Viruses: 3160806 Help Entry 3160806           CDS       T40000                                  Symbol L, PICVsLgp1 Name (RefSeq) Pichinde virus; L polymerase   KO K25303   Mammarenavirus RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-] Virus 2905917  Pichinde virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Arena_RNA_pol ArenaCapSnatch DUF816 Motif Other DBs NCBI-GeneID:  3160806 NCBI-ProteinID:  YP_138534 RS:  NC_006439 UniProt:  Q915A5 Structure PDBPDBj LinkDB All DBs Position NC_006439:31..6603 Genome browser AA seq 2190 aa AA seqDB search MEEYVSEFKDMVRKWVPEWEELSEQKNNVLAQVKDRAITIEGLKLLSMLVEVDSCKKHSC RHNTRMTVNAILRELKVTCPTLPDVTPDGYCMVGDVLILLEVFVRTSQEAFEKKYNQDFL KLMQLSSDLKRQNITLVPVIDGRSSYYVEYIPDWVVERLRWLLLKLMDGLRTSGEEVEEL EYERLISSLSSLENQSLGLESLLAVKERGLPYKVRLEKALVSCINNKLTTDQCRTKIMEV FQQFKMLQLSGQHDRKLQATDREDMISKLQNHEFIQCSIKDMPKSEIRLCEFCSVHILGI IDQLRQSEIRHPSIESKEYFRVLSICNKIKSQKVFNTRRNTLLVLDLIMYNILCDLDKSS PGTVFREVLLMQGLPSVNDRLINVDFLIEQITKKFIKNPSWLEKAKKRLSLVCSEFPLDD ILPLLREPDIEYYFDLKTSILDEWGAKPYLQYKTKSRCMCGGRPGRGQPDYAIMGESEFE ELLKALSSLSLSLINSMKTAAVPKMKVNNADEFYGKVYCDEVFFQRFGEGGSLTLLYQKT GERSRCYAVAFRSKSGGLYETKASFYCDPKRFFLPIFSADVIQRTCEEMLSWLDFMSQPL LDLVSDLLRRLILCILCTPSKRIQIYLQGFRYYIMAFVNEVHFKELFEKLKVVMLTPSEW QTAILIDDLILLVLNNSREEDMAKIFKFVLNVSYLCHFITKETPDRLTDQIKCFEKFLEP KLKFDSVLVNPSNSMELPIEEEEKMVHDMERLLSKKLESKCEGRPGINKDVLSVCLSLFN NGSLEVKPSSSCDPMTPSFTSTALDMSSNKSVVVPKLDEVGEVITEYDYSSIVSAVVVEI VEHFKTKGKYKLDPKEINFKILKRLSSLIQIKKESVEPDETEELLSEDQSDCLKEIETRV SKVLSKVDTNVKPDLKTPCPLERLCPKSTMVIIKRETSLHDVKDFDYNLFSAEVYEDLVN LIYEDVTARSMYFADRLMNPCPLEYLIKNLTLKAYKEADYFECFKYILIASDFDNRVGRY DHKSRSRLGFTDAALQIRETSRISSRESNSESIAKRLDQSFFTNSSLRNLCFYSDESPTE RSSVSTNVGRLKFGLSYKEQVGGNRELYVGDLNTKLTTRLIEDYSESLMQNMRYTCLNNE KEFERALLDMKSVVRQSGLAVSMDHSKWGPHMSPVIFAALLKGLEFNLKDGSEVPNAAIV NILLWHIHKMVEVPFNVVEAYMKGFLKRGLGMMDKGGCTIAEEFMFGYFEKGKVPSHISS VLDMGQGILHNTSDLYGLITEQFINYALELCYGVRFISYTSSDDEIMLSLNEAFKFKDRD ELNVDLVLDCMEFHYFLSDKLNKFVSPKTVVGTFASEFKSRFFIWSQEVPLLTKFVAAAL HNIKAKAPNQQADTIDTILDQCVANGVSIEVVGAIAKRTFSMIIYSGFPNDPFLCLEEMD VLDWVNGSRGYRLQRSIESLFPDDLLLSIIRKACRKIFYKIQSGALEESYIVTTLQQSPD DCLKQLLETCDVETEAIEDALDIRWLNLRVHGDLRLVLRTKLMSTTRTVQREEIPSLVKS VQSKLSKNYVRGAKKILADAINKSAFQSSVASGFIGVCKSMGSRCVRAKRGIQIHQDHTG KITLHRDCHHCNQRKGVYCKAALSEVSEYSRPLIWDYFALVLTNACELGNWVFQKAEVPK IVTHLNNPNHFWPIKPSTHSELEDKVGINHILYSIRRNFPTLFDEHISPFLSDLNMLRLS WVQKIKFLDLCVAIDITSECLGIVSHIIKHRREELYIVKQNELAMSHSRESHPLERDSTL SQRVCANFLIQILFESMLVPVIMSTSQFKKYFWFGEVELLPNNAQHDLKQLTQFVCDCKK NNTSRTMNLDDLDVGFVSSNLILSCANLNISVFINELDWMNRDDYENMEQHILASPSEII PIELNLTFSHKRVSHKFRYERSTNYILKLRFLIERGSLLDSLDCDGYLLLKPHSVEYYVL NPLKSHKLDGVSLLVLNPLINGKDVLDFNDLLEDQDVRFKSRSAVFQKVKLDMKDYFKDL KNKFSYKLIGPDVGMQPLILENGLIKKEQSVSRLEVNLDSKVVIIRLEALEPEKRSKFIA NLFQYLSSAQSHNKGIIMTEQDLRYMIENFPEVFEHMLHDAKDWLNCGHFSIVKSKTLGT VMIADEKGPFKIKGIRCRKLFEDNESVEIE NT seq 6573 nt NT seq  +upstreamnt  +downstreamnt atggaggaatacgtttccgaatttaaagacatggtaagaaaatgggttccagaatgggaa gagttatctgagcagaagaataacgtgcttgcacaggttaaagacagagccatcacaata gaaggcctgaaactcttatccatgttggtagaggtggactcatgtaagaaacattcctgc agacacaacacaagaatgactgtcaatgctatccttagagagttgaaagtcacatgtcct acactaccggatgtcacaccagatggctactgcatggttggagatgtcctcatccttttg gaagtgtttgtgaggaccagtcaagaagcatttgaaaaaaagtacaatcaggacttcttg aaattgatgcagcttagttctgatctcaagaggcagaatataactttagtacctgttatt gatggtagatccagctattatgtggaatatattcctgattgggttgtagagaggcttcgg tggttgctcttgaagcttatggatggactgaggacatctggtgaagaagttgaggaattg gagtacgaacgccttataagttccctgtcatctttggaaaatcagagtcttggtttagaa tcactacttgccgtgaaagaaagaggacttccttacaaggtgaggttagaaaaggcattg gtgtcttgcattaataacaaattgacaacagatcaatgcagaacaaagatcatggaagtt tttcagcaatttaaaatgttgcaactctctggccaacatgataggaaactgcaagctaca gatagagaagatatgatctccaaactccagaaccatgaattcatccaatgttctatcaaa gatatgcctaaatcagaaatcagattatgtgaattttgttcagtacatattttaggcata atagaccaacttaggcaatctgaaatcaggcacccatcaatcgaaagcaaagagtacttc agagtgctttcaatatgtaacaaaattaagtcccagaaggtttttaacacaagaaggaac actttattggttttggacctcatcatgtacaacatcttgtgtgacttagacaaatcttct ccaggcactgtgttcagagaggtgctcttaatgcaagggctgccgtctgtaaatgacagg ttaattaatgttgatttcttaatagagcaaatcaccaaaaaatttatcaaaaatcccagt tggttggagaaagccaagaaaagactaagtctggtgtgtagtgaatttcctcttgatgac atcttgcctcttctaagggaaccagacattgaatactactttgatctaaaaacatcaata ttagatgagtggggagccaagccttatcttcaatacaagactaagtcacggtgtatgtgt ggaggtagaccagggagggggcaacctgattatgcaattatgggtgaaagtgagtttgag gagttgttgaaagcattgtcaagtctaagtttgtcactcattaacagcatgaagacagca gcagttcctaagatgaaagtgaacaatgctgatgagttttatggaaaggtctactgtgat gaagttttctttcaacgatttggagaagggggctctctcacactattgtaccaaaagaca ggagagagatccaggtgttatgctgttgctttcagatccaaaagtggaggtttatatgag acaaaagcatcattttactgtgatcctaagaggtttttcttgccgatctttagtgcagat gtgattcaaagaacttgtgaagaaatgttgtcttggttagactttatgtcccaacccttg ttggatttggtatctgatttgctcagacgtctcatcctttgcatactatgcactccttcc aagcgtattcaaatttacttacaaggctttagatattatattatggcttttgtgaatgaa gttcattttaaggaattgtttgagaaactgaaagttgttatgctaacaccttcagaatgg cagacagcaatacttattgacgatctcatactcctagtactcaacaattcaagagaggaa gatatggctaaaatctttaaatttgttctaaatgtatcctacttgtgtcatttcataacc aaggagacccctgatagattgactgatcaaatcaaatgttttgagaagttcttagaacca aagttaaagtttgactcagtcctggtcaacccctccaacagtatggagctccctattgag gaggaagagaaaatggtgcatgacatggagagactactaagtaaaaagctggaatctaaa tgcgaagggagaccagggatcaacaaggatgtgcttagtgtttgtctatcattgttcaac aatggctcactcgaagtgaaaccctcatcttcttgcgaccctatgaccccctccttcaca agcacagctctggacatgtccagcaataaaagtgtggtggttcccaaacttgatgaagtt ggtgaagttatcactgagtatgactactcttctattgtctctgctgttgttgtggaaata gttgaacatttcaaaaccaaaggtaagtacaagctggacccaaaagagataaacttcaaa attctaaagaggttatcatcattgattcaaataaagaaggagtcagtagagcctgatgag actgaggagctgttatcagaagatcagagtgattgtcttaaagagattgagactagagtt tcgaaagtgttatctaaggttgacaccaatgtcaaacccgacttgaagactccgtgtccg ttggagaggttgtgccctaaatccacaatggtaatcatcaaaagggaaacttcgcttcat gatgtgaaagactttgactacaacttattttcagctgaagtgtatgaagatcttgtgaat ttgatttatgaggatgtcactgctagatcaatgtactttgcagacagactaatgaatccg tgtcctttggagtacttgataaagaacctcacactgaaggcttataaagaggctgattat tttgagtgcttcaagtacatccttattgcaagcgattttgataatcgagttggaagatat gatcacaaaagtagaagcagacttggattcacagatgcagcactacaaataagggagaca tcacgcattagttcaagagagagcaactctgaatcgatagctaaaagattagatcagagt ttctttacaaactcatctttacgaaacctttgtttctattcagatgaatccccaacagag aggtctagtgtgtctactaatgtggggagattgaaattcggactttcttacaaggagcaa gtaggtggtaacagagagctttatgtcggtgacttgaacaccaagctcacaactagactt attgaggattactctgaatccctcatgcagaacatgaggtacacctgcctgaacaatgaa aaggagtttgagagagcattattagatatgaaatcagttgtcagacaaagcggccttgca gtgtcaatggaccactcaaaatgggggccacacatgtcaccagtcatctttgccgcatta ttgaagggccttgagttcaatctcaaagatggatcagaagttcctaatgctgcgattgtc aacatattactatggcatatccacaagatggtagaagtgcctttcaatgttgtagaagca tacatgaagggcttcttgaaaagagggttgggtatgatggacaaaggagggtgcacaatt gcagaagaatttatgtttggatattttgaaaagggtaaggtgccatcacacatttcttca gtcctggatatgggtcaaggcattttgcacaatacctctgatctgtatggcctaatcact gagcaattcattaactatgcattggagctctgctatggtgtgcggttcatctcatatact tcaagtgatgatgaaatcatgctgtccttaaatgaggctttcaaatttaaagatagagat gagctaaatgttgacctggtgttagattgtatggagtttcactactttttatcagacaaa ctcaacaaatttgtgagtcctaaaacagttgtggggacctttgcaagtgaatttaaatcg agattctttatttggtctcaagaagtccccctccttacaaagtttgttgctgcggcctta cacaatataaaggctaaagcacctaaccagcaagcagatacaattgacacaatattagac caatgtgtcgccaatggggtgtcaatagaggttgtgggggccattgcaaagcgaactttc agcatgattatctacagtggatttccaaatgatccattcttgtgcctagaagagatggat gtgctagattgggtcaacgggtcgagagggtacagactccaacgatcaattgaatcattg tttcctgatgatttgctactttcaataattaggaaggcatgcaggaagatattttacaaa atacaatctggagctctggaagaaagttatattgtaacaactcttcagcagtcaccggat gactgtttgaaacagttgttggagacttgtgatgttgagactgaggctattgaagatgct ctagacatcagatggttgaatctaagggttcatggtgatctgaggttggtgcttcggacc aagttgatgagcaccacaagaactgtgcaacgggaagaaatacctagtcttgttaaatcc gtacaatctaaattgtcaaaaaattacgttagaggagccaagaaaattttagctgatgct atcaataaatcagctttccaaagtagtgtggcatcaggattcataggagtctgtaaaagc atgggttcaagatgcgttagagcgaaaagggggattcaaatacatcaggatcacacaggt aagatcaccttacatcgtgattgtcaccactgtaatcagcgcaagggtgtttactgtaaa gcagcacttagtgaagtgagtgagtactccagacctttaatctgggattattttgcactt gtgctgaccaatgcttgtgagctaggcaattgggtgtttcaaaaggctgaagtgccaaag atagtcactcacttaaataaccctaatcacttctggccaataaaaccaagtacacattct gaactagaagacaaggtgggcatcaaccacatactgtactcaatcaggagaaacttcccc acactgtttgatgaacacatatcccccttcttgtctgacttaaacatgttgagactgtca tgggttcagaagataaaatttttagacctttgtgttgcaattgacataacatcagagtgt cttggtattgttagtcacattataaaacatcgtagagaagagttgtatattgtaaagcaa aatgagcttgcaatgtctcacagtagggagtctcacccactagagagggattcaaccttg agccagagagtatgtgcaaactttttaatacaaatcttgttcgagtctatgttggtgcct gtgatcatgtcaacgtctcaatttaaaaagtacttttggttcggcgaagttgagttatta ccaaacaatgcacaacatgatttgaaacaattaacccaatttgtatgtgactgcaaaaag aacaacacctctagaacaatgaatctagatgacttggacgttggctttgttagcagcaac ctgattttgtcctgtgccaatttgaatattagtgtattcattaatgaacttgactggatg aatagagatgactatgagaatatggagcaacacatcttagcatcaccctcggaaatcatc cctattgagctcaacttgacattctcgcataaaagggtgagtcacaaatttagatatgag aggtccaccaattacatattaaaactaagatttcttattgaaaggggttcattgctggat tcattagactgtgatggctatctactgttgaagcctcattctgtcgagtactatgttctc aatcctctgaaatcacataagcttgatggtgtgtcacttttagttttaaatcctctcatc aacgggaaagatgtgttagactttaatgatttgttagaagatcaagatgttcgtttcaag tcaaggtcagctgtattccagaaagtaaaactagatatgaaagactacttcaaggacctg aagaacaagttttcttataagttgattggtcctgatgttgggatgcaacctctgattttg gaaaacgggttgatcaagaaggaacagagtgtttctagattggaagtgaatttggactca aaggtggtcatcattcgactggaagcactggaacctgagaaaaggtcaaagttcattgct aacctcttccaatacctctcaagtgcacagtctcacaataaggggataatcatgactgag caagacctaaggtacatgatcgagaactttcctgaagtcttcgaacatatgttgcatgat gctaaagactggttgaactgtggtcactttagcatagtaaaaagcaaaacactagggacc gtcatgattgcagatgaaaaaggacccttcaagatcaaaggaatcaggtgtcggaaattg ttcgaagacaatgagtcagtggagatcgagtga

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