Viruses: 2943478
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Entry
2943478 CDS
T40000
Symbol
HJLVs2gp1
Name
(RefSeq) Humulus japonicus latent virus; p2 protein
KO
K26630
Ilarvirus RNA-directed RNA polymerase
Virus
269213
Humulus japonicus latent virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
RdRP_3
Motif
Other DBs
NCBI-GeneID:
2943478
NCBI-ProteinID:
YP_054423
RS:
NC_006065
UniProt:
Q6JE41
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Position
NC_006065:45..2606
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AA seq
853 aa
AA seq
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MASFKDIVNALFASAQQKLGLSVPLLTGDKIIVNMPSNQKKKMELVAVPLLRENVRFSRE
TLVVFLRHPCLANMLNQWEFWAWEFNEELLPYGCSVTRVKDICVDGPYEDKSGYFHGSYT
YAENSVYVDDYQVELCPLDDNMPPESVYEEGECSSKYQEVPPCEDVNLDGEEGENVGLLD
MPEKDFQSLMHTRLQHLRDVGCSINLSGRGIPVIPIVAGGFSETTRLNPRHAESERVFKD
RLEGPELKWAGPVFKDNLRAHSVDDMDVREWVAINRPIPKKKLPMKISGSIDAPLLNVRE
VSPVLNLVNNYIPKYQMLDWHALAKFINNYQAKEKPMDIKITSRGFANRHVFQQALDEIL
PHHHKFDDSFFQTMVECDDISIELSRCRLDLSVFNSWEKGSNKVKPMINSGVANRRFSTQ
REAMLAVQKRNMNVPNLAHCTDIPAVVAEVVDKFFKVIIDPDKLSQFPGFISEGELAYFE
DYLRGKQPDPEMLKDPLCFQRLDKYRHMMKNNMKPVEDHSLNSERALMSTITYHEKGTIM
STSPIFLMAANRILMCLSDKVKIPTGKYHQLFSLDAHVLKHVKHWKEIDFSKFDKSQGEL
HHYLQREIFIRIGVPMNFIDAWVPQVTRSFISDPSNGLFFNVDFQRRTGDACTYLGNTLV
TLCVLCHVYDLGDANVLSVVASGDDCLIGSYEKLDQSREYLCSTLFNFEAKFPYNQPFIC
SKFLIIAEMMDGREEVIAVPNPIKLLIKLGSKLNPEDFDEWFLAWRDHIHYFQNAHIVDQ
IVDLVEVRTGVRNTQCLRLALESFPHVFRSKKAVMREFFCMEEIESIERNRQIKAIKALN
KKFKLPRSTTHVC
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttcaaggatattgtaaatgccttgtttgcgtcagcgcaacaaaagttgggt
ttatctgtaccactgcttaccggtgataaaattattgttaatatgccttctaaccaaaaa
aaaaaaatggaattggttgccgtgcctcttttgcgggaaaatgtacgcttttctagggaa
actcttgttgtgtttcttagacacccatgcttggctaacatgctcaatcaatgggaattt
tgggcgtgggagtttaatgaagagttgttaccatatggctgttctgtgaccagagttaaa
gatatctgtgtcgacgggccttatgaagataaatccggatattttcacggatcttacacg
tatgccgaaaattcagtttacgtcgatgattatcaagtggaattgtgtccactggatgat
aatatgcctcccgaatctgtttatgaagagggagagtgttcttctaaataccaagaagtg
ccaccatgcgaggatgttaatctcgatggtgaagaaggagaaaatgtcggacttctggat
atgcctgagaaagattttcaatctctcatgcataccagattacaacatttgagggacgtt
ggttgttcgattaacctaagcggtaggggaattcccgtgattcctatagtagccggaggg
tttagcgaaaccacacgtttaaatcccagacatgccgagtcggaaagagtttttaaagat
agactcgaaggaccggagctgaagtgggctggacctgtctttaaagataatctccgtgcc
catagtgttgatgatatggatgtccgggagtgggtggctatcaacagacccattcccaag
aagaagttaccgatgaaaatttcaggttccattgatgcccctttgttaaatgtaagggaa
gtttcacctgtcctgaatttggtgaataactatattcccaaatatcagatgctggattgg
cacgctcttgcaaaattcatcaataattatcaagccaaagaaaaaccaatggatattaag
atcacatctaggggatttgccaatcggcatgtcttccaacaagcactagatgagatctta
ccacaccatcataagtttgatgattcgttctttcaaactatggtggagtgtgatgatatt
tccatagaattatctagatgccggttagacttatccgtcttcaattcttgggagaagggt
agtaataaagtaaaaccgatgataaactctggtgtcgccaatcgacgcttcagtacacag
cgggaggctatgttggctgttcaaaaaaggaatatgaacgtacctaatttagcgcattgt
actgatataccagccgtagtggctgaggtggttgacaaattttttaaggtcattattgat
cctgataaattgtcccagtttccagggtttatttccgaaggagaattagcatacttcgag
gattaccttcggggaaagcaaccagacccggagatgttgaaagatccgctctgttttcag
aggttagataaataccggcatatgatgaaaaataacatgaaaccggtagaggatcattcg
ctcaattcagagcgtgctctcatgagtactataacataccatgagaaagggacaataatg
tccacttcacccatcttcctaatggctgctaatagaatattgatgtgtttaagtgataag
gttaaaatcccgactggtaagtatcatcaattattctctttagatgcccatgtgttgaaa
catgttaaacactggaaggagattgacttctcaaaatttgataaatctcagggtgaattg
catcattatttgcaaagagagatttttatcagaattggagtgcctatgaatttcatagat
gcatgggttccacaagtcacgagatctttcatttcagatccatctaacggattgttcttt
aatgttgatttccaaaggcgtactggcgatgcgtgtacctacctgggaaacactttagtc
acactttgtgtcttatgccatgtttacgatcttggcgatgcaaatgtgctatcggtcgta
gcctcaggagatgattgcctgataggaagttatgaaaagttggatcaaagtagagaatac
ttatgttcaacacttttcaacttcgaggcgaagttcccttacaatcaaccatttatctgc
tctaagtttcttattatagcagaaatgatggatggtagggaggaagtcattgctgttcca
aacccaataaaattattgataaagttgggcagcaaattgaatcctgaagattttgatgaa
tggtttttagcttggcgtgatcacattcattattttcaaaatgcccacatagtagatcaa
atagtagatctagtggaagttcgcactggagtgcgtaatacccaatgcttgcgcttagcg
cttgagagtttcccgcatgtattcagatcaaagaaggctgttatgcgcgaattcttttgc
atggaagaaatagagagtatcgagaggaatcgccaaataaaggcgattaaagctttaaac
aaaaagtttaagttgcctcgatcaacgacacatgtttgttga
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