Viruses: 30523508
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Entry
30523508 CDS
T40000
Symbol
BQ3484_53
Name
(RefSeq) Cedratvirus A11; DNA-directed RNA polymerase RPB1 (domain 5)
Virus
1903266
Cedratvirus A11
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
30523508
NCBI-ProteinID:
YP_009328993
RS:
NC_032108
UniProt:
A0A1M7XTV4
LinkDB
All DBs
Position
NC_032108:55089..57182
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AA seq
697 aa
AA seq
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MATPRKLTFEEIEDIVSVIGSDAEVSVRSPVQDITDTVNEAIRKKLRDDLSKINITPLGI
PDLKEATRHYFIRSKAVPGTPVGYQVSESIGGPTTQMSLNAFHTAGSGSDSSQGIERIQQ
LIDLTKKPKVIVTQTHFREHLDYERAYSKIRREILDVSVGSLVEDYDIENIEFITQDRPW
WYDLYEEIYSEIPEIDYILRLNLNVKNMVAFGVTMEEVAEAIERGNATTIKAVFSPLNIG
IVDVYPIRETLIDRLQGEGQGSLYMENAANIFLNSIVVDKLDDLHIKGIPGAKKAFPQST
PVLNILEEEFPYPEEKNVWVLRLSRRRMFTSGVTKDKLVNLISLIPSLQVVEVEDEQPDY
IIVYSEEGKPWDVIKKTLADKNTASRIINASQYYFIEIQGGKYVDILSLDDVRPELTVSN
NIHDIYEVLGVEAARKFYIREFYNLFVLQDLYVFAGHLELMADFVTNMGILSAINTTGIG
RQEIGSLAKATYRKPMDILYRAGSAGEVNDISSVSASVLLGQRPRIGTGYVNLLPDKKRE
EELLATLRRPEAQIASTDFSNSIDQLSDLVTGDKVFTVSDADLDLMFAGPNAPPLTTSYL
GTAITRIGPTPEVEPLEQIRPLKVVSEQLLEVAPALEQQIEKEERREAEEIVPVSVPPRF
RLPSLGGGFSFTRTVQPIREREVTLRSTEELLSELER
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctactcctcgcaagttaacctttgaagagattgaggacattgtttccgtgattggt
tctgatgcggaagtttctgtcaggtctcctgtgcaggatattacggacacggttaacgag
gcaatcaggaagaaactacgcgatgatctgtccaagattaacattactcctctaggcata
cctgacctcaaggaggctaccagacactactttatcaggagtaaggcagtaccagggact
cctgtaggttaccaagtgtcagagtctattggaggacctaccacgcagatgtcacttaac
gcgttccatactgcaggttctggttcagacagttcacaaggcattgagaggattcagcaa
ctcatcgaccttaccaagaaacctaaagttatcgtgactcaaacccactttcgtgagcac
ctagactatgagagggcctatagtaagattagaagagagattctagacgtatctgtgggc
agtttggtggaagattacgacattgagaatatcgagtttatcacgcaagataggccttgg
tggtatgatttgtatgaagagatctactcagagatacccgagatagattacatcttgcgt
ctaaacctgaatgttaagaacatggtagcctttggagttaccatggaggaagtggcagag
gctatagagagaggtaacgctaccaccatcaaggccgtctttagtcctcttaacattggt
atcgtagatgtctaccctatcagagagactcttatcgaccgtttgcaaggagaaggacaa
ggctccctttacatggagaatgcagccaacatctttcttaatagtattgtggtagacaaa
ctggacgatttgcacatcaagggcatacctggtgcaaagaaggcttttcctcaaagcacc
cctgtgttgaacattctggaagaagagtttccctatcctgaagagaagaatgtgtgggtt
ctacgtctgagtagaagaaggatgtttaccagtggagttaccaaagataagttggttaac
ctcatctctctcatccccagtttgcaggtggttgaggtggaagatgaacagcctgactat
atcatcgtctactcggaggaaggtaaaccttgggacgttatcaagaagaccttggctgat
aagaacactgcttccagaatcatcaatgcctcgcaatactatttcatagagattcaggga
ggcaagtatgtagatatcctctctcttgatgatgtcaggcctgaacttacggttagtaac
aacatacatgacatttatgaagttttgggagtggaggcggccagaaaattctacattcgc
gagttttacaacctctttgtactgcaagatttgtacgtgtttgccggtcatctagaactc
atggccgactttgtaaccaacatgggcatcctctctgccatcaacactacaggcattggt
agacaggagattggttctctagccaaggccacttatcgcaaacctatggacattctctac
agagcaggttctgcaggagaagttaacgatattagttccgtctcagccagtgttctcttg
ggtcaaagacctagaattggtacgggctatgtaaaccttttacctgataagaagagagaa
gaagagctactagccaccctgagaagaccagaggcacagattgccagtaccgactttagc
aatagtatagatcagctctctgacctagttactggagataaggtctttaccgtgtctgac
gctgacctagaccttatgtttgccggtcctaacgctcctcctctaaccacttcttatcta
ggaactgccattactcgcatcggacccactccagaggttgaacccttggagcaaatcagg
cctctcaaggttgtatcagagcaactgcttgaggttgctcctgctctagaacaacagata
gagaaggaagagagaagagaggcagaggaaatagtgcctgtctctgttcctccccgcttc
agactgccttctctaggtggaggtttcagctttactcgtactgttcaacccatcagagaa
agagaagttacactcagaagcacagaagaactgctatccgagctagaaaggtaa
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