Viruses: 30902412
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Entry
30902412 CDS
T40000
Symbol
UL6, BQ1924_gp59
Name
(RefSeq) Spheniscid alphaherpesvirus 1; capsid portal protein
KO
K26020
Herpesviridae portal protein
Virus
2560777
Spheniscid alphaherpesvirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL6
Haemadin
Motif
Other DBs
NCBI-GeneID:
30902412
NCBI-ProteinID:
YP_009342400
RS:
NC_033464
UniProt:
A0A1R3T8C3
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Position
NC_033464:complement(107917..110259)
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AA seq
780 aa
AA seq
DB search
MSYDRKQRGNVCGIGLCRPATSKSLYNHARGGNVATSLDDWILIHPSPRTALFKQILLGE
LGYTEGQGVYNSVRSTEAAVRQIQASILTNTLDAARYEDLARDWEKYASSRRVRAEDIAD
RYGPHSEAEAVRVAEQVFETWRQTLRTALLDFIRGVAACFASSEPDGAASFSKYIDWITC
LGLVPVIRTRPGGRMYDRAGCRIASTSSFCTRDGRDCLGDSVLRQKLIVAENILNRGINV
VEELAECVNSVAIMDYDRAHLFYSFRRREVKVRDSISGHSGECLVIWHPLYNDGNVLFDS
PMQRMYREVMSCRALREHARICQLINTIPIKVLVGKRNGDDSGVAGVAKAVDKALGTNDD
NGAGSAASRLVKLIINMKGMRHVGDITETVRSYLDETGGHLLDETSVDTTQPGFGRSTAR
GAGGQSSGQSEARRVQDAFRTSVVNNINGMLEGYVNNLFKTIEGLKDANGELLKKLRDKE
VDLERAKSAAITAAQSRIDAGTIDPSGRSCNTGQCSVDDPSEVITGLVKDLDYEIIDVSG
AMGDDTYVANSFQSRFIPQYGEDLDRLSRLWEQELMRCFKMNRVTNNQGQELSLSYSNSA
IALLVAPYFFSVLRARHIGFLVATHETYRSEEELCMSIFKKTRLEAYLTDIATLFIADVR
REVALLRCNSETGIGYSRGYGNYTCPGYGVGKEEWSDSSSDDESERSAMQSPKRERDSRR
ASGKGRSWGRVGVGYRRRVKLASGTSHYVRGERGPRETAEVRDRISKRHAVKRRRADVST
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgacagaaagcagcgtggaaatgtttgtggtatcggattgtgtagacctgca
acgtcaaaaagtctttataaccacgctagaggaggaaacgtagcgacatcattggatgat
tggattcttattcatccgtccccgagaaccgccctattcaagcagattttgttgggagaa
ttgggatatacagagggtcaaggggtatacaattctgtccgttccacagaagcggcggta
cgacagattcaggcatctatacttacaaacacgttggatgccgctaggtatgaggatctt
gcacgtgactgggaaaaatacgcatcttcacgacgtgtccgggcagaggatatcgcggat
cgttacggaccgcatagtgaggccgaggcagtgcgcgtcgccgaacaagtgtttgaaaca
tggcgtcaaacgctgcgtactgcattactagattttataagaggtgtcgcggcatgcttc
gcgtcaagtgagcctgatggcgccgcaagcttctccaaatacatagattggataacgtgt
cttggacttgtaccagttatacggactagaccaggggggcgtatgtacgacagagctggt
tgtagaatagcctctacatcatccttttgcacacgtgatggtagagactgtctgggcgat
agtgttctgcgccaaaaactaattgtggcagaaaatatactgaataggggaattaacgtt
gtggaggagctggcggaatgcgtaaactctgtagctataatggattatgatagagcgcac
cttttttatagtttcaggcgcagagaagttaaagtaagggattctatttccggccattca
ggtgaatgcttggtcatttggcacccgttgtacaatgacggaaacgtactgttcgattca
ccaatgcagagaatgtatagagaagttatgtcatgtagagcattgagggaacatgccagg
atatgccagcttataaacactatacctatcaaggttttggtaggtaagcgcaatggagat
gactctggcgtggcaggggtagccaaagccgtcgataaagctctcggaacaaacgacgat
aatggcgcaggctcggccgcgtctagattagtgaaacttatcataaacatgaagggaatg
cgacatgttggcgatattacggagaccgttagatcgtatttagatgagacgggtggtcat
ttactcgatgaaacgtcagtcgatactactcagcctgggtttggaaggtctaccgctaga
ggtgctggtggtcagtcctccggacaaagtgaagcgaggagagttcaagatgcgttcaga
acttcagtagttaataacataaatgggatgttggagggatatgtaaacaacttattcaaa
acaatagagggactaaaagacgctaacggtgaactattgaaaaaactacgggacaaagag
gtggatttagaaagggctaaatcggcagctattaccgctgcccagtctagaattgatgca
ggcacgattgatccgtctggtaggagttgcaatacagggcagtgttctgtggatgaccca
tcagaagttatcaccggattagtgaaagacctggattatgaaataatagatgttagcggt
gctatgggagatgatacctacgtcgccaatagttttcaaagcagattcatacctcagtat
ggagaagacttggacaggctgtcccgcttatgggaacaggaactcatgcggtgttttaaa
atgaatagagtaacgaataaccaaggacaggaactatcgctgtcatattccaatagcgcg
attgcgttgctcgtagccccttattttttttctgtacttagggctaggcatataggattc
ctcgtcgccacccacgaaacgtatagatctgaggaggagctatgcatgtcgattttcaaa
aagacgagactggaggcatacctcacagatatagctactctgtttattgcagacgtacgt
agggaagtcgcactgttgcgctgtaactcagaaactggtataggttactcacgtggatat
ggaaactacacatgtcctgggtatggagtcgggaaagaggaatggtctgatagctcaagc
gatgatgaatcagaacgatccgctatgcagtcacctaaacgagagcgcgactctagacga
gctagtggaaagggccgcagctggggacgggtcggtgtcggctatcgtagaagagttaag
ttggcaagcggtacctcgcattatgtgcgaggtgagagaggtccaagggagacagccgag
gttcgtgaccggatcagtaagaggcatgcggttaagcgacgacgggcggacgttagtact
taa
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