Viruses: 30344033
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Entry
30344033 CDS
T40000
Symbol
OS5_219L, BST79_gp219
Name
(RefSeq) Only Syngen Nebraska virus 5; Major capsid protein VP54
Virus
1917232
Only Syngen Nebraska virus 5
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Capsid_N
Capsid_NCLDV
Motif
Other DBs
NCBI-GeneID:
30344033
NCBI-ProteinID:
YP_009325737
RS:
NC_032001
UniProt:
A0A1J0F9Q9
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Position
NC_032001:complement(209523..210836)
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AA seq
437 aa
AA seq
DB search
MAGGLSQLVAYGAQDVYLTGNPQITFFKTVYRRYTNFAIESIQQTINGSVGFGNKVSTQI
SRNGDLITDIVVEFVLTKTGNGGTTYYPAEELLQDVELEIGGQRIDKHYNDWFRTYDALF
RMNDDRYNYRRMVDWVNNEVVGSQKRFYVPLIFFFNQTPGLALPLIALQYHEVKLYFTLA
SQVQGVNYNGSTPVANAAQPTMSVWVDYIFLDTQERTRFAQLPHEYLIEQLQFTGSETAT
PSATTQASQNIRLNFNHPTKYLAWNFNNPSVYGQYTALANIPGAGANGGTPTGSVTVPDW
GNTGTYYEQLAVLDSAKIQLNGQDRFATRKGSYFNKVQPYQTIGGATPAGVYLYSFALKP
AGRQPSGTCNFSRIDNATLSLTYKTCSIDATQGAAVLGNTETTTANTATLLTALNIYAKN
YNVLRIMSGMGGLAYAN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccggaggactttcacagctcgtagcttatggcgctcaggacgtgtacctgaccggc
aacccccaaattaccttcttcaagactgtataccgccgttacaccaacttcgccattgaa
tctatccaacagacgatcaatggctccgtaggatttggcaataaggtgagcacacaaatc
tcccgcaacggtgacctgatcaccgacatcgtggttgagtttgtgctgaccaagaccggc
aacggtggtaccacttactaccccgctgaagagctgctacaggatgttgagctcgaaatc
ggtggccagcgcattgacaagcactacaacgactggttccgcacctacgacgctctgttc
cgcatgaacgacgaccgttacaactaccgtcgtatggtcgactgggtgaacaacgaagtt
gtgggctcccagaagcgtttctacgtgcccctgatcttcttcttcaaccagacccccggc
cttgctctccccctaattgccctgcaataccacgaagtgaagctttacttcaccctggcc
agccaggtgcaaggtgttaactacaacggcagcacccccgtcgccaacgccgctcaaccc
actatgtccgtgtgggtggactacatcttcctggacacccaggaacgtactcgtttcgcc
cagctaccccacgagtacctgatcgaacagctacagttcactggttccgagactgccact
ccctctgccactacccaggccagccagaacatccgcctcaacttcaaccaccccaccaag
tacctggcgtggaacttcaacaacccctctgtgtacggccagtacactgccctggctaac
atccccggcgctggtgccaacggtggtacccccaccggaagcgtgaccgtgcccgactgg
ggtaacaccggcacctactacgaacagcttgccgtgctggactccgccaagatccagctg
aacggtcaagatcgtttcgccactcgcaagggctcttacttcaacaaggtgcagccttac
cagaccattggtggtgccacccccgctggtgtctacctgtactccttcgccctgaagccc
gctggtcgccaaccctccggtacctgcaacttctcccgcattgataacgctactctgtct
ctgacttacaagacttgcagtatcgatgccacccaaggcgctgccgtgctcggtaacacc
gaaaccaccaccgccaacaccgccaccctcctaactgccctcaacatttatgcaaaaaat
tacaacgtcctcaggattatgtccggtatgggcggtcttgcatatgccaactag
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