Viruses: 30144440
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Entry
30144440 CDS
T40000
Symbol
BMR73_sLgp1
Name
(RefSeq) Zucchini lethal chlorosis virus; RNA-dependent RNA polymerase
KO
K26280
Tospoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
83872
Zucchini lethal chlorosis virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
L_protein_N
M16C_assoc
Motif
Other DBs
NCBI-GeneID:
30144440
NCBI-ProteinID:
YP_009316178
RS:
NC_031762
UniProt:
A0A1I9SFE6
LinkDB
All DBs
Position
NC_031762:complement(223..8853)
Genome browser
AA seq
2876 aa
AA seq
DB search
MNIQKIKRLIENGTTLLLSIEDCVGSNHDLALDLHKRNSEEIPEDIVINNNAKNYETMRE
LIAKITADGEGLNTGIATVDIKKLNELVSLFEQKYLETELARHDIFGELVSRHLRIKPKY
RTEVEIETALREYLEELNKKQCSNKLSDADFERVSKEYVATNATPDNYVVYKESRGSELC
LMIYDWKISVDAKTETKTMEKYYKNVWKSFKDIQVDGKPFLENHPVFISIVILKPIGGMP
ITVTSSRVLQKFEDSPSALHGERVRHARNARLLSIDYVGQISGTTPTVVRNYYANTQKLK
SEVRGILGDDFGSKDVFFSHWTNKYRERDPTEIAYSEDLEKIIDSLATDEISKEEVIHFL
FGNFCFHVETMNDQHIADKFKGYQNACINLKIQPKIDLPELKDHLIKSKEVWDSLYLKHL
DKILSRVKTKKEKEKEIPDITTAFNLNAIEYEEKYPGCFTNDLSETKTNFSMTWSPNFEK
MEVNADIDYNNAIIKKFRDHLNNPSKVFYNCPYSSITNQTNKARDVTNLARLCLTELSCD
TTKMSKQELEDEIDINTGGIKVERTKKSQEWVKVGKCLTRNKNEFCMREASREEKSIYFK
GLSVMNVGMGAKKKVLKRQEMKEKISQGIEYDTSEKRTDENDDYSTVDVSSLTHMKKLIR
HDNEESLSWCDKIKESLYVLHNGDIRVDGKIAAVYNNYAGNPECLYTQDSVLKEEMDTCK
KINKLCNDLAIYHYSEDMMQFAKGLMVADRYMTKESFKILTTSNTSMILLAFKGDGMNTG
GSGVPYIALHIVDEDMAEQFNICYTKEIYSYFRSGSHYVYIMRPQRLNQVRLLSLFKSPS
KVPVCFSQFVKKASELEKWIRNKDIDNISTFSMTMTAKNILENIVFSSVLIGTVTKISRM
GIFDFMRYAGFLPLSDYSNIKEYIRDKFDPDITNVADTYFVHGIKKLLFRMEDLNLSTNA
KPVVVDHENDIIGGITNLNIKCPITGSTLLTLEDLYNNVYLAIYMMPKSLHNHVHNLTSL
LNVPAEWELKFRKELGFNLHEDIYPKKEMFDDRGLFSINGALNVKALSDYYLENIDNVGL
MRSEIENKEEFLSPCYKISTLKSSKKCSQSNIISNADIIECLQNAKISEIGNWKGNTMAI
MKGVIRTYNEERNRLVDFLEDNCDSPLQLLNKIKEVVNSGSVTIGKSMTSKFIRNNHPLT
VETYLKTKLYYRDNITVLKSKKVSEELYDLVKQFHNMMELDMDSIMNLGKGLEGKKHTFL
QMLEFVMSKAKNVEGSVDFLVSVFEKMQRTKMDREIYLMSMKVKMMLYFIEHTFKHVAQN
DPSEAISISGDNKIRALSTLSLDTITSYNDILNKNKSKSRLAFLSADQSKWSASDLTYKY
VLAIILNPVLTSGEACLMIECMLMYVKLKKVCIPTDIFLNLKKAQETYGQNETAIGLLTK
GLTTNTYPVSMNWLQGNLNYLSSVYHSCAMKAYHKTLECYKNCDFQTRWIVHSDDNATSL
IANGKVDDMLTDFSSSSLPEMLFRSIEAHFKSFCITLNPKKSYASSSEVEFISERIVNGA
IIPLYCRHLANCCTESSHISYFDDLMSLSIHITMLLRKGCPNEVIPFAYGAIQVQALSLY
SMLPGEVNDSIRIFKKLGVSLSSNEIPTSMGGWLTSPIEPLSILGPSSNDQIIYYNVIRD
FLNKKSLEEVKDCVSSFGYLQMRFNELEEKHKKGTLEEKDNKMIFLINLFEKASVSEDSD
VLTIGMKFQTMLTQIIKLPQFINENALNKMSSYKDFAKLYPSLKKNEDLYRSTKNVRLDE
EMIIDEDRLYDAISSSIEMEAVHTIMIENPETILIAPLNDRDFLLSQLFMYTSPSKRNQL
SSQSTEKLALDRVLRSKARTFVDTDSNVKMTYDENMEKKIKEMMKFEPGSYCSFKTCINL
VVKDVNFSMLVPILDSAYPCESRKRDNYNFRWFQTEKWIPVVEGSPGLVVMHAVYGSNYI
EKLGLKNIPLTDDSINVLTSTFGTNLLMDDVKSFVAGNGSFETENFSNSSNCQRLVKACN
YMITAQNRLLAINTCFSRKSFPFYSKFNLGRGFVSNTLALLSTIYSKEESYHFVSTASYK
LDKTIRTVISAQQDLNLEKILDTAVYISDKLQSLFPTITWKDVKLILENVCLDSRPIWQS
LEEKMRKINNSTKSGYTVSNVILSHNSELNTIQKQIVWLWNMGLCSDRTLDFVIRYIRRS
DVRYVKTEEQDELGNYISGTMYKIGIMTRSCYVQLIASDQDVAVSLKTPFEILNERDFLF
DTYRESIEKLLQKFMFDKTNIIKSKQTHITFLEPGDACIRMTSDNKMIVKVNASPRQIRM
ENVKLVVKIKYENVNSDVWEIIESQKSLVLRYPETGECFSDMYKTVDSEAEAIKTIKSKL
MTSLTFIEAFGNFSKQINEIVDETVRETMHDFLMNIRDTCLEGLENCKSIEEYDEFLDDN
GFNDTVELFEDLLRTQDSFENEYSPLFSEIVDRAKQYTRDLNGFKEILLMLKYSLINDAS
GFKSYRATGSHATDLMMKKHIEIGEFNLLGMIQLIKACETCHNNDSILNLASLRNVLSKT
YATFGRRLVLNHDLDLQNDLMEKSYDFKTLVLPEIQLSDFSKEILKGNGFVVSGENLKID
KSADEFEGLASFNALRLDEEEMYEGLIKEMKIKRKKKGFLFPANTLLLSELIKFLIGGIK
GTSFDIETLLRNCFRPNIYSRDRLSRLSSSVPALRVYSTVFMEYKDVNCPLSEIADSLEG
FLKLTKSKSREQFLDGRVKKALIQLRDEQSREKKLEVYKDIAEFLSRHPLCLSEKTLYGR
YTYQDINDYIMQTREIILTKINELDESMEDDDDNFLLSYLKGEEEALDEDEVDYSD
NT seq
8631 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcagaaaataaaaagactaatagagaatggaaccacattactgttgtctatt
gaagattgtgtcggatccaaccatgatctagctttagacctgcataagagaaatagtgag
gagattccagaagatattgtgatcaacaacaatgctaaaaattatgaaactatgagagag
ttgatagcaaagataactgctgatggggaaggattaaacaccggtattgctacagttgat
attaaaaaactaaatgagctagtttctttgttcgaacaaaaataccttgaaacagagtta
gcaaggcacgacatctttggtgagctggtgtcaaggcatctgagaatcaagcccaaatac
aggactgaagtggaaattgaaacagctttgcgtgagtatttggaagaactgaacaagaag
cagtgttcaaacaaactttctgatgcggactttgaaagagtgagtaaagagtacgtagcc
accaatgctacaccagacaattatgtggtctataaggaatcccgaggaagtgaactttgt
ctcatgatctacgattggaagatatcagttgatgccaaaacagaaaccaaaacaatggag
aaatattacaaaaatgtctggaagtcttttaaagacattcaagttgatggaaagcctttc
ttagaaaaccaccctgtatttatctccattgttatcctaaaaccaatcggaggcatgccc
ataactgtaaccagtagcagagttcttcagaagtttgaggactcaccatctgcattgcat
ggtgaaagagtgaggcatgcaagaaatgctaggttgctgagtatagattatgttggacaa
atatctggaacaacaccaacagttgttcggaattactatgcaaacacgcaaaagctgaag
tcagaagtcagagggatcttgggtgatgactttggatccaaagatgtgttcttcagccat
tggacaaacaaatacagagaaagagatcctacagaaatagcctattctgaagatttagag
aaaatcatagactctctggctacagatgagatttccaaagaggaagtgatacatttcttg
tttggtaatttttgtttccatgtggaaacaatgaatgatcaacacatagcagacaaattc
aaaggatatcaaaatgcttgcatcaacttgaaaatacagcccaagatagatctgcctgag
ttaaaagaccacttaataaaatcaaaggaagtgtgggattctctgtatttaaagcactta
gacaaaattctgtctagggttaaaaccaagaaagaaaaagaaaaagaaatccccgacata
acaactgctttcaacttaaatgctatagaatatgaggaaaaatacccaggttgttttacc
aatgatctgtctgagactaagacaaatttctccatgacctggtcacctaattttgagaaa
atggaagtcaatgcagacattgattacaataatgctattataaagaagtttagagatcat
ctcaacaatccttcaaaagtgttttacaactgtccttatagttccatcacaaaccaaacc
aataaagcaagagatgtaacaaacttagctagactatgtctgactgagctaagttgtgat
acaacaaaaatgagcaaacaagaactagaagatgagattgatataaacactggcgggatc
aaagttgaaagaacaaaaaaatcccaagaatgggtcaaggtaggcaagtgcttaactcga
aacaaaaatgaattttgcatgagagaagctagcagagaagaaaagagtatctattttaaa
ggtctatctgtcatgaacgtaggaatgggtgccaagaagaaagtgctaaagagacaagag
atgaaagaaaagatttctcaagggatagagtatgatacatcggaaaagagaacagatgag
aatgacgattattctacagtagatgtatcttctcttactcatatgaaaaaattgataaga
catgataacgaggagagcttgagttggtgtgacaaaataaaagaatctttgtatgttctc
cacaatggtgatataagagtagatggcaaaatagctgctgtttacaacaactatgctgga
aatccagaatgcttatacactcaagattctgtgctaaaagaagagatggatacatgcaaa
aagattaacaaattgtgcaatgacttggctatttatcattattcagaagacatgatgcag
tttgcgaaaggtctaatggtggcagacagatatatgactaaagaaagctttaaaattctc
acaacttccaacacaagcatgattttactagcgtttaaaggtgacgggatgaatacagga
ggctcaggagtgccatacatagctttacacatagtagatgaagacatggctgaacaattt
aatatctgttacacaaaagaaatatatagctatttcagaagtggcagccattatgtttac
ataatgagaccccagagactgaatcaagttagattactaagtcttttcaagtccccgagc
aaggttccagtatgtttttctcaatttgtaaaaaaagctagcgaactggaaaagtggata
agaaacaaagatatagacaacataagtacattttccatgactatgactgccaaaaatata
ttggaaaacattgtgttttcttccgtactaataggaactgtgacaaaaatcagcagaatg
ggaatcttcgacttcatgaggtatgccgggttccttcccttgtcagattactccaatata
aaagagtacattcgagataagtttgaccctgacattacaaatgtagctgacacatatttt
gttcatggcataaaaaagcttttgttcagaatggaagatcttaatttaagcacaaacgca
aaaccggttgttgttgatcatgagaatgatatcattggtggaatcacaaatttaaacata
aaatgtcctataacaggatccactttactcactttagaggatctatataataatgtttat
ttggctatttacatgatgccaaaatcactccacaaccatgtccacaacttaacaagtttg
ttaaatgttcctgccgaatgggagttgaaattccggaaagaattaggattcaatttgcac
gaagacatctatcccaaaaaagaaatgtttgatgatagaggtttgttttccatcaatgga
gctttaaatgttaaagcattatctgactattacctggagaacatagacaatgttggcttg
atgagatctgaaattgaaaataaagaagaatttctaagtccttgctacaaaatatccacc
ttaaagtcttctaaaaagtgctcacaatcaaatataattagcaatgcagacataatcgag
tgcctacaaaatgcaaaaatcagtgaaatcgggaactggaaagggaacactatggcaata
atgaaaggagtcataagaacttacaatgaagaaagaaacaggctagtagattttcttgaa
gataactgtgacagtcctcttcaacttttaaataagataaaagaagtggttaactcagga
tcagttactatagggaaatctatgacttccaaatttattagaaataaccaccctttaact
gtagagacatatcttaaaactaaactatactacagagacaatataacagtgctgaagtcc
aaaaaagtatcagaagaactttatgacctagtgaagcagtttcataacatgatggaatta
gatatggactctatcatgaacttagggaagggtttggaaggaaagaaacatacatttctc
cagatgctagagtttgtcatgtccaaagctaaaaatgtggaaggttctgttgatttccta
gtatcagtgtttgaaaagatgcaaaggacgaagatggacagagaaatttatttaatgagc
atgaaagtcaagatgatgctttactttatagagcacactttcaagcatgttgctcagaat
gacccatctgaagctatctctataagtggagacaacaaaataagagctttgtccactttg
tcattggacacaatcacttcttacaatgacattttaaataagaacaagtctaaatcaagg
cttgcattcttatctgctgaccaatcgaaatggtctgcttcagatttaacatataaatat
gtattagctataattctaaaccctgtgctgacatccggggaagcatgcttaatgatcgag
tgtatgttaatgtatgtcaaactgaagaaagtttgtattcccacagatattttcttaaat
ctcaaaaaggctcaagagacttatggacaaaatgaaactgccataggattgctgacaaaa
ggattaacaactaatacatatccagtcagcatgaactggcttcaaggaaacctgaactac
ctgtcatctgtatatcattcatgtgcaatgaaggcatatcataagactcttgaatgctat
aaaaactgtgatttccaaaccagatggatagtacattcagatgataatgctacatctctt
atagccaatggcaaagttgatgacatgctaacagacttctcaagctcatctctgccagaa
atgttattcagaagcattgaagctcattttaaaagtttctgtataactttaaatccgaaa
aaaagctatgcatcatcatcagaagtagaatttatatcagaaagaatagttaatggggct
ataataccattatattgcagacatctggcaaactgttgcacagagtcttcacatataagc
tactttgatgacttaatgtctctaagcattcacataactatgcttttgaggaaaggatgc
cccaatgaagttataccttttgcctatggagccatccaagtgcaagcattgagtttgtac
tcaatgcttccaggagaggtaaatgatagcattcgaatatttaaaaagctaggtgtgagc
ttgagttcaaatgaaatccctacaagcatgggggggtggttgacatctcctatagagcca
ttgtcaatcttgggaccatcctctaatgaccaaattatctattataacgtgatcagagat
ttcttaaataagaaaagccttgaagaggttaaagattgtgtttcatctttcggttacctc
caaatgcgattcaatgagctagaagagaagcacaagaaaggaacattggaagaaaaagat
aataaaatgattttcttgataaatctctttgagaaagcatctgtgtcagaggactccgat
gtgctgactataggaatgaaattccaaaccatgttgactcaaataataaagttgccgcaa
ttcataaacgaaaatgctttaaataaaatgtccagttataaggattttgccaagctatat
cccagtttaaagaaaaatgaagatctatacagaagcacaaaaaatgtgagattagatgaa
gaaatgataatagatgaagataggttatatgatgcaatctcttcaagcatagagatggaa
gctgtccacactattatgatagaaaatcctgagactattttaatagcacctctaaatgac
agagactttttgttgagtcaactttttatgtacaccagcccttctaaaagaaatcaactg
tccagccaatcaacagagaaactagctcttgacagagttttacgatccaaggctaggacg
ttcgtggacactgattcgaatgttaaaatgacttatgatgaaaatatggaaaaaaagatc
aaagaaatgatgaagtttgagccaggttcatactgctcctttaagacatgcataaacctt
gttgtaaaggatgtgaacttcagcatgctagttcctatattagattctgcttacccttgt
gaatcaaggaaaagggataattataatttcagatggtttcaaacagaaaagtggattcct
gtagttgaaggatctccaggtttagttgttatgcatgctgtgtatggttcaaactatatc
gaaaaactaggtttaaagaacatcccgttaactgatgacagcataaatgtcttaacaagt
acatttgggacaaatttactaatggatgatgtaaaatcttttgtagcaggcaatggaagt
ttcgaaacagaaaattttagcaactctagcaactgccaaagactggtgaaagcatgtaat
tacatgatcacagctcaaaacagattattagcaatcaatacatgcttttccagaaaaagt
ttccctttttattctaaattcaacttaggaagaggctttgtatcaaacaccttagcattg
ctctctacaatttatagtaaagaagaatcatatcattttgtttctactgctagctacaaa
ttagataaaactataaggacagttatcagtgcacaacaagatttgaatttggaaaaaata
ttggacacagcagtatacatatctgataaattacaatctttatttcccacaataacttgg
aaagacgtgaaattgattttagagaatgtttgcttagatagtagaccaatatggcaaagc
ttggaagagaaaatgaggaaaatcaacaactcaactaagagtggctacacagtatctaat
gtgattttgtctcacaatagtgagcttaatacaatccagaagcaaattgtctggttatgg
aacatggggctttgttctgatagaacattagactttgtgatacggtatattcggaggagt
gatgtacgatatgtgaaaaccgaggaacaggacgaactagggaactacatctcaggcacc
atgtacaaaatcgggataatgacgagaagctgttatgtccagttgatagcctcagatcaa
gatgttgctgtgtcattgaaaacaccatttgagatattaaacgaaagagattttcttttt
gacacatatagagaaagcattgaaaagttgttacaaaaattcatgtttgataaaacaaac
ataataaaatccaaacaaacacacataactttccttgaaccaggcgatgcttgtatcaga
atgacatcagacaacaaaatgatagtaaaagttaatgcttctcctaggcagatcagaatg
gagaatgtaaagttggtagtaaaaatcaagtatgagaatgtaaattccgatgtttgggaa
atcatagaaagccagaaatcgttggttctgcgatatcctgaaacaggagaatgcttttca
gacatgtacaagactgtagattcagaggctgaagcaattaagactattaagagcaagttg
atgacatctttaacatttattgaagcatttgggaatttttcaaagcagataaatgagatt
gtagatgagacagttagagaaacaatgcatgactttctaatgaacattagagacacctgt
ttagaaggtttagagaattgcaaaagcattgaagaatatgatgaatttctagatgacaat
gggtttaatgatactgtagaattattcgaagatcttttgagaacccaagatagttttgag
aacgaatacagtcctttattttctgagattgtagatcgagcaaagcagtacactagagat
ttaaatggttttaaggagatacttttaatgcttaaatattctttaatcaatgatgcctct
ggattcaaaagctacagagctacaggatcacatgctacggatctaatgatgaaaaagcac
atagagataggcgaatttaatctcctaggcatgatacaactaattaaagcttgcgaaaca
tgtcacaacaacgattctatattaaaccttgctagtttaagaaacgtattaagcaaaact
tatgcaacttttgggagaaggttagtgttaaaccatgacttagatttacagaatgatttg
atggaaaaaagttacgattttaagacattggtactaccagaaatacaactctcagacttt
tctaaagagatattgaaaggaaacgggtttgttgtttctggtgagaacctgaaaatagac
aagtctgcagatgagtttgagggtttggccagcttcaatgctttaagattagatgaagaa
gagatgtatgaaggtctgataaaggagatgaaaataaaaaggaaaaagaaagggtttttg
ttccctgccaatacattacttttgagcgagttgataaaattcttgatcggaggtattaaa
gggacaagctttgacattgaaacacttcttagaaattgcttcagaccaaacatatattca
agagataggttgagccggttaagttctagtgttccagcacttagagtttactcaacagtt
tttatggaatacaaggacgtcaactgccctttgagtgagattgctgacagcttggaaggg
ttcctaaaactgacaaaaagcaaatcaagagaacagttcttagatggaagagtcaagaaa
gcattaatccagctgagagacgagcaatctagagagaaaaaattggaagtgtacaaagac
atagctgaattcttgtcaaggcatcccttgtgtttgtcagaaaagacactatatggcaga
tatacatatcaagatataaatgactacataatgcagaccagagaaattattttgaccaag
ataaatgagctagatgagtctatggaagatgatgatgataactttttattgagttacctg
aaaggagaggaagaggcattagacgaggatgaagtagattattctgattga
DBGET
integrated database retrieval system
