactttaatgatgagttatggaactcttgagtttcaagaatat
tccaataactcttttacaactgctactcgggttagagagagttgggaccagattctcaaa
cgcaatgagaatcttgggaaaagagtccatgccggcatcggggtgcttggcactattgaa
aaagaaatggaccagcaacttgaggacttccccgccataaatctggaaactaggccacgg
cctgttgtgcgaacttttcagaatgcacatcagccgttgcataagaccagatctatgcga
attggcactacctcttttactgggaacactggtaggactgtactcccaccagtggttaaa
acctatgaagagggaaatgctaattttgattccctacaatccaaaccacgtcacagctct
gccagcactgctcatttgatgtgtgctgtgacggttgttcccgatcccacttgttgtggg
acattgtcctttaaggttcccaaagatgcgaagaaaggaaagcatcttggaacttttgac
attcggcaagccattatggaatatggtggtttgcattcccaagaatggtgtgcaaagggc
attgttaatcccacttttacagtgaggatgcatgccccacgcaacgcctttgcaggtttg
tctatagcgtgcacctttgatgattacaaacgcatagacttaccagcgcttgggaatgaa
tgtcctccctccgagatgtttgaactgcctaccaaggttttcatgcttaaagatgcagat
gtgcatgaatggcagttcaactatggggaacttacaggacatgggttgtgcaattgggca
aatgtagttacccagcccacattgtacttttttgttgcgtccacaaatcaagtgacgatg
gctgctgattggcagtgtattgttactatgcatgtggacatggggcccgtcattgatcgt
tttgagttagttccaactatgacgtggcctattcaattgggtgacactttcgccattgat
agatattatgaggcgaaagaaattaaacttgacgggtcaacctccatgttgtccatatct
tataattttggaggtcccgtcaagcattctaagaaacatgccatttcatattcccgggca
gttatgtctaggaatcttgggtggtctggcactataagcggaagtgtcaagagtgtttct
tctttattttgtaccgcttcttttgttatttttccatgggaacatgaagcacctccaacc
ttacgtcaggtgttatggggcccacatcagataatgcacggagatggccaatttgaaatt
gctatcaaaactcgtcttcattcagctgctacaactgaagaagggtttggtagacttggt
atactcccgctttctgggcctatagctcctgatgcacatgttggatcgtacgagtttatt
gtacatatagacacttggcgacccgactctcaggtgcatcctcccatgttttctagtgcg
gagctttataattggttcactttaaccaatttgaaaccagatgcgaacactggcgtagtc
aactttgatattcccggatacatccatgacttcgcctctaaggacgcaactgtgacgctc
gcatcaaatcccctctcttggcttgtcgcagctactggctggcattatggtgaggtggat
ctctgcatctcctggccaaggtccaaacaggcccaggctcaggagggtagtgtttccatt
accactaattatagagattggggtgcttactggcaaggccaggcccggatttatgatttg
cggcgtactgaagcggaaattcccatcttcttgggttcttacgctggtgcgacgccatct
ggtgccttgggtaagcaaaactatgtccggatttcaattgtcaatgctaaggacatagtt
gcactgcgagtgtgtttgcgacccaaatctataaagttttggggtcgctccgccactttg
ttttaa
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