KEGG   Viruses: 32014164
Entry
32014164          CDS       T40000                                 
Symbol
B7477_gp016
Name
(RefSeq) Columbid alphaherpesvirus 1; capsid portal protein
  KO
K26020  Herpesviridae portal protein
Virus
93386  Columbid alphaherpesvirus 1
SSDB
Motif
Pfam: Herpes_UL6 Nop53
Other DBs
NCBI-GeneID: 32014164
NCBI-ProteinID: YP_009352910
RS: NC_034266
LinkDB
Position
NC_034266:24731..27178
AA seq 815 aa
MSGAAEAARTARNTRTAGANRRRAAATVARGELGCSGGFPAYPQEGKRLKRSGEVIINES
RPVATICGSQDDEVSEWVLIHPTPRTQLFKEILMGEFGYTDGQGIYNSVRSTETAIRQIQ
ATILTNTLGAARYEDLRRDWNRHARARGLDAATIAAVYGVHSEGEAARVAQRVFDTWRQT
LQVALLDLVRSVTACFSSTEPDSAASFSKYIDWICCLGLVPMLRKDVDSDKKRDGPKEGC
VDSLVRGDGGRIRGTGNGAENDEVVARDNLAVAGSVLDRGKIVAAELAACVESVTIMDYD
RAAIEYNFTKREVRVTDRVTGERGECMVLWRPVVRDGGVIFDSPLQRLYREVMACHELRR
HVNVCRLLNTAPIKVLLARRAEEERGLAGAQRAVERALGDQTESAAGSAAARLVKLIINM
KGMKHVGDITETVREYLEETGGYLLDSSSVDMSQAGFGRTNARGGQSGLGQQGQGGVRDA
FHASVVNSINGMLEGYVNKLFGTVEGLKAANEDLTARLRIKEMELARARRAEVGARQAEA
DARRHAALPSSGRSTIDDPIAVAAAVREMGHDVIDVGRDMNDDTYVANSFQSRFVPSYDG
DVARLSGLWEQELVRCFKMTRVTNNQGQEMSVSYSNSAITLLVAPYFFSVLRVRRLGFLV
TNQEAYRSEEELCAAIFKKTRLDIYLDDLAALFVADVRRTVAERHAALEEARPSGEGEDS
RIADSEGESESSSDSEEDGGDGSNGRDDGALTPPPARRERDVRRPRHKRQQRRGLYRQNR
RRPKLANDRAHDVRNPRGPGAAEPLHRRFRGQPPC
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtcgggtgcagccgaagcggctcggaccgctcgcaataccaggaccgccggcgcgaac
cgtcgccgggctgccgcgacggtggcgcgaggagagctgggctgctctgggggcttcccg
gcttatccgcaagagggcaaacgcctgaagcggtcgggagaggttattataaacgaatcc
cgccctgtagctacgatatgcggaagccaggatgacgaggtgtccgagtgggtgctgatt
caccccaccccccgcacccaattgttcaaggagatcctgatgggcgaatttggctacacc
gacggccagggcatctacaactcggtgaggtcgacggaaacggccatccggcagatccaa
gccaccatcctgaccaacacgcttggggcggcccgctacgaagacctgcgccgggactgg
aacaggcacgccagagccaggggactggacgccgcgaccatcgccgccgtgtacggcgtg
cacagcgagggcgaggcggcgcgcgtcgcgcagcgcgtgttcgacacgtggcgccagact
ctgcaagtggccctgctcgacctggtcaggagcgtgacggcctgcttctcgtccaccgaa
cccgacagcgccgcgagcttctccaagtacatagactggatatgctgcctggggctggtg
cccatgctgcgcaaggacgtggactccgacaagaagcgcgacggccccaaggaaggatgc
gtggattccctcgtccgcggggacggcgggaggatacgagggaccgggaacggcgcggag
aacgacgaggtggtcgcgcgcgacaacctcgccgtggcgggcagcgtgctggacagggga
aagatagtggccgcggagctggccgcctgcgtcgagtccgtcaccatcatggactacgat
agggcggccatcgagtataacttcaccaaacgggaggtgcgcgtcaccgacagggtgacg
ggggagcgcggggagtgtatggtcttgtggcgaccggtcgtgcgcgacgggggagtgata
ttcgactcgcccctccagagactgtaccgagaggtcatggcgtgccacgaactccgacgg
cacgtcaacgtatgccgtctgctcaacacggcgccgatcaaggtgctcctggcgagacgc
gccgaggaggagcggggactcgcgggagcccagagggccgtggagcgcgcgctgggtgac
cagacggaatcggcggccgggtcagccgccgcgaggctggtcaaactgatcattaacatg
aagggcatgaaacacgtgggtgacataacggaaacggtgcgggagtacttggaggagacg
ggggggtacttgctggactcgtcgtccgtggacatgtcccaggccggctttggtcgaacc
aacgccagagggggccagtccgggctcgggcagcagggtcagggaggggtcagggacgcg
tttcacgcctccgtggtcaacagcatcaacggcatgctagaaggttacgtgaacaagctg
ttcggtacggtggagggcctgaaagccgccaacgaagacctcaccgcgcggctgaggatt
aaggagatggagctggccagggcgcgtcgtgctgaagtgggagcccggcaggccgaagcg
gacgccagacgccacgcggcgctgccttcctcgggacggtcgacgatcgacgatcccatc
gccgtggccgcggccgtgagggagatgggccacgacgtgatagacgtcggccgagacatg
aacgacgacacgtacgtggctaatagcttccagtcgaggttcgtgccgtcgtacgacgga
gacgtcgcgcgcctgtccggtctgtgggagcaggagctcgtgcggtgcttcaagatgacc
cgagtcaccaataaccagggccaggaaatgtccgtgtcgtactcgaacagcgccatcacc
cttctggtggccccgtacttcttctcggtcctgagggtgcgacgcctcggtttcctggta
acgaaccaggaggcgtacagatcggaggaggagctttgcgcggcgatcttcaagaaaacc
cgccttgatatatatttagacgatctggccgctcttttcgtagcagacgtacggcggacc
gtcgccgaacggcacgcggcgctagaggaagcgcgccctagcggcgagggggaggacagc
cggatcgccgatagcgaaggcgagtcggagtcctcgtccgactccgaggaggacggtggc
gatggaagcaacggacgagacgacggagcacttactcccccacccgctagacgcgagcgc
gacgttagacgccctcgtcataagcgccagcagcgaagaggcctctaccgacaaaatcgt
agaagacctaagctggcaaacgatcgtgcgcatgatgtgcgaaatccgagaggtcccggg
gctgccgagccgcttcaccggcgcttccgtggtcaacctccgtgttga

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