Viruses: 2943165
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Entry
2943165 CDS
T40000
Symbol
AgMVgp1
Name
(RefSeq) Agropyron mosaic virus; polyprotein
Virus
41763
Agropyron mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C6
Poty_coat
Poty_PP
Potyvirid-P3
RdRP_1
Peptidase_C4
Peptidase_S30
DEAD
Helicase_C
Flavi_DEAD
ResIII
Peptidase_S76
Peptidase_C39
Motif
Other DBs
NCBI-GeneID:
2943165
NCBI-ProteinID:
YP_025106
RS:
NC_005903
UniProt:
Q6PY35
LinkDB
All DBs
Position
NC_005903:132..9368
Genome browser
AA seq
3078 aa
AA seq
DB search
MAQVSFLQFGETGTGITFDQHTWHVLPYDKEAHERSVAKKWHAYYLQAGEELSRQSHALQ
KFDSVFYKRRALIGIEEPVDITDWMADDDDGHEIVSEFKVIPKQRRNKLPRHTGIAENLT
RAILNIARKTHVEIEIVGKKRNQMRFKNTHGHELLHVKTQHEFKKLVRTDLKTDEFLTEI
LRIARHTEHVKPITKVGEIKPGHSGAVLATEADQLFIVRGIAETMLVDAREHFKGDLKRI
QHFSEDKNEKVTISPFRHAYNLPQNPHMCALQWDETSVVQFQQMLSQAFVPQTHFQCGMC
AANAAERSRSEIITDARNSHMMGALEQERGSGRWNALANIFDTLLGSSETEAGIQITQEI
AKICFGNNTEPFRSIMQITQVLTDPFTCDGEKVQQAREATLQLARYLKNRELNVGTSSKD
VFKNPYPPVSKVNYVLARGNGKITNVEWGERMQLIRSFMCKHFFWTDIDKASTFSRRKHI
RGERLVAAPALQIPRTMRETRSLMEGEKVQEFPITDACKTWRNGQLVYTCCCVTHTDGAP
YLTQVHFPTTNAFCIGTQGNIELIANPFANTDGKILAAKAGLCYIQIFLAMYVHINEAQA
PRFIRLIAKMVELLGEWPTMRSVATACCMIGLYFPETQSAELPEVLVDHEHKTMHVVDSS
GSLSHGYHVLKAGTVKQIYSFMSDEIKSELAEYNVGGQHADIAKLIPTLIRATFNKQEFI
WLMSDNPYLILLAVLSPAVLRQVSDSGNLRRALCRFIHIDQPLAQILSTLDSLAAKVSRL
ELIDQQLECLYTSYPQMLDFVASLVESSPEEKLIKSFLLSHIRNTIEMQRSDIQLVHDGF
CTLNMEMRRKKELYYLEVVHTYFNECAYHQQLYLKLRTLRPCSYIKRCFRNLKQNFTKET
CSSCITTPLGWGTTGLWYAKSCVTGTISKGRKTAVSLVRKAAIKGITFVTPEIGKMLGML
SAISILLTIANSAHRMICRKRLEARRLALEKEDLLLDIIAKEMVDYCTVHKLLYTKELDY
TQFVDWLEKKHAEAGKLAHRLFLEEVEHQAKDTNHIWTEKCIATFVLVMMMFDTDRSDKL
YSTLNKLKGVFSTIGQDAVYHQSLDDIMDTDAAKNATIDFIREEEMEPKKPILSQTFEQF
WDTQITQNRTIPHYRTVGTLLEMTRETALDTVNTITKAAIGSEFIVRGGVGTGKSTYLPS
LISERGRILILEPTRPLTENVAEQLRGEPHYKSPTVMMRGLSVFGSSPITVMTSGFALHF
YANNRTMLKEFSYIMIDECHVMDADAMTFYSLCKDIGITAKILKVSATPPGRECDAKPIF
PVKMTICEQLTFEGFVNAQGTGSANDATVLGHDILVYVASYNEVDRLSSLLTNKGFAVTK
VDGRTMKLHNGPIPMIGHSGKKHFIVATNIIENGVTLAVDYLVDFGTKVVAELDMDGRRI
AYSKCPISFGERIQRIGRVGRIKPGGALRIGETKKGIPEIPESIATTAAFNCFLYDLPVM
TGQVSLNVLSRCTREQARTMAAFEISPFAMAPLTAYDGSMHPAVHSVLKRYKLRESEIKL
KRSSLPLRSSSSWFTVREYETFAGTILIDNKDVKIPFLINNIPHKVFEELWTAIMNNKAD
VTTMSISTIQSQKIAYTLQTDSTSLQRTITTIDMLIAEEQRKKQMFAAYTANSSGGFMVS
LSAIAQCLKSRWARDFCDHNLHTLIETRNQLCEFENLAVERYTEDIIRNYPCVTLVEHQS
RDEMIQKLQLKAKYDNRLIATDLALTAGTLIGGGVMLYKYVMNAVDEQVTFEGDSKRARQ
KLQFKQGRANKEYNEVYADEDTIRENFGEAYTKKGRKGANFTKGTGKKTHEFTHFYGIDP
TQYELVRYIDPLTGYTIDVNAQQAVNARSLEQAFIDERENLHEESLLAPGATFIPSDLQA
YFINTQTRRALRVDLEPHNPMRVGHRTNNIAGFPDREGEFRQSRPARPVNISQIPDKKDS
CVAHESKSHLCGVRDYTFVSKVICSLEYYFDDMVRCLYGICYDTFIIANAHLIPKPNGWL
KIKTKHGIFTVQNMQKLKIKEIKGTDLIVITCPKDMQPAPCRLKFRAPRKGEKVVMISTT
SNDSSGVPMVSEASVTTHKPNTNFWIHWISTKRGHCGLPIVSLDDQCILGLHSLGSVHVK
DNYYAIFGDNFVSENLLNTSPGDWMSRWSYNPDNIDWGTMDLKMSKPGGSFKTTKDITDI
DTDVEHQHNQYTWLTKYIGGNLAAVAKCPGNLITKHVVKGRSPTFSLYLSVDEEANAFFK
PLLSHYSPSRLNKEAFVKDVTKYDKLISVGDVDIECFVQSVQSVFNLLSRLGFQECAYIT
DAEEIFASLNMKAAVGALYGGKKETYFSDFSNEDKQQILKESYERLYEGKFGVWNGSLKA
ELRPNAKVEANKTRVFTAAPLDTLLAAKGCVDDFNNQFYSKHLEGPWTVGITKFKGRWND
FLRLLPDGWIYCDADGSQFDSSLTPYLINAILNVRLQFMQEWNIGKRCLENLYTEIVYTA
IATPDGSVIKKFRGNNSGQPSTVVDNTLMVVLAMQYAIAKHGLSPESTDSFIRYFANGDD
LVIAIAPEKVDLLDTLAQSFGELGLNYDFSSRVEKREDLWFMSHQGKLINDMYIPMLERE
RVVAILEWDRSHEPEFQMDAINAAIIESWGDDELIYQVRKYYNWLLEQEPYKSLADAGKA
PYLAETALTKLYTDVDASQEILDLYQNCVIELPQFDEPTLVYHEADDQQNSQDNPSSEDN
KTNPQTGDGQRTPAADQQQNRTNTENTENQQNAANQQRNRTTENAQKAANDDKSKQLAKA
QSKEVVRQNNEKRAMNSGGDDADVTIKDETKTFVIPKVEVLNKKLRMPKFKGKAMVNVDH
LLVYKPDQRDLSNKRATQRQVDNWVEKVAKDYGVEESSMDIIINGFMVWALDNGTSPNIT
GTWIMMDKEEQREYPIEPLVRHAQPTLRQIMMHLSDTATGYIVLRNTKERYMPGYGLKRN
LNDMSLAPYAFDFYEITSETPNRVREAHLQMKAAAIRGKVNRTFGLDGTVSSGSEDTERH
TVDDVKHGTHSFYGAGMN
NT seq
9237 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagtgagcttccttcagttcggcgaaactggaactggaatcacgttcgatcaa
cacacctggcatgttcttccatatgacaaagaagctcatgaaaggtcagttgccaaaaag
tggcatgcatactacttgcaagcaggagaggaattatcacgccaatcacatgccttgcaa
aagttcgattcagtattttataagagacgcgctcttattggaatcgaagaaccagttgat
atcactgactggatggccgatgatgatgatggccatgaaatagtgagtgagtttaaggtc
ataccaaaacagcgcaggaacaaacttccgaggcacactggtatagctgagaaccttacg
cgtgcaatactaaatattgcgcgtaagactcacgttgaaatagagattgtgggcaagaaa
cgtaaccagatgcgtttcaagaacacacatggacacgagctgcttcatgttaaaactcaa
catgaatttaagaaacttgttagaactgatctcaaaacagatgaatttctcactgaaatc
cttaggatagcacgccacacggaacatgtaaaacctattaccaaggttggagaaatcaaa
ccaggtcacagtggagcggtgctcgcaacggaagcagatcaattgttcattgtacgaggc
attgcagaaacaatgctagtcgacgcacgtgaacatttcaaaggtgacctaaagcgcatt
cagcacttcagtgaagacaagaatgagaaagtcacaatcagtccattcagacacgcatat
aacttgccacagaatccgcacatgtgcgctttgcaatgggatgaaacatctgtggtgcag
tttcagcaaatgttgagtcaggcctttgttccacaaacacatttccaatgcggaatgtgt
gctgcaaatgcagcagagaggagcagaagcgaaatcattaccgatgcacgaaactcccac
atgatgggtgcacttgagcaagagagaggaagcggtaggtggaacgcccttgcgaacatt
tttgatacactgttagggtcatctgagacggaagcgggtatacaaataacgcaagagatt
gcaaaaatatgctttgggaacaacactgaaccctttagaagcattatgcaaatcacgcaa
gtactgaccgaccctttcacttgtgatggagaaaaggtacaacaagcacgcgaagcaacc
cttcagttagcacgatatcttaaaaatcgtgagctcaatgttggtactagttcaaaggat
gtatttaaaaatccatacccaccagtctcaaaagttaactatgtattagcacgtggaaat
ggaaaaatcacaaatgtggagtggggagagcgaatgcaactaatacgctcctttatgtgc
aagcatttcttctggactgacatagacaaagcaagcactttttccagaagaaaacacatt
agaggggaacgacttgttgccgcaccagccttacaaatacctagaacaatgagagagaca
agatcattgatggaaggagaaaaggtgcaagaatttccaatcacggatgcctgcaaaaca
tggaggaatggacaacttgtatacacatgttgttgtgtaacacacactgatggggcacca
tatttgacacaagtgcactttccaacaacaaatgctttttgcataggaacacaaggtaac
atcgaactcatagcaaacccatttgccaatactgatgggaaaatactcgctgcaaaggca
ggattgtgttacatacaaatcttcctagccatgtacgtgcacatcaacgaagcgcaagcg
ccgcgattcattcgcctcattgcgaagatggttgaacttctcggtgaatggccaaccatg
cggtcagttgcaacggcatgttgcatgattggtttgtatttcccagaaactcagagcgct
gaactcccagaggtacttgttgaccatgaacataaaacaatgcatgttgttgattcaagt
ggatcactatcacatgggtaccatgtgcttaaggcagggactgtgaaacagatatactcc
ttcatgtctgatgagatcaaaagtgaactggccgagtataatgttggtggacagcacgct
gacatagcaaaactaataccaactcttatacgagcgacttttaacaaacaagagttcatc
tggttaatgagcgataatccctatcttattcttttagctgttttatcgccagctgttttg
cggcaagttagtgacagtggaaatctccgaagagctctatgcagattcattcacattgat
cagccattagctcaaatcctgtcaacactcgattcattggcagcaaaagtttcacgtcta
gagcttattgaccagcagttggaatgtctttacacatcatatcctcaaatgctagacttc
gtcgcaagcctcgttgaaagttcacctgaggaaaaactcatcaagagcttccttttgagt
cacatacgcaacacaattgaaatgcagagatcagatattcagctcgtacacgacggattt
tgcactctaaacatggagatgcgacggaaaaaagaactgtattatttggaagttgtgcac
acgtatttcaacgaatgcgcatatcatcagcaattatatttaaagttgcgtacactgagg
ccatgcagctatataaaaagatgtttcagaaatctaaagcaaaactttacgaaagaaaca
tgcagttcttgcatcactacgcctttgggatggggtacgacaggactttggtacgcgaaa
agttgcgtcactggcactatatcaaagggtcggaaaacagcggtcagcctggttcgcaaa
gcagcaatcaaagggattacatttgtcacacctgaaattggaaaaatgttgggcatgctt
tcagcaattagcattcttctaactatagcgaactcagcacatagaatgatttgcaggaag
cggcttgaagctcgtagattagcactcgaaaaggaggacttgctacttgacataattgcc
aaggagatggtggattactgcactgtgcacaaactgctatacactaaagagctagactac
acacaatttgttgactggctcgaaaagaagcacgcggaggcagggaaactcgcgcacaga
ttatttcttgaggaagttgagcaccaggcaaaagacacaaatcacatctggacagagaag
tgcattgcaacctttgtgctagttatgatgatgtttgacacggatcgtagcgacaaactg
tattcaacgttaaataaactcaagggcgtcttttcaacaattggacaggatgcagtgtat
caccaaagcctggacgacatcatggacacggacgcagccaagaatgcgacaatcgatttc
atcagggaggaggaaatggaaccaaagaaaccaatcctcagtcaaacattcgaacaattt
tgggatactcaaatcactcagaacaggacaatacctcattacagaacagttgggactctc
ttagaaatgaccagagaaacagcacttgacacggtgaatactatcacaaaagctgcaatt
ggatctgaatttatagtgcgtggcggtgttgggacaggcaaatcaacatatcttccgtcg
ctcatctctgaaagaggaagaattttgattttggaaccaacccggccattgaccgagaac
gtcgcagagcaactcagaggtgaaccacactataagagtccaacagtgatgatgagaggt
ctaagcgtctttggatctagccccatcacggttatgacaagcggatttgctctccatttt
tatgccaataacagaacaatgcttaaggaattcagttatatcatgattgatgagtgccac
gttatggacgctgacgccatgacattctattcactgtgcaaagacattggaataactgcc
aagattctaaaagtatccgctactccaccaggacgtgaatgcgatgcgaaaccgatcttt
cccgtcaaaatgaccatttgtgagcagctaacattcgaaggttttgtgaatgcacaagga
actggttcagctaatgatgcaacagtgcttggacacgacatattagtttatgttgcgagc
tacaatgaagttgaccgattatcatcacttctaacgaataaagggtttgctgtcacgaag
gtggatggtcggacaatgaagctacacaatgggccaattcccatgattgggcactcagga
aagaagcatttcattgttgcgaccaacatcattgaaaatggcgtcaccctcgcagtcgat
tatctggttgattttggaacaaaggtcgtcgccgagctggacatggatgggaggcgcatc
gcgtattcgaagtgcccaatttcatttggagaacgcatccagcgaattggtcgcgttgga
aggattaaacctggaggagctttgcgcataggagagacaaagaaaggaattccggaaata
ccagagtcaattgccactacagcagccttcaactgctttttgtatgacctcccggttatg
acaggacaagtatcgctgaatgtgctctctcggtgtacccgtgagcaagcgcgaaccatg
gcggcattcgaaatttcaccattcgctatggcacccttgacagcatatgatggatctatg
cacccagcagtacacagtgttctgaagcgatataaactaagggaatcagagattaagcta
aaacgctcttcgcttcctttgaggtcttcaagttcttggttcacagtgcgtgagtatgaa
acattcgccgggacaattttgatagataataaggatgtcaagattccattcctcattaac
aacatcccgcataaggtttttgaagaattgtggactgcaataatgaacaacaaggcagat
gttacaacaatgagcatctcaacaattcaatctcaaaagatcgcctacacattgcaaaca
gattccacctcattgcaaagaactatcacgacaattgacatgttaattgcagaggagcaa
agaaagaagcagatgttcgccgcatatacagccaattcctctggtggctttatggtaagt
ctcagcgcgatagcacaatgtctgaaatcccgatgggcgcgtgacttctgtgaccataat
ctacacactctaattgaaactcgaaatcagttgtgtgagttcgaaaatcttgcagttgaa
agatacacagaagacattatcaggaattacccttgcgttactcttgtagaacaccaaagc
cgtgatgaaatgatacaaaaactacaattgaaggctaagtacgacaaccgcttgatcgct
accgacttggctttaacagccggcacgctaatcggcggtggcgttatgctctacaagtac
gtgatgaatgccgttgacgaacaagtcacgttcgaaggtgatagcaagcgagcacgacaa
aagcttcaattcaagcaaggaagggcaaacaaggaatacaacgaagtttatgcggatgag
gacacgattcgtgagaatttcggtgaagcttacactaagaaggggagaaaaggagcaaac
ttcactaagggtactggcaagaagactcacgaattcacacacttctatggaattgatcca
acacagtatgaactcgttagatacattgatcctctcactggctacacaatcgatgtgaat
gcgcaacaagctgtcaacgctagatctttggagcaagcatttattgatgagagagagaac
ctgcatgaggagtctttgttagctccaggagccacattcatacctagtgatctgcaggcg
tatttcatcaatacgcaaacacgacgagctcttcgagtggatcttgagccgcataatcct
atgcgagttgggcacaggactaacaacatcgcaggcttcccagatagagaaggtgagttt
agacaatcacgcccagcgagaccagtcaacatatcgcaaataccagacaagaaggacagt
tgtgtggctcatgaaagcaaatctcatctctgtggtgtccgcgattacactttcgtatcc
aaagtcatttgtagcttggagtactattttgacgacatggttcgatgtttgtatggaatt
tgctacgacacgttcatcatagccaatgcccatttaattccaaaaccaaatggttggctc
aaaattaaaacaaagcatggaattttcacggtgcaaaacatgcagaagctcaagattaag
gaaatcaaagggacggacttaattgtgatcacatgccctaaggacatgcaaccggctcca
tgtcggctcaagtttcgggcaccacgaaaaggtgaaaaggtcgtcatgattagcaccacg
tctaatgattcatcaggcgtcccaatggtctcggaagcaagcgtgacaactcacaagccg
aacacaaacttctggattcactggatctcaactaagcgcgggcactgtggcttgccgata
gtttcactagatgatcaatgcatcctcggtcttcacagtctcggttcagttcacgtcaaa
gacaattattacgccatcttcggtgataactttgtcagcgagaatttgctaaatacgagt
cccggtgactggatgagcagatggtcttacaatccagacaatatcgactggggaacgatg
gatcttaaaatgagcaaaccaggaggtagcttcaaaaccacgaaagatatcactgatata
gacactgacgttgaacatcaacacaatcagtacacatggttaaccaagtacattggtggc
aaccttgcagctgttgcaaagtgtcctggaaatctcatcacaaagcatgttgtgaaaggg
agaagcccaacgttttccctatacctgtcggttgatgaggaggcaaatgcattctttaaa
cccttgttatcacactatagcccaagcagactaaacaaagaagcctttgtcaaggacgtc
acaaagtacgataagttaatatcagttggagacgtcgacattgaatgctttgtgcaatca
gtgcaatctgttttcaatttgctatctcgacttggctttcaggagtgcgcctatatcacc
gatgctgaggaaatattcgcgtctttgaacatgaaagcggcagttggagctctttatggc
ggtaagaaggagacatacttctcggacttctccaacgaagacaagcagcaaatcctcaaa
gagagttatgaacgcttgtatgaaggaaagtttggtgtatggaacggatcgttgaaagct
gagcttagaccaaatgcaaaggttgaagcgaacaaaacccgagtcttcacagcagcacct
ctggacacacttcttgcagcgaagggttgtgttgacgacttcaacaaccaattctatagc
aagcacctcgaaggcccgtggacggtgggaatcacaaaattcaaaggccgatggaacgat
tttcttcgtctcttaccggatgggtggatctattgcgatgcggatggttctcaatttgat
agctcattaactccttatctcataaacgccattctcaatgttcgattgcagttcatgcag
gaatggaacattggaaagagatgtttggagaacctctacactgaaattgtctacacagcc
atagcaactccagatgggtcagtcattaagaagttcagagggaacaatagcggacagcca
tcaacagtcgttgacaatacattaatggttgtcttagctatgcaatacgctatagcaaaa
catggtcttagtccagagtcaacggatagctttatccggtactttgctaacggtgatgat
ttggttatagcaattgctccagaaaaagttgatctactagacacgcttgcacagagcttc
ggcgaacttggtctaaattatgacttctcatcaagggttgagaaacgagaagacctttgg
ttcatgtcgcatcaaggaaaactcatcaacgacatgtacatacctatgctcgaaagggaa
cgggttgtagccatattggagtgggaccgaagtcatgagcctgagtttcaaatggatgca
attaatgctgcaataattgaatcctggggagacgatgagttgatatatcaagttcgaaag
tattacaattggctgctcgagcaagaaccatacaaatcccttgcagatgctggaaaggct
ccttaccttgcagagacagcactcacaaagttgtatacagatgtcgatgcctcccaagag
attttggatctgtaccagaattgtgttattgaacttccacaatttgatgagccaactctt
gtgtatcacgaagcagacgaccaacaaaattctcaggacaatccttcaagtgaggataac
aagacaaacccgcaaacaggagatggacaacgaaccccagcagctgatcaacaacaaaat
agaaccaatacggaaaatactgagaatcaacaaaacgcagccaaccagcagcgaaatcga
acaacggagaacgcccaaaaagcggccaacgatgacaaatcaaagcagttggcaaaagca
cagtcgaaagaagttgttcggcaaaacaatgaaaagcgagcgatgaactctggtggtgat
gatgcggatgtcacgattaaggatgaaacgaagacttttgtcataccaaaggttgaggtt
ttgaacaagaagctccgcatgccgaaatttaaagggaaagccatggtaaatgtagatcat
ttattggtttacaaaccggatcagagggatctttccaacaaacgtgcaacccagagacaa
gtggataactgggttgaaaaggtggcgaaagactatggtgttgaagaatctagcatggac
ataataataaatggtttcatggtttgggctcttgataatgggacttccccaaacatcacg
ggcacttggatcatgatggacaaagaggaacaacgcgaatatccgattgaaccacttgtt
cgccatgctcaaccaacgctgcgtcaaattatgatgcatcttagtgacacagcgactggc
tacatagttttacgtaacactaaagaaaggtatatgcctgggtatggattaaagcgtaat
cttaatgatatgagcttagctccatatgccttcgacttctatgaaataacatccgaaact
ccaaatcgtgtgcgtgaggcgcacttgcagatgaaggccgcagctattcgcggcaaagtc
aataggactttcggactcgatggtactgtttctagtggaagtgaggacactgaacgtcac
acggttgacgatgtcaagcatggtactcattcattctacggagctggaatgaattga
DBGET
integrated database retrieval system
