Viruses: 2948564
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Entry
2948564 CDS
T40000
Symbol
ORF56, EhV1gORF56
Name
(RefSeq) Equid alphaherpesvirus 1; capsid portal protein
KO
K26020
Herpesviridae portal protein
Virus
10326
Equid alphaherpesvirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL6
CENPU
Motif
Other DBs
NCBI-GeneID:
2948564
NCBI-ProteinID:
YP_053100
RS:
NC_001491
UniProt:
P28944
P84458
A0A0A7D9M5
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Position
NC_001491:complement(100130..102391)
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AA seq
753 aa
AA seq
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MSADSIEPKQKRLRYADANKGRKVERKNTPRFEATTGLQSPGEEEQISADGGWVLIHPTP
KTMLFKEILMGELGYTEGQGVYNAIRSTEAAIRQIQTTILTNTLNATRYEDLAKDWQTHL
DSRGVSAEEIAATYGMYSEGEAVRVAEQIFATWHRTLQMSLLDFVRSITACFSASEPDGT
ASFAKYIDWIACLGLIPLQRLKRAPGATVHPKLWRKLPTDVPSLESCVDERDLAGKLYVA
NSLLREGLEAVVELARCTASVAIMDYDRVNIFYHYTRREVVAIDSTTGKRGECLVLWQPI
WKDGSVLFDSPLQRICGEVCNCHALREHAKLCQLLNTVPVKILVGRKKDEAQGPGWASKA
VDKLMGEGEELHSSSAASRLVKLIVNMKSMRHIGDITETVRSYLNETSTNLLSGAQVDTS
LPGFGQSGKTKQGGNMPVQEAFRTSVINGINGMLEGYVNNLFKTIEDLRTGNSGLLDQLR
DRESEITHLREQLLRVSQAAADGSTQPGASSAALPGSGAKSGAGGLGHEVIDIRNLMGDD
GYVANSFQSRYIPAYTADMERLSRLWDQELLRCFKMNRITNNQGQEMSVSYSNSSISLLL
APYFFSILRARHLGFLITHQEAYRSEEELCVAVFKKTRLEAYLTELSTLFVARVRNSIAA
LNSTKRDLPVNDNEAQSDEEQLGKPSDERYYEGRDRSASPQRDRGRNGRGYHKRRRFSNN
YRRRSGLARDSSIRDRSQRGSRPTPLLHDHVGH
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggactccatcgaacccaagcaaaaacgccttcgctatgctgatgcaaacaaa
gggcgaaaggtagagcggaaaaacaccccgcgctttgaggctacaactggcctccagagt
ccgggtgaggaggagcaaatatccgctgatgggggttgggtgcttattcacccaaccccc
aaaacaatgctcttcaaggagatcctcatgggggagctagggtacacagaaggtcaggga
gtatacaacgccattcggtcaactgaggcggctattagacagatacagacgactattctg
accaacacgctcaacgctacgcgctacgaggacctcgccaaggattggcaaacccaccta
gacagccgtggtgtgagcgcggaggaaatagccgccacgtatggaatgtacagcgagggg
gaagcggtgcgagtcgccgaacagatttttgccacgtggcatcgcacgttacagatgtcg
ctcttggactttgttcgcagtataaccgcgtgtttctccgccagcgaacccgacggcacc
gccagctttgccaagtacatagactggatagcctgtctgggtctgattccgctccagcgg
ctcaagcgcgcccccggcgcgaccgtccaccctaagctgtggcggaagctgcccacggac
gttccctcgctggagagctgcgtggacgagcgtgacctggccggtaaactgtatgtggcc
aacagcctcctgcgagaggggttggaggccgtggtggagctggccaggtgcaccgccagc
gtggccatcatggactacgacagggtgaatatattctaccactacacccgcagagaggtg
gtggcgatagactcgaccacgggcaagcggggagagtgtctggtgttgtggcagccaata
tggaaggacggcagcgtgctgttcgactcaccgctacagcgaatctgcggcgaggtgtgt
aactgccacgccctgcgggaacacgcaaaactgtgccagcttctcaacacggtacccgtc
aagattttggtgggcaggaaaaaggacgaggcccagggccctgggtgggcctccaaggcc
gtggacaagctcatgggcgagggagaggagctgcattccagctccgccgcgtcgcggctg
gttaaactcatcgtcaacatgaaaagcatgcggcacataggggacataacagagaccgtt
agatcgtatctaaacgagacgagtaccaatttgctcagcggcgcgcaggtagacacctcc
ctgcccggatttgggcagagcgggaaaaccaaacagggcggcaacatgcccgtgcaagaa
gcctttcgcacgtctgtgatcaacggcattaacgggatgttggagggatacgtaaacaac
ttgtttaagaccatagaggacctgagaaccgggaatagcgggcttttggatcagctccgg
gaccgagagagcgagatcacccacctccgcgaacaactgctgcgcgtctcccaggcggcg
gcagacgggagtacccagcccggtgcgagctcagcggcccttcccgggagtggcgccaag
tccggcgcgggaggactcgggcacgaggttatcgacatcagaaacctaatgggagacgac
ggatacgtggccaatagctttcagtctaggtacataccggcgtacacggccgatatggag
cgcctatctcgtctgtgggatcaggagttgctacgctgtttcaaaatgaacagaataacc
aacaaccaaggtcaggagatgtccgtttcctactccaacagctcaatctccctactgcta
gcgccatactttttctccatcctcagggcacgtcatcttggatttttgattacacaccag
gaggcgtaccgctcggaggaggagctgtgtgtggcggtgttcaaaaaaacccggctcgag
gcttatcttacagagctatctactctctttgtggcgagagttagaaactccatcgcggct
ctcaattccacaaagcgggacctgccagttaacgacaacgaggcccagtctgacgaggag
cagctgggcaaacctagtgatgagcgctactatgagggccgagatcgatccgctagccca
cagcgcgaccgtggacgaaatggtagaggctatcacaaaaggcgacgattcagtaacaac
tatcgtcgacgatctggtctggcacgcgactcctcgattcgtgacagaagtcagagaggt
tccaggcctacccccctccttcacgaccacgtcggtcactga
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