Viruses: 3021798
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Entry
3021798 CDS
T40000
Symbol
p2, CtRLVgp2
Name
(RefSeq) Carrot red leaf virus; RNA-dependent RNA polymerase
Virus
66200
Carrot red leaf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_4
Peptidase_S39
Trypsin
Motif
Other DBs
NCBI-GeneID:
3021798
NCBI-ProteinID:
YP_077186
RS:
NC_006265
UniProt:
Q670I5
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Position
NC_006265:join(159..1529,1529..3295)
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AA seq
1045 aa
AA seq
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MSSRVFMAIFLVLCYISCPAFSTMTTKWAGLPSGASQIIFANLSYGDLFVDSTPEYKIGE
GEVTGLTYKDSGIAELTSHSYTGLMGAILAKIYSDVQKPFSPLWKISLERLESFTKSGIE
LSHTLIESCLWTVVTIWLAAYSMIARLGWSLITNFTLPVLALAILCLLTTVICRALIWLY
SQLPMFLLTFPWAMIKLVTKLRFRRSKVIKEQACEGYTTFSIPQNPPKHSVVEIIHPDGS
HSGYATCVKLHNGHNGLLTAYHVVSSEGKAVHSLRNGAKIKLDAFKPFFENEFLDISLFQ
GPPSWESALACSSVNMVCVNSLALCEARLFGFEGDQWKSRNAKIIGSYEKQVSVLSNTDK
GDSGSAYFHGKNVVGVHSGYPTDGENFNLMAPIPNIPGLTSNKLVFETTAPQGRVFDDET
LNYFDELCEEYSIEEARYIMQNRRGKNLEGKSQNQGNRATLHRQRNKRRSKHPKDKAREY
YATPSNGGPRRKSNTSSTGGHDGEDLRGSPKPSKHGGHRGENRRESGQAGCGEAQQIPRN
ARWEEDARGFEEYFARIYNWQVPPTSLQVPGFRDVGATPKYYHSKQKEESKWGRKLTEQH
PELAEKTAGFGWPQFGAQAELKSLRLQASRWLDRAQTAKTPSDAQREHVINRTVSAFAAA
QTQTPSFCTKDKLTWPEFLENFKLAVNSLELDAGVGVPFVSYGLRTHRDWVENPKLLPVL
ARMTFDRLQKISEVNFSDMTPEELVQNGLCDPIRLFVKGEPHKQSKLDEGRYRLIMSVSL
LDQLVARVLFQSQNKLEIALWRAVPSKPGFGLSTDNQIENFVDCLAKQVGETPEEVIANW
PKYLIPTDCSGFDWSVSDWLLEDDMEVRNRLTIDCTPLLKRLRAGWLKCISNSVLCLSDG
TLLAQTVPGVQKSGSYNTSSSNSRIRVMAAYHCGASWAMAMGDDALESIDTDLSVYKNLG
FKVEVSAQLEFCSHIFKERNLAIPVNINKMLYKLIHGYNPECGNAEVLSNYLSAVVSVMN
ELRHDPALVSKLFQWLVPSAATKEF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgtgtttttatggcaatcttcctcgtgctctgctatatatcctgccctgca
ttctcaacaatgactacaaaatgggcgggtctgccatctggtgcaagccagattatattc
gcgaacttgtcctatggggacttgtttgtggattctacccccgaatacaaaataggggaa
ggagaggttaccgggttaacttacaaagactcgggaatcgcagagcttacctctcattct
tacacaggcttgatgggcgcaatcttagcgaaaatctactcagacgtccagaagcctttt
tcaccactgtggaagatttctctcgaacgattggagtcttttaccaaatcagggatagag
ctctcgcacactcttatagagagttgcctctggaccgttgtcacgatctggttggcagcc
tattccatgatagcgagactggggtggtcacttataaccaacttcactctacctgtcctt
gcgctggctattctctgcttattaacgacagtgatttgccgtgctctgatttggctctat
tcacagctccctatgttccttttaacgtttccttgggccatgatcaaattggtcaccaag
ttgagattcaggaggagtaaggtgatcaaggaacaagcctgcgagggatacactacattt
tctatcccccaaaaccccccaaaacattccgtggtggaaataattcacccagacggatcc
cactcaggatatgccacctgtgtaaaattgcacaatggccacaatgggcttttaacagct
tatcacgtggtttctagtgaaggtaaggctgtccattcgctccgaaacggtgccaagata
aagttggatgctttcaagcccttctttgaaaatgaattcttggatataagtctgtttcag
gggcctccgagttgggaaagtgccttggcttgctcgagcgtaaacatggtttgcgtaaac
tcgcttgccttgtgcgaagcccgtctcttcggattcgagggggatcaatggaagtccagg
aatgcgaagataatcggaagctatgaaaaacaagtttccgttttgtctaacacggacaag
ggggatagtggttctgcctattttcatggcaagaatgtggtaggggtgcactccggttat
ccaacagacggagaaaattttaatctcatggccccaatccccaacatccccggtttaacc
tccaacaagctggtcttcgaaaccacagctccacagggtcgagtttttgatgatgaaact
ctcaattactttgacgagctctgtgaagagtattcaatagaagaagccagatacataatg
caaaacaggagagggaaaaacctagaagggaaatcccagaaccagggaaaccgagcaacg
ctgcaccgccagcgcaacaaacggcgctccaaacatccaaaagacaaagcgcgtgaatac
tacgccacccccagtaatggaggtccccgtcgaaagtcaaacacctcttccacaggagga
catgatggggaagatcttagaggctctcctaagccgagtaaacatggcggacatcgaggc
gaaaatcgtcgagaaagtggccaagcaggctgtggagaagcacaacaaatcccgcggaac
gcgcggtgggaagaagacgccagaggcttcgaagaatacttcgcaagaatctacaactgg
caagtaccgcccacctcactccaggtccccgggttccgtgacgtcggagcaacccccaaa
tactaccactccaaacaaaaggaggaatcaaaatgggggcggaaactcacggagcagcac
ccagagctggcagagaaaacagccggtttcgggtggccccagttcggggcccaagcagag
ttaaaatctctgcggctgcaagcgtcaaggtggctggaccgtgcccagaccgccaaaact
ccttctgacgcacaaagagagcacgtgattaaccgtacagttagcgccttcgcggctgct
caaactcaaactccgagtttctgtacgaaggacaagttgacatggcccgaatttcttgaa
aattttaagttggccgtcaactctctggaattagacgctggtgtgggagtcccttttgtc
tcttatggcttaaggacacaccgcgattgggttgaaaatcccaagctcctacccgttctc
gcgagaatgacttttgatcgactacagaagatatcagaagttaattttagcgacatgaca
ccggaggagctagttcaaaacgggctctgcgatcctatcagactattcgtcaagggagag
cctcacaaacagagcaaactcgatgaaggccgctaccgcctcataatgagtgtgtcatta
ctagaccaattggtagcccgggtcttgttccagtctcagaacaagttagaaatcgcgctt
tggagagcagtaccttcaaaacccggatttggcctttccacggacaatcaaattgaaaat
tttgtagattgtctagccaagcaagtgggggagacaccagaagaggtcatagctaactgg
cctaaatatttaatccccacagattgctcaggtttcgattggtcggtttcagactggctt
ctcgaagatgacatggaggtgagaaatcgcttgaccattgactgcacccctcttttaaag
aggctgcgagcaggatggttaaaatgcatttccaactctgtcttgtgcctttctgatggc
accctgttagcccaaactgtcccaggggttcagaagagtggatcgtataacacgagttcc
tctaattctagaatccgggttatggcagcctatcattgtggcgcctcttgggctatggca
atgggcgatgatgccctggaaagcatagacacggacctatccgtgtataaaaatttaggt
tttaaagtcgaggtttcagcacaactggaattttgctctcacatatttaaggagagaaac
ctcgccattccggtgaatatcaacaaaatgttgtataaacttatccacgggtacaatccg
gaatgtggaaacgcggaagtcctcagcaactacttaagtgctgtggtctccgtcatgaat
gagctgagacatgatccagctctcgtttccaaactcttccagtggctggttcccagtgcc
gccacaaaagaattctag
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