Viruses: 30902367
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Entry
30902367 CDS
T40000
Symbol
UL19, BQ1924_gp47
Name
(RefSeq) Spheniscid alphaherpesvirus 1; major capsid protein
KO
K26014
Herpesviridae major capsid protein
Virus
2560777
Spheniscid alphaherpesvirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_MCP
Motif
Other DBs
NCBI-GeneID:
30902367
NCBI-ProteinID:
YP_009342387
RS:
NC_033464
UniProt:
A0A1R3T8P3
LinkDB
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Position
NC_033464:85668..89834
Genome browser
AA seq
1388 aa
AA seq
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MDHRPLAGCLLPQGDQQPFNVAAAIAPTNQILTTIEVSSHRALFDFFKRINSDDNGLYAA
QFDMLLGTYCNTLTFVKFLELGLSVACVCTRFPELGYVNEGTIQFEVQQPMIARDGPHAA
DQPVHNYMTKRINRRSLQSAFVIAAEALGLLTAETFDGTRISENLRVRAIQQLARNIQTV
LDSFERGTADQMLRILLEKAPPMSLIVPLSRCRDEGRLSSQVARATLVSELKRRVCEDSF
FMSKSFHHKDVVLAKLTELVGCTRPSVAVPRLTHSDTHGRQVDGVLVTTSSVRQRLLNGF
LTLADTHADVPVAYGEMMITGSNLVTALVMGKAVRNLDDVARHLLNMRQETLVAENREIL
NEYEDEPKTARVRADLVTIGDRLVFLESLERRVYQATQVPYPLLGNIDLTFIMPLGLFKR
PVDRYSRHAGDYVPVPGTHDQRTFPPKQIFFLNKDGQLVSLTLESAIGTVCHPSILDVDS
AVEYLRRDPPELTAVFGSYVAAPVIGPLEIQIREFYESWGNYMLAGQVPLWVSEQMMTTE
QMLSCGNPRLAMELHPLFDFFSAPGDLAVPGPINIPPVMPTVNVTWRVANCNIPLPLCTT
DFRNERGHELSFGRHKLSQATVDAVRGTFNDRNYPAAFYIIEAVIHGSERLFCAMARLVM
QCIHSYWVSCRRVAFVNSYPMVMYINTYLGNGELPDDCTAVYRDLVDHLYALRHMVSEFT
LPAPALGGQSQEELNHLLVDSTFLPPLMWDCDALIYREVHRHTRDLSINAGGDNYEPMQW
RRLQDVDFQRRGGHLLHNRPVRPLPDTAYFVPHHDQDWTVMSKIYYFVIVAAFSRGKCCT
MGIRYEQVYAITQSVVVPEIGKDEEPPVAPDDPRHPLNARHLVPNSMNVLLHNARVVTDS
DALLTLQEVVSDAAERTTCILAGAAPDVGAMTAGTRGIRTYDGSLHHGLLMMAYPRNDGT
IIDGTFFYPAPVNALFACHEHLAAMRDIAPRISSLARDIPPVPVFLGANYYSSVKQPVSR
YVSESQLNENSMTYALMAGFFKMSPVAFLHQLRTGLHPGIAMTVVRQDRFLSENALFAEK
ASESYFMGQLQIGRHNSAGGINFTLTQPRANVDLGVGFTAAHTSMMLRTPVTDMGNLPQN
LFLTRGAAPMLDVDTEEFLRVTVSAGNRLAPRGPVPFLGPALPPTPPGLEHGQESVCEFI
VTPVSADLDYFRGPCNPRGRAGGAIYSGEGDNDIITMMYDHSFPDAAFPSRATNNPWASQ
RNSYGDRLYNGAYNLSGASPIYSPCFKFFTTTEVAAKCRCLVRLITEAGSAIAMFPSDTE
YQFKRPAGSTEMTEDPCGLFQEAYPPLCSTDQALMRTQRAGEIGADETHYAQYLIRDASP
VRGCLPLL
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggaccatcgtccactagccggctgcctactacctcaaggcgatcaacagcctttcaac
gtagcagccgctatcgctccaactaaccaaatcttgactacgatcgaggtttcatcgcat
cgtgcattgttcgatttttttaaacgaatcaattcggatgacaatggcctatatgcagct
caattcgatatgctgttaggcacatactgcaataccctaacgttcgtcaaattcctggag
cttgggttatcagtcgcctgcgtgtgcaccagatttccagaactagggtacgtcaacgag
ggaaccattcaatttgaggtgcaacaacccatgattgctcgagatggaccgcatgctgca
gaccaacctgttcataactacatgacaaagcgcatcaaccgcaggtctttgcagtctgct
ttcgtaatcgcggcagaagcccttggtcttttgacagccgaaacgtttgacggtacaaga
atctcagaaaacctgcgcgtgcgcgctattcaacaattggcgcgcaacatacaaactgta
ttggactctttcgaacgtggtaccgccgaccagatgctcagaatattgctggaaaaggcc
cctcccatgtccctcatagtacctcttagcagatgtcgagatgagggacgcctgtccagc
caggtagcacgcgctaccctcgtttctgaacttaagcggcgcgtatgcgaagacagcttc
ttcatgagtaaatcgtttcatcacaaggatgtagttttagccaaactaacagaactagta
ggctgtactagaccgtctgtggcagtgccaagactaactcattcagacacgcatggtcgc
caggtcgatggcgttttggtcactacatcatctgtccgccagaggctgcttaatggtttc
ctgacattggctgacacccatgcagacgtacctgtagcgtatggggaaatgatgataacc
ggttccaacttggtaacggctcttgtgatggggaaagcagttagaaatttggatgacgtt
gcacgtcatcttctgaatatgcgccaggagacattagttgccgaaaacagggaaatactg
aacgaatacgaagatgagccgaaaacggccagggttcgtgccgacctagtgacgatcggc
gacagactagtttttctggaatcccttgaacgtcgcgtgtatcaagcgactcaagttccg
tatccgctgcttggcaacatcgacctgacatttatcatgcccctgggactattcaagcgt
ccagtagacaggtacagccgccatgctggggattacgttcctgttcctggaacacatgac
cagcgcacgttcccacccaagcagattttcttcctgaacaaagatgggcagctagtaagc
ttaacgctcgagagcgctatcggcacagtatgtcacccatctattctagatgtcgattca
gctgtcgagtacctgcgcagggatccaccagagctcactgctgtatttggctcgtatgta
gcagctccagttattggcccgctagaaatccagattcgcgaattttacgaatcgtggggc
aactacatgcttgctggacaagtaccgttatgggtttctgagcagatgatgaccacggag
cagatgctttcatgcggcaacccaaggctggcaatggaactgcaccccctatttgacttt
ttctcggcacctggcgatttggccgtccctggtcctatcaacatccctcctgtgatgcca
acagtaaatgttacttggcgtgttgccaactgtaacatccctctgccattatgcacaacc
gatttcagaaacgaaagaggccacgaactgtcgttcgggagacacaaactcagccaggcg
accgtcgacgccgtccgtgggacgttcaacgacaggaattacccagccgccttctatatc
atagaggctgtaatacatggcagcgagcgtttgttttgcgcgatggctcgtctggttatg
cagtgcatacacagctactgggtgagctgcaggagagtcgcttttgttaacagctacccg
atggtgatgtacatcaacacgtacctgggtaacggtgaactccccgacgactgcacagca
gtatacagggacctagtagatcacctgtatgcactcagacatatggtatcggaatttacg
ctgccggccccagcgctagggggtcaaagtcaagaagaattaaatcacctgttggtagat
tctacgtttctgcctcccctaatgtgggactgcgatgccctgatttaccgggaggttcat
cgccacacgcgcgatctctcaatcaacgctgggggagacaattacgaaccaatgcagtgg
cgccggctacaggatgtcgattttcaacgccgtggtggccatttgctgcacaatcgtcca
gttcgacctcttccagacaccgcttattttgtccctcatcacgaccaagactggacggta
atgtcaaagatttactactttgtcatcgtcgcggcattctcgaggggtaaatgctgcaca
atgggaatacggtatgagcaggtgtacgcgattacacaatctgtcgtagttcctgaaata
ggtaaagatgaagaaccgccagtagcaccagatgacccacgtcatccactaaacgcgcgt
catctagttccaaattcaatgaacgttctgctgcataatgccagagtagttacagattcg
gacgcactgctcacattacaggaagttgtttccgacgcagcagaacgaaccacttgcatt
ctagctggggccgcacctgatgtcggcgcgatgactgcaggaactagaggaatacgtaca
tatgacggttctctgcatcacgggctgctcatgatggcgtacccaaggaacgatggtacg
atcatcgacggcacgttcttttacccagcaccagttaacgcactgtttgcctgtcacgaa
caccttgctgctatgcgtgacatcgccccaagaatatcatcattagctagggacatacct
ccggtcccggtgttcttgggagccaattactacagctcagtcaagcagcctgtgtctaga
tacgtatcagaatcacagctgaatgaaaactccatgacgtacgcattaatggcaggtttt
ttcaagatgagtcctgttgcctttctacaccagctgcgcacggggttacaccctggtata
gctatgacagtcgtgcgccaggacagatttctttccgaaaatgcgttatttgcagaaaag
gcttcagagtcctacttcatgggccagttacagatagggcgtcacaactctgcaggagga
attaattttacccttacccagcccagggccaacgttgaccttggggtaggtttcactgct
gcacatacatctatgatgctacgtactcctgtaaccgacatgggaaacctgccacagaat
ctgttccttacaaggggtgcagcacctatgctagatgtagacacggaggaatttctccgc
gttaccgtttctgctggaaatagactcgctccacgcgggccagttccgtttctgggacca
gcattaccgccaactcctccagggctcgaacatggacaagagtcggtatgcgagtttatt
gtaactcctgtatcggcagaccttgactactttagagggccgtgcaatcctaggggcaga
gcagggggtgcaatatacagcggtgaaggagacaatgacatcataacaatgatgtacgac
cactcatttcctgatgcggcgttccctagcagagcaacgaacaacccttgggcatcgcaa
cgcaactcgtacggcgatcgcctttacaacggcgcatataacctcagcggggcatcgcca
atttacagtccgtgtttcaaattcttcactactacagaggtggcagcaaagtgcagatgc
ctggtgcgactgataactgaggccgggtcagcaatagccatgtttccaagcgataccgaa
taccagttcaaacgtcctgccggttctacggaaatgacagaggatccatgcgggcttttc
caggaagcatatcctccgttatgttctacggaccaagcactcatgcgaacacaacgcgca
ggcgagataggtgcagatgaaacgcactacgcgcagtatctcattagggacgcgtcccct
gtaagagggtgtcttccgctgttgtaa
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