Viruses: 32283033
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Entry
32283033 CDS
T40000
Symbol
RdRp, B9L41_gp1
Name
(RefSeq) Cassava virus X; RNA-dependent RNA polymerase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
1977392
Cassava virus X
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
AAA_16
T2SSE
Motif
Other DBs
NCBI-GeneID:
32283033
NCBI-ProteinID:
YP_009357226
RS:
NC_034375
UniProt:
A0A1W5VPI1
LinkDB
All DBs
Position
NC_034375:85..3999
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AA seq
1304 aa
AA seq
DB search
MARVRAVLDSLTDVTVKASLQEETLSRIRPVMRAAAIINPYSVPNEAADALETMGILSDP
FSVDLHPHAGCKAIENKLLDIVGKLLRDEKVTTYFFLKKSKRNNLKRHSNKDIFQNKWLE
PRDFSRYPPDSVVPRFNLVETPTAYISDSLHFMSQKSLLDMFDNCPVLQTVYATIVLPPE
ALFKHRSLEPALYSINYNYGGFQYLPGGHAGGSYSHEFNQLDWLKVGTIRYNDDRPESTI
ITAQMLESMGANHLFVFSRGKLLTPRVRTFRADEMVYLPQIFHPKELNTTQPIKKTLAMQ
LLLYAKSLKTVTLTDIVAKIRQLIQTKDLANYDPDEIVHLANYFFFTAKTSMLNSYDDIL
SLDCLSQIMLPIKSRLVKLKERLTGASPFRQFLKALEWTTMTYAVEVEDVVVTIPLTDHP
WPVDERPPEESDDEKEGSEDSKDEKPDRSETSKQKQDVGSSTAPPQPVVPWAEHLDILNK
HGFRGNEIQLHDGGVVIPILDINSKLPIARAPDNNHVPWPLIRKLKMINRMPTMVPILSS
RAAPYASDIKNNRVGAYYRKIPQLWRDKLSLDCEGADFEFPMSVIHGAGGSGKSQHLQEW
LTTLPRDYKGVVVVLPTVELRTDWVRKVPTLDNRVFKTFEKALERSYGTVVIFDDYGKLP
AGYIEAFLYAHRCFELAILTGDPSQAVHHEPNLQASSYTTTPGIDYFAAYSRFYINATHR
NRKDLANALNVYSEKEGTTAIHYSSNVVEGQAVLCPTTIKQKALQELGHKALTYSSCQGL
TAPKIQILLDSSTPQCSSRVMYTALSRATDSICFINTSRTTNDFWDKLNATPYLKTFIES
IKDQAAPEERAPEPEITEVMPATHFPPTNTSVILEDLIEELPEKHAREIYASSSGYSNAV
QTEDRVVQLFPHQQAKDETLLWATIAARLSISTPQQNLKELALKKDIGDILFFNYKEAMG
LPSEPIPFNQDLWRAARTEVEKTYLQKPVAMLINALTRQSPDFPRDKISLFLKSQWVKKT
EKLGCIKIKPGQTIASFMQEVVLLFGTMARYMRRMRQAYQPPNILINCEVTPADLNEFIS
ERWCFTRPSHENDFTAFDQSQDGAMLQFEPMKAKFHNIPEDVIEGYKQIKTNASIFLGTL
GIMRLTGEGPTFDANTECSIAYHHTRFQVTPGSAQLYAGDDMAQDSIPMEKPSFSLLRGR
LALDAKPIIRNQKPGDFASFCGWRITPLGVIKDPLKQLAGLELAERTGKIKETALSYAHD
THYAYRHSDRLHEIFTEREGELHQAVVRKLHLHHVGDALAKGPT
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtgcgtgcagtgttagactccttgacagatgttaccgtgaaagcttctcta
caagaagaaacactttccagaattcgtcctgtgatgagggccgcagccataattaatccc
tatagtgtgcccaatgaagctgcggatgccctcgagaccatgggtatcctatcggaccca
ttctccgtcgacctgcacccacacgcaggctgtaaagcgatagaaaataaattattagat
atagtaggtaaattacttagggacgagaaagtgaccacttacttttttttgaaaaagagt
aagaggaataatctaaaaagacattccaacaaagacatattccaaaataagtggttggag
cctagggacttttctcgttatcccccagatagtgtagtgcctagattcaatttggtggag
acaccaactgcatatattagtgatagtttacattttatgtcccaaaagagtctgctagac
atgttcgacaactgtccagtcttgcagactgtgtatgctactatagtactcccgccggag
gcgctcttcaaacatcgatccttagagcctgccctttactcaataaattacaattacgga
ggattccaatatcttcccggcgggcatgctggaggctcgtactcccatgaattcaaccaa
ctagactggttgaaagttggtactataagatataacgatgatcgacccgaatccacgatc
atcaccgcacaaatgcttgaaagcatgggggcgaaccacctctttgtattttcccgtggt
aagcttttgaccccccgagtgcggaccttcagggctgacgaaatggtgtatctgcctcaa
atcttccatccgaaggaactcaacaccacgcagccaatcaagaagactctagccatgcaa
ctcctactatatgctaagagtctgaagacagtcactttgactgacatagtagccaaaata
aggcaattaatacaaacaaaggatctggctaactatgaccccgacgaaatagtccacttg
gctaactacttcttcttcacagccaagacatctatgctcaattcatacgatgacatttta
tctttggactgtttgtctcagataatgcttccaattaagtctagattagtgaagctaaag
gagaggttaactggcgcctcacccttccgccaattcttaaaggcccttgaatggacgaca
atgacctatgccgtagaggtcgaagatgttgtggtcaccataccattgactgaccaccct
tggcccgtggacgaacgtcctcctgaggagtctgatgatgagaaggaagggtccgaggac
tcaaaggatgagaagccggataggtctgagacttccaaacaaaaacaggacgtcgggtcc
tcgacagctccgccacaaccagtagtcccctgggctgagcaccttgatatactgaacaag
catggcttcaggggcaatgaaatccagctacacgatgggggtgtagttatacctatactg
gatatcaactcaaaactccccatagctcgggcaccagacaacaatcatgtcccatggccg
ttaatcagaaaattgaaaatgatcaaccgcatgccaacaatggtgcccatcctctctagt
agagctgctccctacgcttcagacattaagaacaaccgcgtcggagcctactacaggaaa
atcccccaactatggcgcgacaaactctcactagattgtgaaggtgccgactttgaattt
ccaatgtccgtcatacatggagctgggggctcaggcaagagtcaacacttacaggaatgg
ttgaccactctgcctcgagactacaagggtgtagtagttgttttaccaactgttgaacta
cgcaccgattgggttcggaaggttcccacacttgacaatagagttttcaagaccttcgag
aaggccttggaacgatcctatggcaccgtcgttatcttcgatgactacggaaaacttccc
gccggctatattgaggcattcctgtatgcccacagatgttttgaacttgctatactgacc
ggtgatccctcgcaagctgtccaccatgagcccaatctgcaagcctcctcatacaccaca
actcccggcattgattactttgcagcctacagccgcttttacatcaatgccacacacagg
aataggaaggacttggccaatgcccttaatgtttattctgaaaaagagggcacaactgcc
attcactactcatccaatgtcgtcgaaggacaagcagttttatgccccaccacaattaaa
cagaaggctcttcaagagctagggcacaaggcgctcacctactcctcttgccaaggactg
acagccccaaaaatccaaattctacttgactctagcacccctcagtgctcctccagggtc
atgtacactgccctgtcccgtgctacagactcaatatgtttcatcaacaccagccggaca
acaaatgacttctgggacaagctcaatgccaccccttatctcaaaactttcattgaaagc
atcaaagaccaggctgctcctgaagagagagcccctgaacctgagataacggaggttatg
ccagccacccattttccacccaccaatacatctgtcatattggaggacctcattgaagaa
ttaccagagaaacacgctagagagatatatgcgtcaagcagcggctattccaatgctgtt
cagactgaggatagagttgttcaactcttcccacatcaacaggctaaggatgaaacactc
ctctgggccacgatagccgccagactatctatctctactccgcaacaaaatctgaaagaa
ttagctttaaagaaagacattggcgacattctcttcttcaactacaaggaagcaatgggg
ctaccatctgaaccgatccctttcaatcaagatctctggagggcggccagaactgaggtg
gagaaaacatacctccagaagccagtagcaatgctcatcaatgcattgactaggcagtca
cctgacttcccacgtgacaaaatatctctttttctgaagtcacagtgggtcaagaaaact
gagaagttgggttgcatcaagattaagcctgggcagactatcgcctcatttatgcaggag
gttgtcctgctctttggcaccatggctcggtacatgcgcagaatgagacaagcataccag
ccccccaacattctcatcaattgtgaagtcactccagccgatctaaatgaattcatttcg
gaaaggtggtgcttcactaggccgtcacatgaaaatgactttacggccttcgaccagtcc
caggatggagctatgctccagtttgagccaatgaaagcaaaattccacaacattcctgag
gacgtgatagagggctacaaacagatcaaaaccaatgcctctatctttcttggcactctt
ggcatcatgcggttaactggcgagggccctaccttcgatgctaataccgagtgctccata
gcctaccatcacaccaggtttcaagttacccctggttccgctcaactctacgcgggtgat
gatatggcccaagactccatacctatggaaaagccctccttctcattgctgagaggccga
ctagctctagacgctaagccaatcattcggaatcaaaagcctggcgactttgctagcttc
tgcggctggcgcataactccacttggtgttattaaagatcccttgaaacaattagcaggc
cttgaactggccgagcgaacagggaagattaaagaaacagccctctcttatgctcacgat
acacattatgcttaccgacactctgatcggttgcatgaaatatttactgaaagagagggt
gaacttcaccaagccgttgtccgcaagttgcatctccaccatgttggggatgctttggct
aagggccccacttaa
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