Viruses: 30343896
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Entry
30343896 CDS
T40000
Symbol
OS5_082R, BST79_gp082
Name
(RefSeq) Only Syngen Nebraska virus 5; Chlorovirus glycoprotein repeat domain-containing protein
Virus
1917232
Only Syngen Nebraska virus 5
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Chlorovi_GP_rpt
Attacin_N
Motif
Other DBs
NCBI-GeneID:
30343896
NCBI-ProteinID:
YP_009325600
RS:
NC_032001
UniProt:
A0A1J0F9D6
LinkDB
All DBs
Position
NC_032001:78104..82468
Genome browser
AA seq
1454 aa
AA seq
DB search
MSYNNFKFNLQKYARFDTNTRDLVVPGNLYVDGSANIPGLQPADIAPVSTTDIVGNILSG
AYANVSGNVKATYIIGNGIYLSNLKVEIPGNITADIIGNISGNTITVSGNVTTGFLVGNA
SRLTGVVIGLPSTGNADVRGNVFAPGNVNAANVTSNGIIVYGNTIANATTITGNITAPFF
SGNGILLTSVTQTFPSTAAIDITGNVSAPGNVDTQSLVTGNITVGNANANAMIIQGNVRT
TYFSGNATGVMGVVPSVLATNLIGNVTATGNVSASYLLGNGSSVTLNGYTIAPRGNVANQ
AARLLLSNAVPGAIVFQTDANVTYMLLSSPATVPTNWLQFTGANFPVTSVMGRTGNVLLL
SNIDVKTIGGANIASPGSLTSATISILGNVSGSVLTSNIMTSNTAIVGNLTTNRITASGN
VTGSYLVGDGSLLEAVQLTTPPVANIDITGNVVAAGNVDASNVSATTLITGNAFIGGQVN
VIGNISAGWLIGNGSTITGIPASGTQPINIIGNVVSTGNVNAANVTTNVLLANTMFVSGQ
VHVTGNVIANFFTGNGSLLTNVPAVISGTQTINIIGNVRAVGNVNAANIVANVLGAGNVI
ITGQVNVTGNVFAHTFIGSGSLLTSITPTLGGTQSLNIVGNVRAAGNVDAANISTRLLRV
TGNPDVTGQISVVGNVVSPFFVGDGSRLFGVSAVVSGNQSVNIIGNVVAAGNVDAANIVT
TVFRANANVIMSGQADVTGNVIAAWLLGNGFLLNGIVANGSHNVNIIGNVFASGNVDASN
VTTGLLRVNGNLAATDQLDITGNIISGGFSGDGSLLGGISFASTASPLPSFVPPTTGFVS
DIVNTISYSNTAGWTIQLQQYTTTNVGITTYSMPINPDTPFVNLPGDVTQALNVPWSFSN
GVWSGNVRLFTLNTFASRPVSMGYNSSYGILGGNSSVTNCVGSRIPSINGSFRAIFSAPS
LESDAFVFTTQNIWVAYIANSATTAVYGQTFTPGILYLLEFTTNWEYLVSWHPVTSGPTV
QLPTSLGYIVIRWASETEAYLCLQPLTIGQGVTIYDKTAAGPTVASLGYYFIAKINPTDR
TCSWITPISVRSATSSQRPYMSFNPQRSILFFSANFVGNGVSDVLTVGNLTGTAQSMLLV
SGPTYHGAGMGLTTSAGIYIPNTLFELSSGVAAVTPYNPCASKDIWDASGQVAYMLIGSY
AAVQFNLRTWVSTSNTWTVQNAIIPQQTTYQGANPQPMVFRLPLGNTASPWISTTVTTSP
YSGADASGRNPWCVNLAAVPDGNVFFTASAIASNTSVATTFTIVTASATIPINALYTPIA
VFKFQDTNGSFGNFGAIVSTNTDNSLRLMGYNSSWTYSAGRVPGSNNSMRVIGTTNMTNA
TLAGTSCSNLTLTGQTFPFTFDITSALAVSNFRGQNRNVDSVTSIADYLSGGMTFGPGNA
YNLVVNRNAGCFKT
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaacaacttcaagttcaacttacaaaaatacgcacgatttgatacaaacaca
agagacctcgtagtgccagggaacctatatgtagatggctccgcaaacataccgggacta
caaccagcggatatagcaccggtgtcaacaacagatatcgtagggaacatattatcgggc
gcatacgcaaacgtatcaggaaatgttaaggcgacgtacattattggtaatgggatatac
ttatcaaatcttaaggtagaaattccagggaacataacagcggacatcataggaaatatt
tcaggaaatacgattactgtatctggcaacgtgactacggggtttctcgtgggcaacgct
tcgaggttaacgggcgttgtcataggattaccatcaacgggaaatgcagatgtcagagga
aacgtatttgctcctggaaacgtgaacgctgcaaatgtcacctccaatggtattatagtg
tacggaaacacaatagccaacgcgacaacaataacaggaaacattacagcaccctttttc
tcgggtaatgggatccttctgacatcagtcacgcagacgttcccatccacggcagcaatc
gacatcacaggtaatgtgtctgccccgggaaatgttgatacacaatcgctggtaacagga
aacataacagttggaaatgccaatgcaaacgcgatgatcattcagggaaatgtcagaaca
acatacttttcggggaatgcaacgggtgtcatgggtgttgtaccgagtgtattggcaaca
aacctcataggaaatgtcaccgccactggaaacgtgtcagcatcgtatctattaggaaac
ggctcgtcggtgactctcaatggatacaccatcgcaccaagaggcaatgttgcaaaccaa
gccgcgaggttattgctttcgaatgcagtgccaggagccatagtattccaaacggatgcc
aatgtgacgtatatgttgttatcatcccctgcaacagtaccaaccaattggctgcagttc
acgggggcaaacttcccggtgacgtccgttatgggccgtacgggtaatgttctgctgttg
tcaaacattgatgtgaaaacgataggaggagcaaacatcgcgtctcccggcagtctgacg
tccgcgaccatttcgatactaggaaacgtgtccggtagtgtcctcacgtcaaacatcatg
acttccaataccgccattgtaggaaacttgacaacgaacagaatcacggcatcgggaaat
gtgactggtagttatctcgtaggagatgggtcgttgctagaagcggtgcaacttacgact
cctcctgtggcaaacattgacatcacaggtaatgtcgtcgctgctgggaatgttgacgca
tcaaatgtgtcggcgacgaccctgataactggaaatgctttcatcggagggcaggtgaac
gtcatcggcaacatatctgccgggtggttgattggcaacggatcgacgatcacgggaatt
ccagcgtccggcacccaacctattaatataataggcaatgtcgtttctactggaaatgtt
aatgccgcaaacgtgacgaccaacgtgttgctcgcaaatacgatgtttgtaagcggtcaa
gtacatgttactggaaatgtgatagcaaacttcttcacaggcaatggatccttgcttaca
aatgttcccgcagttatttctggcactcaaacgataaatataattggaaacgtgagagca
gtgggaaatgtgaatgccgcaaacattgtggcaaacgtcctcggtgcaggtaacgttatt
atcactggacaagtaaatgtgacaggaaacgtctttgcacacacattcataggcagcggg
tcgttgttgacatcgataacaccaacgcttggaggcacacagtcgttgaacatcgtagga
aacgtaagagctgctggaaatgtggacgctgcaaacatcagcactcggttgttgagagta
actgggaaccctgacgtgacgggacagataagtgttgttggcaatgttgtgtctccgttc
tttgtgggagatggatcgaggttgtttggtgtaagcgccgttgtcagtggaaatcagagc
gtcaacatcatcggtaacgttgttgcagctggaaacgtcgatgctgcaaacatagtgacc
actgtttttcgggcaaatgcgaacgttatcatgagcggtcaagcggatgtcacgggtaat
gtcatagctgcgtggttattgggtaacggatttctgttgaacggtatcgtcgcaaacgga
tctcacaatgtgaatattatcggtaatgtttttgcgtctgggaatgttgatgcttccaat
gtgactactgggttgttgcgtgtgaatggtaacttggctgcaactgaccagcttgatatc
accggtaacatcatttctggcggtttctccggtgacggttccttgttgggtggtatttcc
tttgccagtacagcaagtccactgccatcattcgttcctcctacgacaggattcgtttct
gatattgtcaatactatatcgtattctaacaccgctggttggacaattcagttgcaacaa
tacacgaccacgaatgttggtatcacgacgtatagtatgcctatcaatcccgacactcct
ttcgtgaatctccctggtgatgttactcaagcattgaacgtaccatggagtttttccaac
ggtgtttggagcggcaacgtgagattattcactttgaatacctttgcttctcgccccgtg
agcatgggatacaacagtagctacggcatccttggtggcaattccagtgttacgaattgc
gtaggttcgaggataccgtctataaacggatcattcagagctatcttttctgcaccaagc
ttggaatctgacgcatttgtatttacgacacagaacatatgggtagcgtatatcgctaac
agtgcaacgacggccgtgtatggtcaaacattcactcctggcatattgtatcttttagaa
tttaccactaactgggaatacttagtttcatggcacccagttacatctggcccgaccgtg
caactcccgacatctcttggatatattgtcatacgatgggcgagcgaaacagaagcatac
ctgtgtctacaaccgctgacgataggtcagggtgttaccatatatgacaagactgccgcc
ggtcccacggtagcgtctttggggtattattttatagcgaagataaaccccacggacaga
acatgctcgtggataacacccatatctgtcagaagcgcgactagttctcaaagaccttat
atgagtttcaaccctcaaagaagtatcttgttctttagtgccaactttgttgggaatggt
gtcagtgatgtattaacggtcgggaatttgactgggactgctcagagcatgttattggta
tcgggtcccacatatcacggagcaggtatggggttgacaacatcagctggaatatacata
cctaatacattgttcgagcttagttctggagtagccgcagtcactccttataatccgtgt
gcaagtaaagatatttgggacgcgagtggccaagttgcgtatatgttaatcgggtcatac
gccgccgtccaatttaatctgaggacgtgggtatctacgagcaacacttggacagtacaa
aatgctataattccacagcagaccacctaccaaggagctaacccacagccgatggtattc
aggttgccgctcggaaataccgcatctccgtggatatcaaccacagttacgaccagtcca
tactcgggtgcggatgctagtggaagaaatccatggtgcgttaatctagcggcagtccca
gatggtaatgttttctttaccgcgagtgccatagcatcgaatacctcggtagcaactaca
ttcacgattgtaacagcatctgcaactatacctatcaacgcgttatacacaccaattgct
gtattcaaatttcaggatacaaatgggtcatttggtaactttggtgctatcgtttctact
aatactgacaattccctcaggttaatgggatataattcgtcttggacatattctgctggt
agggttccgggaagcaacaattcaatgcgtgtcatcggaaccacaaatatgacgaatgca
acactggcgggaacaagttgcagcaatttaactctcacgggacagacatttcctttcact
tttgatatcacaagtgctctcgcggtaagcaatttcagaggtcagaacagaaatgttgat
agtgtaacctctattgccgactatctctctggcggtatgacgtttggtcctgggaacgca
tacaatcttgttgtaaacagaaatgctgggtgctttaaaacttaa
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