Viruses: 32014217
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Entry
32014217 CDS
T40000
Symbol
B7477_gp069
Name
(RefSeq) Columbid alphaherpesvirus 1; helicase-primase primase subunit
Virus
93386
Columbid alphaherpesvirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL52
Motif
Other DBs
NCBI-GeneID:
32014217
NCBI-ProteinID:
YP_009352963
RS:
NC_034266
LinkDB
All DBs
Position
NC_034266:123339..126701
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AA seq
1120 aa
AA seq
DB search
MAGDDVYGRSLEYDAVDVDDVEPCIKVLFAVDGCAVSFSLRLLADLTVGGVLYVISYWDE
SGSVERYLALEGSRDDAAENGLETARESEEKSDGCASYTAGHRQAPRLHLPTTQKVEFCL
LDQMTSGEGGVGPKARTRTIFVCRFTSDAALGALYTALTRGEPLPVEVLRETLDDEATYA
LHNDFNIALCAAIGDITPRKGKTTKTATVAGPDMVSLKTMVRNFPLGRRGMASLYIQHEQ
RVVAAYRRAYGGSTSTAFWYVSKFGPGEKTLVLATRYYLLQAQDAPSGVGTGYDLQAIKD
LCLTYDVSVCPNPTGFCPADLTSFARLSRFCCSSGYARGTVAAWFGEYIERRILADVSEV
GALREFIERDRSGLRISDDDFIKYVYLAHFECYNREQLRRHLRAVTVTTPTESIHGRSSL
GTYAINEFFTHVRAQLNIEHYVECNVRPVVVEIDETLARLYIAARAYCAEATRRDMPVVG
VYECATQLTKRLSKVEAALEKHGWPSLSMQQANRNCSLSQDGGCPETPTEVPSDLSGQVR
TGGKEPANADSRPMIVKRLLAMISADVRPDLTSVGAILTGAPSLRGPAPIYRTAMAHGRQ
AFGAVVSDAWWRSIPEPAKAVALLDALDLSGIDDAAEKDAVVTLELGRGLAGDVSDPPRL
AGGSVGDQKYVNRNEIFNANLAVGHIILDLDMHLRMCVPRRVLHTAARGLRRGALTALRL
VMPDATVNWATHPCYFYKSECPRKRDAEEPEFGNWEAGLCEAERMERAWAGHDDSSGWTE
PQSCQDPYDDFMDDSAFWDAFNAPEAAPTAPPQGDAHRSPSRRDIELPCNCERKIGMRVS
IPTPRPYVLSGARTLSGLARVIQQAVLLERTFVEAIGPYLKDYDLVDIGVYGHGRSLRLP
FFSKIADDGSVGNRFAPFYVIPDGCEDVKAFVAAHFEPRNFHFHSTSPDNELPRIIMSEL
GGDYTSFFDKKTAINRDRYFGRKPTLAATLSEIGLYPNEPASVEEFVNTTVLTGISSYMD
AHFQEHAREYKDIVSSCKVLRSDWILLQLLPSRSLYGRQGFTCVRYKHSRAASRESVRTF
LALSVDAHGRLCASLSQQCFATKCGNNKLRTLFTIDVGGQ
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggccggagacgacgtctatggcaggagtctcgagtacgatgccgtcgacgtggacgat
gtcgagccgtgtatcaaggtcctctttgccgtagacggctgcgcggtatccttttcgctc
aggctactggccgaccttacggtcggaggagtgctgtacgttatcagctactgggacgaa
tccggctccgtcgaacgatacctcgccctcgaggggtcgcgcgacgacgcggcggaaaac
gggcttgagactgcacgggagagtgaagaaaaaagcgacgggtgcgcttcatataccgcc
ggccaccggcaggcaccgcgccttcatctgccgacgactcagaaagtggaattttgtctc
ctcgaccagatgacgtcgggcgagggcggagtgggacccaaggctcgcaccaggaccatc
ttcgtctgtcgctttaccagcgacgcggcattgggggcgctatacaccgctctgacccga
ggcgaaccgctgccggtcgaggtgctgcgcgagacgctcgacgatgaggcgacctacgct
ctgcacaatgacttcaacatcgccctgtgcgccgccatcggagacattacgcccaggaaa
ggcaagaccaccaaaaccgcgaccgtcgccggcccggacatggtatcgctcaaaacgatg
gtgcgaaactttcctctgggccggcgcggcatggcatcgttgtacatacaacacgagcaa
agggtcgtcgcggcatacaggcgggcgtacggaggctcgaccagcaccgctttttggtac
gtgtcaaagttcgggcccggcgaaaagaccctcgtcctggccaccaggtactacttgctg
caggcccaggacgccccttcgggggtcggcaccggctacgacctgcaggccattaaagac
ctgtgcctgacctacgacgtgtcggtctgccccaaccccaccgggttctgccccgcggac
ctcacgtccttcgcgcgcctctcgcgcttctgttgttccagcgggtacgcccgcggcacc
gtcgccgcgtggttcggcgagtacatagagcgccgcatcctcgccgacgtctcggaagtg
ggcgccctcagggagtttatagagagagataggagcggcctgcggatatccgacgacgac
tttatcaagtacgtgtacctggcccattttgagtgctataaccgcgaacagctgaggcgt
catctcagggcggttacggtaaccaccccgaccgagagcatccacggccggtccagcctc
gggacgtacgccatcaacgagttttttacgcacgtgcgggctcagctgaacatcgagcac
tacgtcgagtgtaacgtgcgccccgtggtggtggagatagacgaaactctggccagactg
tacatcgccgcgcgggcctactgcgcggaggccacgcgcagagatatgcccgtggtcggg
gtgtacgagtgcgccacccagctgaccaaacgactttctaaagtcgaggcggcgctggag
aagcacggatggcctagcctgtccatgcagcaagcgaaccgcaactgctcgctgtcgcag
gacgggggctgcccggagaccccgaccgaggttccgtcggacttgagcgggcaggttagg
accggcggcaaggagcccgcgaacgcggactcccgccccatgatagtaaagcggctcctg
gccatgatatccgcggacgtgcgacccgacctcacgtccgtgggggccatcctgacgggc
gcgccgagcctgcggggaccggctcccatctaccgcacggccatggcccacggcaggcag
gcgttcggggcggtagtatccgacgcgtggtggcgctcgataccggagcccgcgaaggcg
gtcgcgctcttagacgccctggacctgtcggggatcgacgacgcggccgagaaggacgcg
gtcgtgacgctggagctagggagaggcctggccggggacgtcagcgaccccccgaggcta
gccggcgggtcggtgggcgatcagaagtacgtcaaccgcaacgaaattttcaacgccaac
ctggcggtagggcacatcattctggacctcgacatgcacctgcgtatgtgcgtacccaga
cgcgtcctccacaccgcagctcgcggtctgcgccgcggcgcgctgacggccctgcggctc
gtcatgccggacgcgacggtgaactgggccacccatccctgctatttctacaagagcgag
tgccccaggaaacgggacgcggaggagcccgagtttggaaactgggaagcggggctgtgc
gaggccgagcgcatggaacgcgcgtgggcgggccacgacgattccagcgggtggaccgag
ccccagtcgtgccaagacccctacgacgacttcatggacgattcggcgttctgggacgcc
ttcaacgcgcccgaggccgcccccacggcgccgccccagggggatgcgcaccgatcaccc
tccagacgggatatcgaactgccctgtaactgcgaacggaagataggcatgcgcgtgtcc
atccccacgcccaggccgtacgtgctgtcgggcgccaggaccctgagcgggctggcccgc
gttatacagcaggcggtgcttttagagagaactttcgtcgaggccataggaccctatctc
aaagactacgatctcgtagacataggcgtctacgggcacgggagaagcttgcggctgccg
ttctttagcaaaatagcggacgatgggtccgtcgggaaccgcttcgcgccgttctacgtg
atcccggacggctgcgaggacgtgaaagcgttcgtggcggcccacttcgagccgcgcaat
ttccacttccactccacgtcccccgataacgagctcccccgtataatcatgagcgaactg
gggggcgattacacgagcttctttgacaaaaagacggccatcaaccgcgatcggtatttc
ggtcgcaagcccaccctggcggccaccctgtcggaaattgggttgtatccaaacgaacca
gcgtcggttgaggaattcgtcaacacgacggttttgacgggcataagctcttatatggac
gcccatttccaagagcatgcgcgcgaatataaagatatagtctcgtcctgtaaagtgctt
agaagcgattggattctcctacagctactcccgtccagatccctgtacgggcgccagggt
ttcacttgcgtcagatacaagcactcgcgcgccgcgtccagggaatcggtgcgcacgttt
ctcgcgctgagcgtggacgcccacgggcgcctgtgtgcatcgctcagccagcagtgcttc
gcaaccaagtgcggcaataacaaactgcgcaccctgtttacgatcgacgtcggaggacaa
tga
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